CX290598
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290598 vs. ExPASy Swiss-Prot
Match: PSB6_BOVIN (Proteasome subunit beta type-6 OS=Bos taurus GN=PSMB6 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.111e-15 Identity = 60/196 (30.61%), Postives = 91/196 (46.43%), Query Frame = 1 Query: 7 GDTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKK--LSGDDV 585 G T +A F GV++ ADSR + G YI+++ K+ I+ + +G AAD Q + + H + V A+ L + Y YR L G +IAGWD G Y GG + F++ GSGS Y YG +D+ Y+ M+ + A RD +SGGV + + G ++ L GD + Sbjct: 34 GTTIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTYQLGFHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQPFAIGGSGSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAEPGVERQVLLGDQI 228
BLAST of CX290598 vs. ExPASy Swiss-Prot
Match: PSB9_ORYLA (Proteasome subunit beta type-9 OS=Oryzias latipes GN=psmb9 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.370e-15 Identity = 58/196 (29.59%), Postives = 96/196 (48.98%), Query Frame = 1 Query: 7 GDTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGW--KKLSGDDV 585 G T +A F GV++ +DSR S G + ++ + K+ ++ + ++G AAD Q + + +H L V A+ L+ NI Y Y+ LS ++AGWD G + + GG L F++ GSGS Y YG +D+ Y+ M+ + A RD +SGGVA + + + K + G+D+ Sbjct: 18 GTTIIAIEFNGGVVLGSDSRVSAGDSVVNRVMNKLSPLHDKIYCALSGSAADAQTIAEMVNYQLDVHSLEIDEDPQVRSAATLVKNISYKYK-EELSAHLIVAGWDRRDGGQVFA-TLGGLLTRQPFAIGGSGSSYVYGFVDAEYRRGMTKEECQKFVVNTLALAMNRDGSSGGVAYIVTIDEHSTDEKVILGNDL 211
BLAST of CX290598 vs. ExPASy Swiss-Prot
Match: PSB9_MUSDU (Proteasome subunit beta type-9 OS=Mus dunni GN=Psmb9 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.159e-15 Identity = 58/175 (33.14%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 7 GDTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGV 528 G T +A F GV+V +DSR S G + ++ K+ ++ + ++G AAD Q + LH L + V A+ ++ NI Y YR L ++AGWD+ G Y + GG L F++ GSGS Y YG +D+ YK M+ I A RD +SGGV Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGAAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQVY-GTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGV 192
BLAST of CX290598 vs. ExPASy Swiss-Prot
Match: PSB6_SCHPO (Probable proteasome subunit beta type-6 OS=Schizosaccharomyces pombe GN=SPBC4C3.10c PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.159e-15 Identity = 55/188 (29.26%), Postives = 93/188 (49.47%), Query Frame = 1 Query: 7 GDTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNGWKK 567 G T A +K+GV++AADSR +MG YI+++ K+ ++ + +G AAD Q L ++ + SV A+ L + + Y + M LS G ++AG+DE G Y GG L ++ GSGS + YG D+ ++ +M+ + A RD +SGG + + +G ++ Sbjct: 24 GTTITALRYKDGVILAADSRTTMGAYIANRVTDKLTQLTDNIWCCRSGSAADTQTVADLLKYYLSMYRIQFGHDPSVHTAATLASEMCYQNKNM-LSAGLIVAGYDEKTGGDVYSIPLGGSLHKQPLAIGGSGSAFIYGFCDANFRENMTQEEAVEFLKNAVALAMERDGSSGGTIRMVILNKDGMER 210
BLAST of CX290598 vs. ExPASy Swiss-Prot
Match: PSB6_ARATH (Proteasome subunit beta type-6 OS=Arabidopsis thaliana GN=PBA1 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 9.159e-15 Identity = 52/185 (28.11%), Postives = 87/185 (47.03%), Query Frame = 1 Query: 7 GDTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNG 558 G T + + GV++ ADSR S G Y+++++ KI ++ + +G AAD Q + H + + + +V ++ L+ + Y+ + M L G ++ GWD+ G Y GG + F++ GSGS Y YG D +K +M+ + A RD ASGGV + G Sbjct: 12 GTTIIGVTYNGGVVLGADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADSQVVSDYVRYFLHQHTIQHGQPATVKVSANLIRMLAYNNKNM-LQTGLIVGGWDKYEGGKIYGIPLGGTVVEQPFAIGGSGSSYLYGFFDQAWKDNMTKEEAEQLVVKAVSLAIARDGASGGVVRTVIINSEG 195
BLAST of CX290598 vs. ExPASy Swiss-Prot
