CX290628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYC_CANAL (Serine hydroxymethyltransferase, cytosolic OS=Candida albicans GN=SHM2 PE=1 SV=3) HSP 1 Score: 125.946 bits (315), Expect = 1.182e-28 Identity = 67/155 (43.23%), Postives = 101/155 (65.16%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKD-IEALKADVEKFASSFDM 483 P FK Y +QV NA AL + T KGY LV+ GT++H+VL L+ + G +VE +C+ NI +NKN++ GD SAL PGGVRIG PAMT+RGL E+DF++I ++ AV E+Q + K LKDF + + + ++A++ ++ ++A SF + Sbjct: 314 PEFKEYQEQVLKNAKALESEFTKKGYKLVSDGTDSHMVLVSLKDKQIDGARVETVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGLGEEDFKKIVSYIDFAVNYAKEVQSQLPKDANKLKDFKNAVSGDSEKLKAVRDEIYQWAGSFPL 468
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYC_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=shm2 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 4.491e-28 Identity = 72/160 (45.00%), Postives = 96/160 (60.00%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQ----KEYGKLLKDFNKGLVNN----KDIEALKADVEKFASSFDMP 486 P F Y K V +NA A+ N +GY LV+GGT+ HLVL DL G+ G +VE++ +L NI+ NKN V GD SAL P G+R+GTPA T+RG EKDFE++ E + V+LT +I KE +DF K V + +I LK +V +A FD P Sbjct: 313 PEFYQYQKDVLSNAKAMANAFITRGYKLVSGGTDTHLVLVDLTDKGVDGARVERILELVNISANKNTVPGDKSALIPRGLRLGTPACTTRGFDEKDFERVVELIDEVVSLTKKINEAALKEGKSKFRDF-KAYVGDGSKFSEIAKLKKEVITWAGKFDFP 471
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYM_CANGA (Serine hydroxymethyltransferase, mitochondrial OS=Candida glabrata GN=SHM1 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 5.866e-28 Identity = 61/160 (38.12%), Postives = 99/160 (61.88%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQ-------KEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 489 P F Y KQV +NA A G+ L +G+ LV+GGT+NHL+L +L +G+ G ++E + + NI NKN + GD SAL P G+R+GTPAMT+RG E+DF+++ E++ AV L++ ++ K+ L F + ++ ++ L +V + +F +PG Sbjct: 324 PEFVEYQKQVVSNAKAFGDELLKRGFELVSGGTDNHLLLLNLSNMGIDGARLEAILEKINIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFQEQDFKKVAEYIDNAVKLSIALKSQESADAKDVRSKLNSFKQLCDQSEPVQKLAEEVSSWVGTFPVPG 483
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYC_YEAST (Serine hydroxymethyltransferase, cytosolic OS=Saccharomyces cerevisiae GN=SHM2 PE=1 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 4.966e-27 Identity = 64/155 (41.29%), Postives = 95/155 (61.29%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKDI-EALKADVEKFASSFDM 483 P FK Y QV NA AL + GY LV+ GT++H+VL LR G+ G +VE +C+ NI +NKN++ GD SAL PGGVRIG PAMT+RG+ E+DF +I +++++AV ++Q+ K LKDF + D+ K ++ +A + + Sbjct: 313 PEFKEYQTQVLKNAKALESEFKNLGYRLVSNGTDSHMVLVSLREKGVDGARVEYICEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVQYINKAVEFAQQVQQSLPKDACRLKDFKAKVDEGSDVLNTWKKEIYDWAGEYPL 467
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYD_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=SPAC24C9.12c PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 7.171e-26 Identity = 62/157 (39.49%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNK---DIEALKADVEKFASSFDM 483 PA+K Y QV NA +GY L GT++H+VL D++ G+ G + E++ +L NI NKN V D SA +P G+R+GTPAMT+RG E+DF ++ +++ RA+T +QKE K LKDF L + ++ L+ +V ++ASSF + Sbjct: 307 PAYKEYQAQVVKNAKVCEEEFKKRGYKLAADGTDSHMVLVDVKSKGVDGARAERVLELINIVTNKNTVPSDKSAFSPSGIRVGTPAMTTRGFKEQDFVRVVDYIDRALTFAANLQKELPKDANKLKDFKAKLGEGEQYPELVQLQKEVAEWASSFPL 463
