CX290640

Overview
NameCX290640
Unique NameCX290640
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length620
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 2.862e-38
Identity = 86/186 (46.24%), Postives = 120/186 (64.52%), Query Frame = 2
Query:   89 NRRLDEEQGDFPNWVSAKNRKLLQAPR----INANVIVAQDGTGNYRTVSEAISAASGNR---FVIYVKAGVYKEKIRTNK--DGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619
            +RRL  E   FP+WV  + RKLLQA      +  +++VAQDG+G Y+T++EA+      R   FV+++KAG+YKE ++ NK    +  IGDG   TII+G+ N + G +   TAT  I G+ FIA++IGF NTAG    QA+A+ V SD ++F+ C   GYQDTLY  + RQF+RD  I GTIDF+
Sbjct:  223 SRRLLAE--GFPSWVDQRGRKLLQAAAAYSDVKPDIVVAQDGSGQYKTINEALQFVPKKRNTTFVVHIKAGLYKEYVQVNKTMSHLVFIGDGPDKTIISGNKNYKDGITTYRTATVAIVGNYFIAKNIGFENTAGAIKHQAVAVRVQSDESIFFNCRFDGYQDTLYTHSHRQFFRDCTISGTIDFL 406          
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.738e-38
Identity = 87/184 (47.28%), Postives = 117/184 (63.59%), Query Frame = 2
Query:   89 NRRLDEEQGDFPNWVSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISAASGN-----RFVIYVKAGVYKEKIRTN--KDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619
            N+R+++   +F   +S    K L       +V+VAQDG+G+Y+T+ EA++ A        R+VI+VK GVY+E +      + I + GDG   TIITGD +  RG S   +ATF   GDGF+ RDI   NTAGP+  QA+AL   SD +VFYRCSI GYQDTLY  + RQF+R+ DIYGT+DFI
Sbjct:  137 NKRMEQNGKEFG--ISKITMKTLSIGE-KVDVVVAQDGSGDYKTIQEAVNGAGERLKGSPRYVIHVKQGVYEEYVNVGIKSNNIMITGDGIGKTIITGDKSKGRGFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFI 317          
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 4.882e-38
Identity = 87/179 (48.60%), Postives = 112/179 (62.57%), Query Frame = 2
Query:  104 EEQGDFPNWVSAKNRKLLQAP--RINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619
            +E   FP WVS  +R LLQ P      N++VAQ+GTGNY T+ EAISAA   S  RFVIY+K G Y E I     K  I  IGDG   T+I  + +   G +   +AT  + G GFIA+D+ F N AGP+  QA+AL  +SD + +YRCS   YQDT+Y  + +QFYR+ DIYGT+DFI
Sbjct:  180 KEDVGFPMWVSGSDRNLLQDPVDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFIAKDLSFVNYAGPEKHQAVALRSSSDLSAYYRCSFESYQDTIYVHSHKQFYRECDIYGTVDFI 358          
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 6.376e-38
Identity = 93/206 (45.15%), Postives = 124/206 (60.19%), Query Frame = 2
Query:   26 SNPLALVNRI-DRASYPKNSTYNRRLDEEQGDFPNWVSAKNRKLLQAPRINA--NVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRTNKD--GITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619
            SN LA+V +I    S  +   ++RRL      FP W+ A  R+LL+    ++  + +VA+DG+G ++T+ EA+      S  RF +YVK G Y E I  +K+   + + GDGK  T + G  N   GT    TATF + G GFIA+DIGF N AG    QA+AL   SD +VF+RCS  G+QDTLYA + RQFYRD DI GTIDFI
Sbjct:  223 SNSLAIVTKILGLLSRFETPIHHRRLL----GFPEWLGAAERRLLEEKNNDSTPDAVVAKDGSGQFKTIGEALKLVKKKSEERFSVYVKEGRYVENIDLDKNTWNVMIYGDGKDKTFVVGSRNFMDGTPTFETATFAVKGKGFIAKDIGFVNNAGASKHQAVALRSGSDRSVFFRCSFDGFQDTLYAHSNRQFYRDCDITGTIDFI 424          
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.088e-37
Identity = 88/212 (41.51%), Postives = 125/212 (58.96%), Query Frame = 2
Query:   26 SNPLALVNRIDR--ASYPKNSTY----NRRLDEEQGDFPNWVSAKNRKLLQAPRINA---NVIVAQDGTGNYRTVSEAISAASGN---RFVIYVKAGVYKEK--IRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619
            SN LA++  +D   +S PK  T      R   +E     +W+S K R++L+A  + A   N  VA+DG+GN+ T++ A+ A       R+ IY+K G+Y E   I   K  +T++GDG   TI+TG+ +  +      TATF   G+GF+A+ +GF NTAGP+G QA+A+ V SD +VF  C   GYQDTLYA   RQ+YR   I GT+DFI
Sbjct:  236 SNSLAMIKSLDGYLSSVPKVKTRLLLEARSSAKETDHITSWLSNKERRMLKAVDVKALKPNATVAKDGSGNFTTINAALKAMPAKYQGRYTIYIKHGIYDESVIIDKKKPNVTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGPEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIIGTVDFI 447          
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.088e-37
Identity = 82/176 (46.59%), Postives = 115/176 (65.34%), Query Frame = 2
Query:  113 GDFPNWVSAKNRKLLQA--PRINANVIVAQDGTGNYRTVSEAISAASGN---RFVIYVKAGVYKEKIRTN--KDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619
            G+FP WV+A +R+LLQ     I  +++VA+DG+G+Y T++EA++A   N   R ++ V+ G+Y+E +     K  + L+G+G   TIITG  N   G++   +AT    GDGFIA+DI F NTAGP+  QA+AL + +D TV  RC I  YQDTLY    RQFYRD +I GT+DFI
