CX290628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_ALKOO (Serine hydroxymethyltransferase OS=Alkaliphilus oremlandii (strain OhILAs) GN=glyA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.118e-21 Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 342 P FKAY +QV NA LG L +G++LV+GGT+NHL+L DLR +TG EKL D +TVNKN + + S G+RIGTPA+T+RG+ E D I E + Sbjct: 278 PEFKAYQEQVIKNAAKLGEELKSRGFNLVSGGTDNHLLLLDLRNKNITGKDAEKLLDEVGVTVNKNTIPYDPESPFVTSGIRIGTPAVTTRGMKEDDMVTIAEII 382
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_RICAH (Serine hydroxymethyltransferase OS=Rickettsia akari (strain Hartford) GN=glyA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.072e-21 Identity = 55/135 (40.74%), Postives = 76/135 (56.30%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKD 432 P +K+Y KQ+ +NA AL + L +GY ++TGGT+NH+VL DLR G+TG D IT NKNA+ F ++S G+R+GTPA T+RG E+DF +G ++ D GL NNKD Sbjct: 281 PEYKSYIKQIISNAKALASSLQERGYDILTGGTDNHIVLVDLRKNGITGKLAANSLDNAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEQDFVSVGH------------------MVADILDGLKNNKD 397
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_CHLCH (Serine hydroxymethyltransferase OS=Chlorobium chlorochromatii (strain CaD3) GN=glyA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.072e-21 Identity = 52/110 (47.27%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 357 PAFK YA QV NA + + GY++V+GGT+NHL+L DLR +TG + E L ITVNKN V F D S G+RIGTPAMT+RG+ E + +I E + + +T Sbjct: 297 PAFKEYAAQVMKNASTMASRFMELGYTIVSGGTKNHLMLLDLRNKNVTGKEAENLLHEAGITVNKNMVPFDDKSPFVTSGIRIGTPAMTTRGMKEAESRRIAELIDQVIT 406
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_ANATD (Serine hydroxymethyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=glyA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.072e-21 Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 37 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 357 FK Y Q+ NA AL L +G+ LV+GGT+NHL+L DLR G+TG EK+ D NIT NKNAV F S + G+R+GTPA+T+RG E D ++ + +H A+T Sbjct: 281 FKNYQVQILKNAKALSTRLIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKILDEHNITCNKNAVPFDTQSPMITSGIRLGTPAVTTRGFKEGDMLEVADIIHDALT 388
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_SYNFM (Serine hydroxymethyltransferase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=glyA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21 Identity = 56/152 (36.84%), Postives = 82/152 (53.95%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDM 483 P+FK Y ++V A+A AL L GY LV+GGT+NHL+L DL P G+TG E+ D ITVNKN++ F G+RIGTPA+ +RG+L + + F+HR + K + + L+A+V +F S+F + Sbjct: 276 PSFKEYQQRVVADAAALAQELKALGYRLVSGGTDNHLMLVDLTPQGVTGRVAEETLDKAGITVNKNSIPFDQQKPQVTSGIRIGTPALATRGILPHHMKAVAGFMHRGL------------------KSAGDEPALARLRAEVAEFCSAFPL 409
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_BACSK (Serine hydroxymethyltransferase OS=Bacillus clausii (strain KSM-K16) GN=glyA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 5.318e-21 Identity = 55/109 (50.46%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 37 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTL 360 FK YAKQ+ ANA LG L +G +V+GGT+NHL+L DLR L LTG EK D IT NKNA+ F G+RIGT A+TSRG E + ++IGE + A+TL Sbjct: 282 FKTYAKQIIANAKRLGEKLQAEGVDIVSGGTDNHLLLLDLRSLQLTGKVAEKALDAVGITTNKNAIPFDPEKPFVTSGIRIGTAAVTSRGFGENEMDEIGELI--ALTL 388
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_MICAN (Serine hydroxymethyltransferase OS=Microcystis aeruginosa (strain NIES-843) GN=glyA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.945e-21 Identity = 51/105 (48.57%), Postives = 68/105 (64.76%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 342 P FK Y+ QV ANA AL L +G +VT GT+NHL+L DLR +G+TG + ++L NIT NKN V F S G+R+G+PAMT+RGL E +F +IG + Sbjct: 282 PEFKIYSGQVIANAQALAGQLKARGIKIVTDGTDNHLMLLDLRSVGMTGKEADRLVSTINITANKNTVPFDPESPFVTSGLRLGSPAMTTRGLGETEFIEIGNII 386
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_LYSSC (Serine hydroxymethyltransferase OS=Lysinibacillus sphaericus (strain C3-41) GN=glyA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.945e-21 Identity = 49/105 (46.67%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 342 P FK YAKQ+K NA AL L +G +V+GGT+NHL+L +++ LGLTG E D IT NKN + + S G+RIGTPA+TSRG E+D +++G + Sbjct: 278 PEFKDYAKQIKLNAKALAEVLIAEGVEIVSGGTDNHLLLLNVKSLGLTGKVAEHALDEVGITTNKNTIPYDTESPFVTSGIRIGTPAVTSRGFKEEDMKEVGAII 382
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_GLUOX (Serine hydroxymethyltransferase OS=Gluconobacter oxydans GN=glyA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.945e-21 Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 37 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLE 369 FKAY K+V ANA AL + L +G+ +VTGGT++HL+L DLRP +TG E + + IT NKNA+ F G+R+G+PA T+RG E +F ++G + +T LE Sbjct: 293 FKAYQKRVLANARALADELQNRGFDIVTGGTDSHLILVDLRPKKVTGKLAEAILERAGITANKNAIPFDPEKPFVTSGIRLGSPAATARGFGEAEFREVGRMIDEVLTAALE 404
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_GLOVI (Serine hydroxymethyltransferase OS=Gloeobacter violaceus GN=gylA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.945e-21 Identity = 53/110 (48.18%), Postives = 70/110 (63.64%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 357 P FK YA V ANA AL LT +G +LV+GGT+NHL+L DLR + LTG + + L NIT NKN + F S G+R+G+PAMT+RGL +F +IGE + +T Sbjct: 281 PEFKTYAADVVANARALAERLTARGLTLVSGGTDNHLMLVDLRSVDLTGKQADLLMSDVNITTNKNTIPFDPQSPFVTSGLRLGSPAMTTRGLGTTEFGEIGEIIANRLT 390 The following BLAST results are available for this feature:
BLAST of CX290628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290628 ID=CX290628; Name=CX290628; organism=Citrus clementina; type=EST; length=542bpback to top |