CX290584

Overview
NameCX290584
Unique NameCX290584
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length656
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: APG_BRANA (Anther-specific proline-rich protein APG (Fragment) OS=Brassica napus GN=APG PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.410e-17
Identity = 53/190 (27.89%), Postives = 90/190 (47.37%), Query Frame = 1
Query:   16 KISNPALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVNGECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIAS-NLCPNRDLYAFWDPFHPSEKATESSFSEL 582
            KI +    ++  G ND +  Y+     A+  +  +  +   +       + ++Y  GARR+ V GT P+GC P++  ++     C+ +L  AA LFN +LV +L +L+  + +   V  + +++    +  P+ YGF   K  CC  G   G   C   +     N   Y FWD  HPS++A E S  +L
Sbjct:  256 KIVSKGAAIVVAGSNDLIYTYF--GNGAQHLKNDVDSFTTMMADSAASFVLQLYGYGARRIGVIGTPPIGCTPSQRVKK--KKICNEDLNYAAQLFNSKLVIILGQLSKTLPNSTIVYGDIYSIFSKMLESPEDYGFEEIKKPCCKIGLTKGGVFCKERTLKNMSNASSYLFWDGLHPSQRAYEISNRKL 441          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GRIP4_ARATH (GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.841e-17
Identity = 54/191 (28.27%), Postives = 86/191 (45.03%), Query Frame = 1
Query:   16 KISNPALVLITLGGNDFVNNYYLVPFSARSRQFSLPD---YVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVN-GECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIAS------NLCPNRDLYAFWDPFHPSEKA 558
            ++ + A+ L  +G ND     Y  PF A +  FS      ++ ++I     ++  +Y+LGAR+      GP GC P+ L       G C   +    +L N +  ++L  L  ++    +   +        I++P  YGF   ++ACCG GP  GI  C   +       LC N D Y F+DP H +E A
Sbjct:  165 RVISKAVYLFHIGAND-----YQYPFFANTSTFSNTTKERFIDFVIGNTTTVIEELYKLGARKFGFLSLGPFGCTPSALIINSTKIGSCFEPVTELINLHNQEFPKVLRRLERRLSGFKYALHDFHTSLSQRINNPSRYGFKEGEMACCGSGPLRGINTCGFRNGPSQGYKLCENADDYVFFDPSHLTETA 350          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GDL5_ARATH (GDSL esterase/lipase At1g23500 OS=Arabidopsis thaliana GN=At1g23500 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.102e-17
Identity = 58/182 (31.87%), Postives = 90/182 (49.45%), Query Frame = 1
Query:   19 ISNPALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVNGE-CSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIASNL-CPNRDLYAFWDPFHPSEKA 558
            ISN A+ LI+ G ND       + +     Q+++  Y   L++    +L  +Y +GAR+  V GT PLGC+P      G  G  C V + + A +FN +L   LN L++ +    FV  + +   ++ I++P+A GF+     CC          C   S + CP+   Y FWD  HPSEK+
Sbjct:  163 ISN-AVYLISAGNNDLA-----ITYPTLMAQYTVSTYTDLLVTWTDNLLKSLYAMGARKFAVLGTLPLGCLPGARHTGGNFGNICLVPINQVAAIFNQKLSAKLNNLHTILPGAKFVYVDMYNPLLNLINNPRASGFIDVADGCC----------CMPTSPVPCPDASQYVFWDFAHPSEKS 328          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GDL81_ARATH (GDSL esterase/lipase At5g41890 OS=Arabidopsis thaliana GN=At5g41890 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.357e-17
Identity = 56/192 (29.17%), Postives = 95/192 (49.48%), Query Frame = 1
Query:   31 ALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVY--LISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGV-NGECSVELQRAADLFNPQLVQMLNELNSQIGSD----VFVAANAFAMHMDFIHDPQAYGFVTSKIACCG---------QGPYNGIGLCTIASNLCPNRDLYAFWDPFHPSEKA 558
            A+  IT+G ND +N  Y+ P      Q  LP  V+   ++      L R+++LG R+ +V G GPLGC+P   A   +  G+CS ++ +    +N +L+  L  LN+++ S+     FV AN++ + +  + + Q +G   +   CCG         +GP         +   C +R  + FWD +HP+E A
Sbjct:  158 AMFTITIGSNDILN--YIQPSIPFFSQDKLPTDVLQDSMVLHLTTHLKRLHQLGGRKFVVVGVGPLGCIPFARALNLIPAGKCSEQVNQVVRGYNMKLIHSLKTLNNELRSEDYNTTFVYANSYDLFLKLVLNYQLFGLKNADKPCCGGYFPPFACFKGPNQ-----NSSQAACEDRSKFVFWDAYHPTEAA 342          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: LIP4_ARATH (GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana GN=LIP4 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.036e-16