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYM_CANAL (Serine hydroxymethyltransferase, mitochondrial OS=Candida albicans GN=SHM1 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.223e-25 Identity = 61/158 (38.61%), Postives = 96/158 (60.76%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQ-KEYGK----LLKDFNKGLVNNKDIEALKADVEKFASSFDMPG 489 P + Y ++V +NA + L KG+ LV+ GT+ HL+L DLR + G +VE + + NI NKN V GD SAL P G+R+GTPAMT+RG ++F+++ EF+ +AV + +E++ +E GK LL F K + ++ L +V + S + +PG Sbjct: 334 PEYVKYQQEVVSNAKHFADALVSKGFKLVSDGTDTHLILVDLRSRNIDGARVEAVLERANIAANKNTVPGDVSALFPSGLRVGTPAMTTRGFGPEEFDKVAEFIDQAVNIAIELKAQEQGKVPKELLASFKKLADESDKVKQLDKEVVSWVSKYPVPG 491
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYC_CANGA (Serine hydroxymethyltransferase, cytosolic OS=Candida glabrata GN=SHM2 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.597e-25 Identity = 65/155 (41.94%), Postives = 92/155 (59.35%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKD-IEALKADVEKFASSFDM 483 P FK Y QV NA AL N GY LV+ GT++H+VL LR G+ G +VE +C+ NI +NKN++ GD SAL PGGVRIG PAMT+RG+ E+DF +I ++ +AV + Q K LKDF + D + LK ++ + + + + Sbjct: 313 PEFKEYQTQVLKNAKALENEFQTLGYRLVSNGTDSHMVLVSLREKGVDGARVEYVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFHRIVRYIDQAVKFAEQTQSSLPKEANKLKDFKAKVDEIADQLAPLKKEIYDWTAEYPL 467
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYM_KLULA (Serine hydroxymethyltransferase, mitochondrial OS=Kluyveromyces lactis GN=SHM1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 2.725e-25 Identity = 62/160 (38.75%), Postives = 91/160 (56.88%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKD-------IEALKADVEKFASSFDMPG 489 P FK Y V NA G L KG+ LV+GGT+ HL+L +L LG+ G ++E L + NI NKN + GD SAL P G+R+GTPAMT+RG ++F Q+ ++ RAV L + I+ + KD L + K+ ++ L +V ++ F +PG Sbjct: 337 PEFKEYQAAVVENARIFGEELVKKGFELVSGGTDTHLILINLSNLGIDGARLETLLENINIAANKNTIPGDKSALFPSGLRVGTPAMTTRGFGPQEFAQVAAYIDRAVKLAIGIKSQESPDAKDARSKLASFKELCKESDQVKQLADEVYQWVGEFPVPG 496
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYM_ASHGO (Serine hydroxymethyltransferase, mitochondrial OS=Ashbya gossypii GN=SHM1 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.035e-24 Identity = 58/147 (39.46%), Postives = 87/147 (59.18%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFAS 471 P FK Y V NA G L+ +G+SLV+GGT+ HL+L DL P+G+ G+++E + + NI NKN + GD SAL P G+R+GTPAMT+RG +F ++ +++ AV L + ++ + KD L + K A V K A+ Sbjct: 336 PEFKNYQTAVVENAKVFGEELSKRGFSLVSGGTDTHLLLIDLSPMGIDGSRLETILERLNIAANKNTIPGDKSALYPSGLRVGTPAMTTRGFGPAEFGRVAAYINEAVKLAIGLKSQEPVDAKDAKTRLAHFKSFCAESEQVTKLAN 482
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYC_ASHGO (Serine hydroxymethyltransferase, cytosolic OS=Ashbya gossypii GN=SHM2 PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.035e-24 Identity = 63/156 (40.38%), Postives = 91/156 (58.33%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGK---LLKDFNKGLVNNKD-IEALKADVEKFASSFDMP 486 P F+ Y + V NA L Y LV+ GT++H+VL LR G+ G +VE +C+ NI +NKN++ GD SAL PGGVRIG PAMT+RG+ E+DF +I +++RAV + IQ+ K LKDF + D I L ++ + + +P Sbjct: 313 PEFREYQELVLKNAKVLETEFKKLNYRLVSDGTDSHMVLVSLREKGVDGARVEHVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGMGEEDFARIVGYINRAVEIARSIQQSLPKEANRLKDFKAKVEGGTDEIAQLAQEIYSWTEEYPLP 468 The following BLAST results are available for this feature:
BLAST of CX290628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290628 ID=CX290628; Name=CX290628; organism=Citrus clementina; type=EST; length=542bpback to top |