Match: PSB9_MUSPL (Proteasome subunit beta type-9 OS=Mus platythrix GN=Psmb9 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14 Identity = 58/175 (33.14%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 7 GDTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGV 528 G T +A F GV+V +DSR S G + ++ K+ ++ + ++G AAD Q + LH L + V A+ ++ NI Y YR L ++AGWD+ G Y + GG L F++ GSGS Y YG +D+ YK M+ I A RD +SGGV Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGEAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQVY-GTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTSEECRRFTTNAITLAMNRDGSSGGV 192
BLAST of CX290598 vs. ExPASy Swiss-Prot
Match: PSB7_DICDI (Proteasome subunit beta type-7 OS=Dictyostelium discoideum GN=psmB7 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14 Identity = 56/186 (30.11%), Postives = 92/186 (49.46%), Query Frame = 1 Query: 7 GDTTLAFIFKEGVMVAADSRASMGGYISSQSVKKI--IEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSVGSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGVASVYYVGPNG 558 G T + ++K GV++ AD+RA+ G ++ ++ +KI I N Y G AG AAD + + K +LH+L+ ++ V A +L +L+ Y+G +S ++ G D GP L+ + G + ++GSGS A V ++ YK DM+ I F D SG V + P+G Sbjct: 34 GTTIVGVVYKGGVVLGADTRATEGPIVADKNCEKIHYIADNIYCCG--AGTAADTESATALISSKLKLHKLSTGKQTRVITALTMLKQMLFKYQG-HISAALILGGIDINGPSLHTIYPHGSTDQLPYVTMGSGSLAAMAVFEAKYKNDMTKEEAIALVAEAISSGIFNDLGSGSNVDVTVIEPSG 216
BLAST of CX290598 vs. ExPASy Swiss-Prot
Match: PSB9_MUSSI (Proteasome subunit beta type-9 OS=Mus spicilegus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.562e-14 Identity = 58/175 (33.14%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 7 GDTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGV 528 G T +A F GV+V +DSR S G + ++ K+ ++ + ++G AAD Q + LH L + V A+ ++ NI Y YR L ++AGWD+ G Y + GG L F++ GSGS Y YG +D+ YK M+ I A RD +SGGV Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQVY-GTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGV 192
BLAST of CX290598 vs. ExPASy Swiss-Prot
Match: PSB9_MUSMB (Proteasome subunit beta type-9 OS=Mus musculus bactrianus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.562e-14 Identity = 58/175 (33.14%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 7 GDTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGV 528 G T +A F GV+V +DSR S G + ++ K+ ++ + ++G AAD Q + LH L + V A+ ++ NI Y YR L ++AGWD+ G Y + GG L F++ GSGS Y YG +D+ YK M+ I A RD +SGGV Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQVY-GTMGGMLIRQPFTISGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGV 192
BLAST of CX290598 vs. ExPASy Swiss-Prot
Match: PSB9_MOUSE (Proteasome subunit beta type-9 OS=Mus musculus GN=Psmb9 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.562e-14 Identity = 58/175 (33.14%), Postives = 85/175 (48.57%), Query Frame = 1 Query: 7 GDTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFSV-GSGSPYAYGVLDSGYKFDMSIXXXXXXXXXXIYHATFRDAASGGV 528 G T +A F GV+V +DSR S G + ++ K+ ++ + ++G AAD Q + LH L + V A+ ++ NI Y YR L ++AGWD+ G Y + GG L F++ GSGS Y YG +D+ YK M+ I A RD +SGGV Sbjct: 20 GTTIMAVEFDGGVVVGSDSRVSAGTAVVNRVFDKLSPLHQRIFCALSGSAADAQAIADMAAYQLELHGLELEEPPLVLAAANVVKNISYKYR-EDLLAHLIVAGWDQREGGQVY-GTMGGMLIRQPFTIGGSGSSYIYGYVDAAYKPGMTPEECRRFTTNAITLAMNRDGSSGGV 192 The following BLAST results are available for this feature:
BLAST of CX290598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290598 ID=CX290598; Name=CX290598; organism=Citrus clementina; type=EST; length=683bpback to top |