CX290628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_PHYMT (Serine hydroxymethyltransferase OS=Phytoplasma mali (strain AT) GN=glyA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.151e-16 Identity = 43/110 (39.09%), Postives = 63/110 (57.27%), Query Frame = 1 Query: 37 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLG--LTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 357 F Y KQ+ NA L KGY +++ TENHL L D++ TG K+ + + NI VNKN + F + L G+R+GTPAMT+RG E +F ++ +F+ A+T Sbjct: 284 FIKYQKQILKNACFFAENLQKKGYRIISKSTENHLFLVDVKSKNPNFTGKKISDILNKVNIVVNKNVIPFDKETPLITSGIRLGTPAMTTRGFKENEFAKVSDFIDEAIT 393
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_NITEC (Serine hydroxymethyltransferase OS=Nitrosomonas eutropha (strain C91) GN=glyA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.151e-16 Identity = 46/105 (43.81%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 342 PAFK Y KQV NA + L +G +V+G T+ H+ L DLR LTG + E + +ITVNKNA+ D GVRIGTPA+T+RG E + EQ+ + Sbjct: 280 PAFKDYQKQVIENARVMARVLQQRGLRIVSGHTDCHMFLVDLRAKNLTGREAETALETAHITVNKNAIPNDPQKPFVTSGVRIGTPAITTRGFKELESEQLANLV 384
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_NEIGO (Serine hydroxymethyltransferase OS=Neisseria gonorrhoeae GN=glyA PE=3 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 5.151e-16 Identity = 44/97 (45.36%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 318 P FK YAKQVK NA + L +G +V+G TE+H+ L DL+P+ +TG E +ITVNKNA+ D G+RIG+ AMT+RG E D Sbjct: 280 PEFKQYAKQVKINAAVMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAALGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNETD 376
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_NEIG2 (Serine hydroxymethyltransferase OS=Neisseria gonorrhoeae (strain NCCP11945) GN=glyA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.151e-16 Identity = 44/97 (45.36%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 318 P FK YAKQVK NA + L +G +V+G TE+H+ L DL+P+ +TG E +ITVNKNA+ D G+RIG+ AMT+RG E D Sbjct: 280 PEFKQYAKQVKINAAVMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAALGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNETD 376
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_NEIG1 (Serine hydroxymethyltransferase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=glyA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.151e-16 Identity = 44/97 (45.36%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKD 318 P FK YAKQVK NA + L +G +V+G TE+H+ L DL+P+ +TG E +ITVNKNA+ D G+RIG+ AMT+RG E D Sbjct: 280 PEFKQYAKQVKINAAVMAEELVKRGLRIVSGRTESHVFLVDLQPMKITGKAAEAALGKAHITVNKNAIPNDPEKPFVTSGIRIGSAAMTTRGFNETD 376
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_DESAH (Serine hydroxymethyltransferase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=glyA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.151e-16 Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 354 P+F Y +QV ANA L + L +G LV+ GT+NHL+L +L G++G E ITVNKNAV D + G+RIGTP +T+RG+ E + + + E + +A+ Sbjct: 278 PSFAQYQRQVVANAATLADALMDRGMKLVSNGTDNHLMLLNLTHNGISGKDAENRLGAAGITVNKNAVPNDPRGPMITSGIRIGTPLVTTRGMGETEMDLVAELITQAL 386
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_AGRRK (Serine hydroxymethyltransferase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=glyA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.151e-16 Identity = 44/105 (41.90%), Postives = 58/105 (55.24%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 342 P F+ YA Q+ NA AL L G +V+GGT+NHL+L DLR TG + E +T NKN + F GVR+GTPA T+RG E +F +IG + Sbjct: 287 PEFQDYAAQIVKNAKALSETLISGGVDVVSGGTDNHLMLVDLRKKNATGKRAEAALGRAYVTCNKNGIPFDPEKPFVTSGVRLGTPAGTTRGFKEAEFREIGNLI 391
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA1_RALSO (Serine hydroxymethyltransferase 1 OS=Ralstonia solanacearum GN=glyA1 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.151e-16 Identity = 43/105 (40.95%), Postives = 64/105 (60.95%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 342 P FKAY +QV NA A+ L +G +V+G TE+H++L DLR +TG + EK+ +ITVNKNA+ D G+R+G+PAMT+RG E + ++ + Sbjct: 280 PTFKAYQEQVVKNARAMAETLMARGLRIVSGRTESHVMLVDLRAKSITGKEAEKVLGDAHITVNKNAIPNDPEKPFVTSGIRLGSPAMTTRGFKEGEAVKVAHLI 384
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA1_HAHCH (Serine hydroxymethyltransferase 1 OS=Hahella chejuensis (strain KCTC 2396) GN=glyA1 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 5.151e-16 Identity = 44/105 (41.90%), Postives = 63/105 (60.00%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 342 PAF+ Y +QV NA A+ + + +GY +V+GGT+NHL L DL G+TG + ITVNKN V D S G+RIGTP +T+RG EK+ ++ ++ Sbjct: 282 PAFRDYQQQVVNNARAMADAVKARGYKVVSGGTDNHLFLIDLIDKGVTGKDADAALGRAYITVNKNTVPNDPQSPFVTSGLRIGTPGVTTRGFKEKEVVELANWI 386
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_SPHWW (Serine hydroxymethyltransferase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=glyA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 6.727e-16 Identity = 44/105 (41.90%), Postives = 61/105 (58.10%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 342 P FKAYA V NA L L +G LV+GGT+ HL L DLRP+G+TG ++ + IT NKN V D + G+R+G+PA T+RG +F +I + + Sbjct: 295 PEFKAYAAAVVENAKVLAARLKERGADLVSGGTDTHLALVDLRPIGVTGRDADEALERAGITCNKNGVPNDPLPPVKTSGIRVGSPAGTTRGFGPAEFREIADMI 399 The following BLAST results are available for this feature:
BLAST of CX290628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290628 ID=CX290628; Name=CX290628; organism=Citrus clementina; type=EST; length=542bpback to top |