CX290628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_THELT (Serine hydroxymethyltransferase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=glyA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.447e-20 Identity = 49/112 (43.75%), Postives = 70/112 (62.50%), Query Frame = 1 Query: 37 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLE 369 F Y KQV ANA L N L+ G +V+GGT+ HL+L DL PL +TG EK + C +TVNKN + ++ S G+RIGTPA+T+RG+ EK+ ++I E + + L+ Sbjct: 280 FVEYQKQVIANAKTLANELSSMGLRIVSGGTDTHLMLVDLTPLNVTGKAAEKALEKCGVTVNKNTIPNETRSPFVASGIRIGTPAVTTRGMREKEMKKIAELIFEVLKNVLD 391
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_RICBR (Serine hydroxymethyltransferase OS=Rickettsia bellii (strain RML369-C) GN=glyA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.447e-20 Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 342 P +K+Y KQV NA AL L +GY ++TGGT+NH+VL DLR G+TG D IT NKNA+ F +S G+R+GTPA T+RG EKDF +G + Sbjct: 281 PEYKSYIKQVIINAKALAGSLQERGYDILTGGTDNHIVLVDLRKDGITGKIAANSLDRAGITCNKNAIPFDKTSPFITSGIRLGTPACTTRGFKEKDFVLVGHLI 385
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_RICB8 (Serine hydroxymethyltransferase OS=Rickettsia bellii (strain OSU 85-389) GN=glyA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.447e-20 Identity = 50/105 (47.62%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 342 P +K+Y KQV NA AL L +GY ++TGGT+NH+VL DLR G+TG D IT NKNA+ F +S G+R+GTPA T+RG EKDF +G + Sbjct: 281 PEYKSYIKQVIINAKALAGSLQERGYDILTGGTDNHIVLVDLRKDGITGKIAANSLDRAGITCNKNAIPFDKTSPFITSGIRLGTPACTTRGFKEKDFVLVGHLI 385
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_NATTJ (Serine hydroxymethyltransferase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=glyA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 3.447e-20 Identity = 54/122 (44.26%), Postives = 75/122 (61.48%), Query Frame = 1 Query: 37 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLK 399 FK Y KQV NA L + L GY LV GG++NHL+L DL+ G+TG K E++ D +ITVNKNAV D G+R+GTPA+T+RG E + +++ + L + +T LE Q+ K K Sbjct: 278 FKNYQKQVIKNASVLADELNNLGYDLVAGGSDNHLMLVDLQKKGVTGKKAERVLDDVHITVNKNAVPNDPEGPFVTSGLRLGTPAVTTRGFAEDEIKEVAQLLDKVIT-GLEDQENLEKCKK 398
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_RICFE (Serine hydroxymethyltransferase OS=Rickettsia felis GN=glyA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20 Identity = 55/135 (40.74%), Postives = 75/135 (55.56%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKD 432 P +K+Y KQV +NA AL + L +GY ++TGGT+NH+VL DL G+TG D IT NKNA+ F ++S G+R+GTPA T+RG EKDF +G ++ D GL NN+D Sbjct: 281 PEYKSYIKQVISNAKALASSLQERGYDILTGGTDNHIVLVDLCKDGITGKLAANSLDRAGITCNKNAIPFDETSPFITSGIRLGTPACTTRGFKEKDFVLVGH------------------MVADILDGLKNNED 397
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_PROVI (Serine hydroxymethyltransferase OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=glyA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20 Identity = 51/109 (46.79%), Postives = 66/109 (60.55%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 354 P F+ YA QV++NA A+ GY++V+GGT+NHL+L DLR +TG VE ITVNKN V F D S G+RIGT AMT+RG+ E D I E + R + Sbjct: 297 PEFRQYAMQVRSNAAAMSERFLSLGYNIVSGGTKNHLMLLDLRNKDITGKVVENTLHEAGITVNKNMVPFDDKSPFVTSGIRIGTAAMTTRGMNEDDSRLIAELIDRVI 405
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_PROA2 (Serine hydroxymethyltransferase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=glyA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20 Identity = 52/109 (47.71%), Postives = 65/109 (59.63%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 354 P FK YA QV+ANA A+ Y++V+GGT+NHL+L DLR +TG E L ITVNKN V F D S G+RIGTPAMT+RG+ E E I + R + Sbjct: 297 PEFKEYAVQVRANAAAMAQKFISLDYNIVSGGTKNHLMLIDLRNKNVTGKVAENLLHEAGITVNKNMVPFDDKSPFVTSGIRIGTPAMTTRGMTESHAEAIVSLIDRVI 405
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_MYXXD (Serine hydroxymethyltransferase OS=Myxococcus xanthus (strain DK 1622) GN=glyA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20 Identity = 50/109 (45.87%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAV 354 P FKAY +Q+ ANA AL L G L +GGT+NHL+L DLRP LTG E++ D ITVNKN + F + GVR+GTPA+T+RG+ E + +G + A+ Sbjct: 279 PEFKAYQRQIVANAKALAEALQRAGLRLTSGGTDNHLMLVDLRPKKLTGKVAEEVLDKAGITVNKNMIPFDPEKPMTTSGVRVGTPAITTRGMREAEMAVVGRLIGEAL 387
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_FERNB (Serine hydroxymethyltransferase OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=glyA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20 Identity = 54/138 (39.13%), Postives = 83/138 (60.14%), Query Frame = 1 Query: 37 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALK 447 FKAY Q+ NA AL L +G +V+GGT+ HL+L DL PL +TG E C+ITVNKN + ++ S G+R+GTPA+T+RG+ E+ E+I + + VT+ ++ E G + ++ K V+++ IE K Sbjct: 280 FKAYQNQIVKNAKALAKALENRGLRIVSGGTDTHLMLVDLNPLNVTGKAAETALGYCHITVNKNTIPNETRSPFVASGIRLGTPALTTRGMKEEQMEEIADLI---VTVLKNVKDEEGNVDEEVAK-RVSDRVIELCK 413
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_CHLPB (Serine hydroxymethyltransferase OS=Chlorobium phaeobacteroides (strain BS1) GN=glyA PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 4.502e-20 Identity = 52/110 (47.27%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 357 P FK YA QV+ NA + +G Y +V+GGT+NHL+L DLR +TG E L ITVNKN V F D S G+RIGTPAMT+RG+ E E I F+ R ++ Sbjct: 297 PEFKDYAVQVRNNAAVMAERFSGLDYQIVSGGTKNHLMLIDLRNKNVTGKVAENLLHDAGITVNKNMVPFDDKSPFVTSGIRIGTPAMTTRGMQESHAENIVGFIDRVIS 406 The following BLAST results are available for this feature:
BLAST of CX290628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290628 ID=CX290628; Name=CX290628; organism=Citrus clementina; type=EST; length=542bpback to top |