CX290628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_DEIRA (Serine hydroxymethyltransferase OS=Deinococcus radiodurans GN=glyA PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 6.945e-21 Identity = 50/109 (45.87%), Postives = 70/109 (64.22%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 354 P FK YA+Q+ NA AL KGY +V+GGT+NHL L DLRP GL G K +L D +IT++K+ + + L GG+RIGTPA+T+RG+ E Q+ + + RA+ Sbjct: 281 PEFKDYARQIIKNAQALAGEFQQKGYRVVSGGTDNHLFLLDLRPQGLNGTKATRLLDANHITISKSTLPYDTEKILHGGGIRIGTPAVTTRGMTEAHMTQVADLIDRAL 389
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_CLOPH (Serine hydroxymethyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=glyA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.945e-21 Identity = 54/122 (44.26%), Postives = 78/122 (63.93%), Query Frame = 1 Query: 34 AFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLL 396 +FK YA ++ +NA AL N LT +G++LV+GGT+NHL+L DL+ + +TG + E + D NIT NKN V D +S G+R+GTPA+T+RG EKD + E + V ++ KE K L Sbjct: 281 SFKDYAGKIISNAGALANELTARGFNLVSGGTDNHLMLIDLQNMNITGKEAEHILDEANITCNKNTVPNDPASPFVTSGIRLGTPAITTRGFNEKDMAVVAEAI-SLVVKDVDKNKEQAKAL 401
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_CALS8 (Serine hydroxymethyltransferase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=glyA PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.945e-21 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 37 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 357 F+ Y Q+ NA AL L +G+ LV+GGT+NHL+L DLR G+TG EK D NIT NKNA+ F S + G+R+GTPA+T+RG E+D ++ + +H A+T Sbjct: 283 FRNYQIQILKNAKALSERLIERGFRLVSGGTDNHLMLVDLRNKGITGKDAEKRLDSLNITCNKNAIPFDTQSPMVTSGIRLGTPAVTTRGFKEEDMIEVADIIHDALT 390
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_SILST (Serine hydroxymethyltransferase OS=Silicibacter sp. (strain TM1040) GN=glyA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.071e-21 Identity = 51/109 (46.79%), Postives = 69/109 (63.30%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 354 P FK+Y KQV+ANAVAL + L G +VTGGT+ H++L DLRP G+TGN V+K +IT NKN + F G+R+GTPA T+RG E++F +I + V Sbjct: 288 PEFKSYQKQVRANAVALADELIKGGLDIVTGGTDTHVMLVDLRPKGVTGNIVDKALGRAHITTNKNGIPFDPEKPTVTSGIRLGTPAGTTRGFGEEEFREIARLIVEVV 396
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_DESVV (Serine hydroxymethyltransferase OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=glyA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.071e-21 Identity = 57/132 (43.18%), Postives = 75/132 (56.82%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV------TLTLEIQKEYGKLLKDF 405 PAFK Y KQV NA AL LT G+ LV+GGT+NHL+L DL +TG E D ITVNKN V F S GVR+GTPA+T+RG+ + E++G ++ A+ T EI +E + + F Sbjct: 276 PAFKEYQKQVVDNAAALAGVLTAAGFDLVSGGTDNHLMLVDLTSKDVTGKDAEIALDKAGITVNKNTVPFETRSPFVTSGVRLGTPALTTRGMKAAEMEKVGGWIVDAIANTTNETRLAEISREVERFARQF 407
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_DESVH (Serine hydroxymethyltransferase OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=glyA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.071e-21 Identity = 57/132 (43.18%), Postives = 75/132 (56.82%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV------TLTLEIQKEYGKLLKDF 405 PAFK Y KQV NA AL LT G+ LV+GGT+NHL+L DL +TG E D ITVNKN V F S GVR+GTPA+T+RG+ + E++G ++ A+ T EI +E + + F Sbjct: 276 PAFKEYQKQVVDNAAALAGVLTAAGFDLVSGGTDNHLMLVDLTSKDVTGKDAEIALDKAGITVNKNTVPFETRSPFVTSGVRLGTPALTTRGMKAAEMEKVGGWIVDAIANTTNETRLAEISREVERFARQF 407
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_THET8 (Serine hydroxymethyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=glyA PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.185e-20 Identity = 51/109 (46.79%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 354 P FK Y++ V NA L L +GY +VTGGT+NHL L DLRP GLTG + E+ D ITVNKNA+ F G+RIGTPA+T+RG ++ + E + RA+ Sbjct: 277 PEFKEYSRLVVENAKRLAEELARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRAL 385
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_THET2 (Serine hydroxymethyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glyA PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 1.185e-20 Identity = 51/109 (46.79%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 354 P FK Y++ V NA L L +GY +VTGGT+NHL L DLRP GLTG + E+ D ITVNKNA+ F G+RIGTPA+T+RG ++ + E + RA+ Sbjct: 277 PEFKEYSRLVVENAKRLAEALARRGYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRAL 385
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_CARHZ (Serine hydroxymethyltransferase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=glyA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.185e-20 Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 342 P F+ Y +QV NA AL L +G LV+GGT+NHL+L D+RP+GLTG + E+L D +TVNKNA+ + S G+RIGTPA+T+RG+ E + +I E + Sbjct: 280 PEFREYQQQVVNNAKALAEELKKQGLRLVSGGTDNHLMLVDVRPVGLTGKRAEQLLDEIGVTVNKNAIPYDPESPNVTSGIRIGTPAVTTRGMKEGEMAEIAEII 384
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_SYNAS (Serine hydroxymethyltransferase OS=Syntrophus aciditrophicus (strain SB) GN=glyA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.021e-20 Identity = 52/130 (40.00%), Postives = 76/130 (58.46%), Query Frame = 1 Query: 37 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV------TLTLEIQKEYGKLLKDF 405 FK Y Q+ NA AL L G+GY LV+GGT+NHL+L DL GLTG + ++ D ITVNKN + F + G+RIGTPA+TSRG+ E++ I + + + +++E G+L ++F Sbjct: 278 FKDYQSQIVKNAQALAKELIGRGYRLVSGGTDNHLLLMDLTDKGLTGKEAQESLDSAGITVNKNGIPFDTRGPMVTSGIRIGTPALTSRGMKEEEMRTIARLIAEVLEHRDNEKHLMAVKEEVGRLCQNF 407 The following BLAST results are available for this feature:
BLAST of CX290628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290628 ID=CX290628; Name=CX290628; organism=Citrus clementina; type=EST; length=542bpback to top |