Identity = 59/190 (31.05%), Postives = 89/190 (46.84%), Query Frame = 1
Query:   31 ALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVV-YLISEYRKILARIYELGARRVLVTGTGPLGCVPAELA--------QRGVNGECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQG--PYNGIGLCTI---ASNLCPNRDLYAFWDPFHPSEKA 558
            AL +I +G ND   ++      AR   +S    ++  +I+E +  + R+Y+ G RR  +  TGPLGC+P +L+        Q G    C V    AA LFN  L  M  EL +++     +  + +A+    I +   YGF +  +ACCG G  PYN     T     SN+C     +  WD  H +E A
Sbjct:  168 ALYMIDIGQNDIARSF------ARGNSYSQTVKLIPQIITEIKSSIKRLYDEGGRRFWIHNTGPLGCLPQKLSMVKSKDLDQHG----CLVSYNSAATLFNQGLDHMCEELRTELRDATIIYIDIYAIKYSLIANSNQYGFKSPLMACCGYGGTPYNYNVKITCGHKGSNVCEEGSRFISWDGIHYTETA 347          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GLIP3_ARATH (GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=GLIP3 PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 4.535e-16
Identity = 56/191 (29.32%), Postives = 83/191 (43.46%), Query Frame = 1
Query:   16 KISNPALVLITLGGNDFVNNYYLVPFSARSRQF---SLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQ-RGVNGECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLC------TIASNLCPNRDLYAFWDPFHPSEKA 558
            ++ + A+ L  +G ND     Y  PFSA S  F   S   +V ++I     ++  +Y++G R+      GP  C P  L + R   G C   +    D+ N +   +L  L  Q+    +   +      + I+ P  YGF   K ACCG GP  GI  C      +    LC N   Y F+D  H +EKA
Sbjct:  152 RVFSRAVYLFHIGAND-----YFYPFSANSSTFKSNSKEKFVDFVIGNITFVIEEVYKMGGRKFGFLNVGPYECSPNSLIRDRTKIGSCFKPVAELIDMHNKKFPDVLRRLQRQLSGFRYALHDYHTSLSERINSPSKYGFKEGKKACCGSGPLRGINTCGNRIGPSQGYGLCENVTDYLFYDSSHLTEKA 337          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: EXL6_ARATH (GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana GN=EXL6 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.923e-16
Identity = 63/186 (33.87%), Postives = 89/186 (47.85%), Query Frame = 1
Query:   16 KISNPALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQ-RGVNGECSVELQRAADLFNPQLVQMLNE--LNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIASNLCPNRDLYAFWDPFHPSEKATE 564
            +I + A+ LI+ G ND    Y++ P  A  R  S   Y   ++   RK L  +Y+LGAR+  V G  P+GC+P   A   GV G C+  L R  + FN +L + L    +        FV  + +   MD + +P AYGF  +K ACC             A   C + D Y F+D  HPS+KA E
Sbjct:  156 EIVSNAVFLISEGNNDL--GYFVAP--ALLRLQSTTTYTSKMVVWTRKFLKDLYDLGARKFAVMGVMPVGCLPIHRASFGGVFGWCNFLLNRITEDFNMKLQKGLTSYAVEYDFKDAKFVYVDIYGTLMDLVKNPMAYGFTEAKKACC---------CMPNAIIPCFHPDKYVFYDFAHPSQKAYE 328          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GDL47_ARATH (GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana GN=At2g40250 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.319e-15
Identity = 48/188 (25.53%), Postives = 87/188 (46.28%), Query Frame = 1
Query:   16 KISNPALVLITLGGNDFVNNYYLVPFSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRGVNGE-------CSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIASNLCPNRDLYAFWDPFHPSEKA 558
            ++   A+ +I+ G ND + N Y           S+ DY   L+++    + R+YE GARR+ + G  P+GC+P ++    +N         C+      + ++N +L +++  L+ +      +  + ++  +D I  P+ YG   +   CCG G      LC   S  C +   Y F+D  HPS+ A
Sbjct:  161 RVIKNAVFVISAGTNDMIFNVY---DHVLGSLISVSDYQDSLLTKVEVFVQRLYEAGARRITIAGLPPIGCLPVQVTLTSINTPRIFHHRICTEHQNDDSRVYNQKLQKLIFGLSQRFRGSKVLYLDIYSPLIDMIKHPRKYGLEETLRGCCGTGLLEAGPLCQPLSRTCDDVSKYLFFDSVHPSQTA 345          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GDL26_ARATH (GDSL esterase/lipase At1g59030/At1g59406 OS=Arabidopsis thaliana GN=At1g59030 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.319e-15
