CX290628
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_PELLD (Serine hydroxymethyltransferase OS=Pelodictyon luteolum (strain DSM 273) GN=glyA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.880e-20 Identity = 51/110 (46.36%), Postives = 66/110 (60.00%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 357 P F+ YA QV+ NA ++ T GY++V+GGT+NHL+L DLR + G E L ITVNKN V F D S G+RIGT AMT+RG+ E D I E + R +T Sbjct: 297 PEFREYAVQVRKNAASMAERFTSLGYNIVSGGTKNHLMLLDLRNKDVNGKVAENLLHDAGITVNKNMVPFDDKSPFVTSGIRIGTAAMTTRGMKEADATLIAELIDRVIT 406
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_METPE (Serine hydroxymethyltransferase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=glyA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 5.880e-20 Identity = 59/152 (38.82%), Postives = 82/152 (53.95%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDS-SALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDM 483 P+FK Y++QV NA AL L G LV+GGT+NHL+L DL GLTG + E ITVNKN + ++ S G+RIGTPA+TSRG+ E + QIGE++ R + K + + I A+K +V AS + + Sbjct: 277 PSFKQYSRQVVKNAQALAETLGEAGLRLVSGGTDNHLILIDLSNRGLTGLEAEVALGKAGITVNKNTIPNENRSPFVTSGLRIGTPAVTSRGMKEDEMHQIGEYIIRVL------------------KDIQDEATISAVKNEVTALASRYSL 410
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_ROSS1 (Serine hydroxymethyltransferase OS=Roseiflexus sp. (strain RS-1) GN=glyA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.679e-20 Identity = 49/110 (44.55%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 357 P F+ YA+QV NA L N L +GY +++GGT+NHL+L DLR ++G ++ D IT NKNAV D S L G+R+GTPA+T+RG+ E + EQI + +T Sbjct: 296 PEFETYARQVIRNAQTLANALIARGYHVLSGGTDNHLMLIDLRNKAVSGKAAQEALDRAAITTNKNAVPNDDKSPLITSGIRLGTPALTTRGMKEPEMEQIAALIDDVIT 405
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_ROSCS (Serine hydroxymethyltransferase OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=glyA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.679e-20 Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVT 357 P F+ YA+Q+ NA L L +GY +++GGT+NHL+L DLR G++G ++ D IT NKNAV D S L G+R+GTPA+T+RG+ E + EQI + +T Sbjct: 296 PEFETYARQIIRNAQTLAGALMARGYHILSGGTDNHLMLIDLRNKGVSGKAAQEALDRAAITTNKNAVPNDDKSPLITSGIRLGTPALTTRGMKEPEMEQIAALIDDVIT 405
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_OCEIH (Serine hydroxymethyltransferase OS=Oceanobacillus iheyensis GN=glyA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 7.679e-20 Identity = 53/120 (44.17%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 37 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKL 393 FKAY+KQ+ ANA LG L +G +V+GGT+NHL+L D+ PL LTG EK D IT NKN + F S G+RIGT A+T+RG E++ ++I ++LTL+ ++ KL Sbjct: 278 FKAYSKQIVANAKLLGEALNKEGIRIVSGGTDNHLLLLDVTPLQLTGKVAEKALDDIGITTNKNTIPFDQESPFVTSGIRIGTAAVTTRGFGEEEMKEIASI----ISLTLKHHEDEAKL 393
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYC_ENCCU (Serine hydroxymethyltransferase, cytosolic OS=Encephalitozoon cuniculi GN=SHMT-1 PE=3 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.003e-19 Identity = 45/114 (39.47%), Postives = 73/114 (64.04%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEI 372 P F Y ++V N+ L + L G ++TGGT+NH++L DLR G+ G VE +CD I++N+NA+ G+SS L+P G+R+GT A+T+RG ++ ++G+ + V L E+ Sbjct: 303 PEFAEYTRRVVENSRELCSRLQSLGLDILTGGTDNHMLLVDLRSTGVDGAAVEHMCDALGISLNRNAIVGNSSPLSPSGIRVGTYAVTARGFGPEEMREVGDIIGGVVKLCREM 416
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_BRASO (Serine hydroxymethyltransferase OS=Bradyrhizobium sp. (strain ORS278) GN=glyA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.003e-19 Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 342 P FKAYAK V NA AL L +G+ +V+GGT+NHL+L DLRP GL GN EK IT NKN + F G+R+GTPA T+RG +F+Q+G + Sbjct: 292 PEFKAYAKNVVENAKALAESLRAQGFDIVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAAITCNKNGIPFDPEKPFVTSGLRLGTPAATTRGFGVAEFQQVGSLI 396
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_BORRA (Serine hydroxymethyltransferase OS=Borrelia recurrentis (strain A1) GN=glyA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.003e-19 Identity = 56/151 (37.09%), Postives = 79/151 (52.32%), Query Frame = 1 Query: 37 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMP 486 FK Y +V N A+ Y +G +V+GGT+NHL L DL LG+TG EK+ + NIT+NKNA+ F + G+RIG PA+TSRGL D ++ F+ RA+ + ++ +K +V F SSFDMP Sbjct: 286 FKDYISRVIENTKAMAEYFISEGLRIVSGGTDNHLFLVDLSGLGITGADAEKILESVNITLNKNAIPFDSKNPSVASGIRIGAPAITSRGLNRDDSIKVAHFIIRALKTK-------------------STDELRKIKQEVIGFISSFDMP 417
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_BORDL (Serine hydroxymethyltransferase OS=Borrelia duttonii (strain Ly) GN=glyA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.003e-19 Identity = 56/151 (37.09%), Postives = 79/151 (52.32%), Query Frame = 1 Query: 37 FKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAV-FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFLHRAVTLTLEIQKEYGKLLKDFNKGLVNNKDIEALKADVEKFASSFDMP 486 FK Y +V N A+ Y +G +V+GGT+NHL L DL LG+TG EK+ + NIT+NKNA+ F + G+RIG PA+TSRGL D ++ F+ RA+ + ++ +K +V F SSFDMP Sbjct: 286 FKDYISRVIENTKAMAEYFISEGLRIVSGGTDNHLFLVDLSGLGITGADAEKILESVNITLNKNAIPFDSKNPSVASGIRIGAPAITSRGLNRDDSIKVAHFIIRALKTK-------------------STDELRKIKQEVIGFISSFDMP 417
BLAST of CX290628 vs. ExPASy Swiss-Prot
Match: GLYA_CHLSY (Serine hydroxymethyltransferase OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=glyA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.310e-19 Identity = 49/105 (46.67%), Postives = 69/105 (65.71%), Query Frame = 1 Query: 31 PAFKAYAKQVKANAVALGNYLTGKGYSLVTGGTENHLVLWDLRPLGLTGNKVEKLCDLCNITVNKNAVFGD-SSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFL 342 P F+ YA Q++ NA AL L +G +LV+GGT+NHL+L DLR GLTG + ++ D ITVNKNA+ D + G+RIGTPA+T+RG+ E + QI ++ Sbjct: 277 PEFRQYAAQIRRNARALAEGLMAQGLTLVSGGTDNHLMLVDLRSTGLTGAQAQRALDKAAITVNKNAIPDDPQPPMKTSGIRIGTPAVTTRGMREPEMAQIAAWI 381 The following BLAST results are available for this feature:
BLAST of CX290628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290628 ID=CX290628; Name=CX290628; organism=Citrus clementina; type=EST; length=542bpback to top |