Identity = 51/176 (28.98%), Postives = 80/176 (45.45%), Query Frame = 1
Query:   40 LITLGGNDFVNNYYLVPFSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRG--VNGECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIASNL-CPNRDLYAFWDPFHPSEKA 558
            L+    ND  + Y      A++ ++    Y  +L       +  +++LGAR++ V    P+GCVP +    G      C+  L   A  FN +L   L+ L+ ++   V +  N +    D I  P+ YGF  +   CCG+G      LC   +   C N   Y FWD +HPSE+A
Sbjct:  163 LVVSSSNDLAHTYL-----AQTHRYDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNQPLNNMAKQFNARLSPALDSLDKELDG-VILYINVYDTLFDMIQHPKKYGFEVADRGCCGKGLLAISYLCNSLNPFTCSNSSAYIFWDSYHPSERA 332          
BLAST of CX290584 vs. ExPASy Swiss-Prot
Match: GDL25_ARATH (GDSL esterase/lipase At1g58725 OS=Arabidopsis thaliana GN=At1g58725 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.319e-15
Identity = 51/176 (28.98%), Postives = 80/176 (45.45%), Query Frame = 1
Query:   40 LITLGGNDFVNNYYLVPFSARSRQFSLPDYVVYLISEYRKILARIYELGARRVLVTGTGPLGCVPAELAQRG--VNGECSVELQRAADLFNPQLVQMLNELNSQIGSDVFVAANAFAMHMDFIHDPQAYGFVTSKIACCGQGPYNGIGLCTIASNL-CPNRDLYAFWDPFHPSEKA 558
            L+    ND  + Y      A++ ++    Y  +L       +  +++LGAR++ V    P+GCVP +    G      C+  L   A  FN +L   L+ L+ ++   V +  N +    D I  P+ YGF  +   CCG+G      LC   +   C N   Y FWD +HPSE+A
Sbjct:  163 LVVSSSNDLAHTYL-----AQTHRYDRTSYANFLADSAVHFVRELHKLGARKIGVFSAVPVGCVPLQRTVFGGFFTRGCNQPLNNMAKQFNARLSPALDSLDKELDG-VILYINVYDTLFDMIQHPKKYGFEVADRGCCGKGLLAISYLCNSLNPFTCSNSSAYIFWDSYHPSERA 332          
The following BLAST results are available for this feature:
BLAST of CX290584 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
APG_BRANA1.410e-1727.89Anther-specific proline-rich protein APG (Fragment... [more]
GRIP4_ARATH1.841e-1728.27GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=... [more]
GDL5_ARATH4.102e-1731.87GDSL esterase/lipase At1g23500 OS=Arabidopsis thal... [more]
GDL81_ARATH5.357e-1729.17GDSL esterase/lipase At5g41890 OS=Arabidopsis thal... [more]
LIP4_ARATH2.036e-1631.05GDSL esterase/lipase LIP-4 OS=Arabidopsis thaliana... [more]
GLIP3_ARATH4.535e-1629.32GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=... [more]
EXL6_ARATH5.923e-1633.87GDSL esterase/lipase EXL6 OS=Arabidopsis thaliana ... [more]
GDL47_ARATH1.319e-1525.53GDSL esterase/lipase At2g40250 OS=Arabidopsis thal... [more]
GDL26_ARATH1.319e-1528.98GDSL esterase/lipase At1g59030/At1g59406 OS=Arabid... [more]
GDL25_ARATH1.319e-1528.98GDSL esterase/lipase At1g58725 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC02025G08SK IF1 Citrus clementina cDNA clone C02025G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290584 ID=CX290584; Name=CX290584; organism=Citrus clementina; type=EST; length=656bp
AGCTGAGCAGACTGAAAGATTAGTAACCCAGCACTTGTCCTAATTACGCT
TGGGGGCAACGACTTTGTTAACAACTACTACTTGGTGCCGTTTTCTGCAA
GATCTCGCCAATTTTCTCTTCCAGATTATGTTGTGTATCTAATCTCAGAG
TATCGCAAAATTCTGGCGAGGATATATGAACTTGGCGCCCGTAGGGTTTT
GGTGACGGGCACAGGACCATTGGGTTGCGTCCCAGCAGAGCTTGCACAGC
GTGGCGTAAATGGTGAATGTTCAGTAGAACTGCAACGGGCAGCTGATTTG
TTCAACCCACAACTCGTTCAAATGTTAAATGAACTCAATAGTCAGATCGG
ATCTGACGTTTTTGTTGCTGCTAATGCCTTCGCAATGCACATGGATTTCA
TCCATGACCCTCAAGCTTACGGATTTGTTACCTCAAAAATAGCATGTTGC
GGACAAGGACCCTACAATGGCATAGGCCTCTGCACAATTGCATCAAACTT
ATGCCCCAACAGGGATTTGTACGCGTTTTGGGATCCGTTCCATCCATCGG
AGAAAGCAACAGAATCATCGTTCAGCGAATTGCGTCTGGCTCAAGCAAGT
ACATGAACCCAATGAATCTCAGCACCATTATGGCTTTAGATTCAAGGGTC
TAATTT
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