Sbjct:  208 GNFPTWVTAGDRRLLQTLGKDIEPDIVVAKDGSGDYETLNEAVAAIPDNSKKRVIVLVRTGIYEENVDFGYQKKNVMLVGEGMDYTIITGSRNVVDGSTTFDSATVAAVGDGFIAQDICFQNTAGPEKYQAVALRIGADETVINRCRIDAYQDTLYPHNYRQFYRDRNITGTVDFI 383          
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.855e-37
Identity = 91/206 (44.17%), Postives = 123/206 (59.71%), Query Frame = 2
Query:   26 SNPLALVNRIDRAS-YPKNSTYNRRLDEEQGDFPNWVSAKNRKLLQAP--RINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619
            SN L ++  I R    PK+S       E   ++P+W+S  +++LL+AP    N N+ VA DGTGN+ T+++A+ AA   S  RF+IY+K G Y E +     K  I  IGDG   T+I  + +   G S   T T  + G G+IA+DI F N+AGP   QA+A    SDH+ FYRC   GYQDTLY  + +QFYR+ DIYGTIDFI
Sbjct:  174 SNSLHMLQVISRKKPSPKSS-------EVDVEYPSWLSENDQRLLEAPVQETNYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWSTFQTPTVGVKGKGYIAKDISFVNSAGPAKAQAVAFRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFI 372          
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.423e-37
Identity = 92/226 (40.71%), Postives = 131/226 (57.96%), Query Frame = 2
Query:   26 SNPLALVNRI---DRASYP---KNSTYNRRLDEEQGD-----------------FPNWVSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619
            SN LA++  +   D A++    K ++ NR+L EE  +                 +P W+SA +R+LLQ   + A+  VA DG+G ++TV+ A++AA   S  R+VI++KAGVY+E +     K  I  +GDG+  TIITG  N   G++   +AT    G+ F+ARDI F NTAGP   QA+AL V SD + FY C +  YQDTLY  + RQF+    I GT+DFI
Sbjct:  207 SNALAMIKNMTDTDIANFEQKAKITSNNRKLKEENQETTVAVDIAGAGELDSEGWPTWLSAGDRRLLQGSGVKADATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRENVEVAKKKKNIMFMGDGRTRTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKCLIAGTVDFI 432          
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.202e-36
Identity = 84/206 (40.78%), Postives = 122/206 (59.22%), Query Frame = 2
Query:   26 SNPLALVNRIDRASYPKNSTYNRRLDEEQGDFPNWVSAKNRKLLQAPRINA---NVIVAQDGTGNYRTVSEAISAASGN---RFVIYVKAGVYKEKIRTNKD--GITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619
            SN LAL+        P      R L +     P+WVS  +R++L+A  + A   N  VA+DG+G++ T+++A+ A       R++IYVK G+Y E +  +K    +T++GDG   TI+TG+ +  +      TATF   G+GF+A+ +GF NTAG +G QA+A+ V SD ++F  C   GYQDTLYA   RQ+YR   I GTIDFI
Sbjct:  250 SNSLALIKTFTENLSPVMKVVERHLLD---GIPSWVSNDDRRMLRAVDVKALKPNATVAKDGSGDFTTINDALRAMPEKYEGRYIIYVKQGIYDEYVTVDKKKANLTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGSEGHQAVAIRVQSDRSIFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTIDFI 452          
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.499e-36
Identity = 79/159 (49.69%), Postives = 109/159 (68.55%), Query Frame = 2
Query:  158 QAPRINANVIVAQDGTGNYRTVSEAISAASGNR---FVIYVKAGVYKEKIRTNKD--GITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619
            QA +  A++IVA+DG+GN+ TV+EA++AA  N    FVIY+K G+YKE IR  K    +TL+GDG+  T+++GD N   G     +AT  +   GF+A+D+   NTAGP+  QA+AL +++D T+ YRC I  YQDTLYA + RQFYRD  I GT+DFI
Sbjct:   38 QALKDKADLIVAKDGSGNFTTVNEAVAAAPENGVKPFVIYIKEGLYKEVIRIGKKKTNLTLVGDGRDLTVLSGDLNGVDGIKTFDSATLAVDESGFMAQDLCIRNTAGPEKRQAVALRISTDMTIIYRCRIDAYQDTLYAYSGRQFYRDCYITGTVDFI 196          
The following BLAST results are available for this feature:
BLAST of CX290640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
PME21_ARATH2.862e-3846.24Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME38_ARATH3.738e-3847.28Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME40_ARATH4.882e-3848.60Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME3_PHAVU6.376e-3845.15Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME45_ARATH1.088e-3741.51Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME1_FICAW1.088e-3746.59Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME39_ARATH1.855e-3744.17Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME3_ARATH2.423e-3740.71Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME13_ARATH1.202e-3640.78Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME56_ARATH3.499e-3649.69Probable pectinesterase 56 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionC01010C01SK Veg1 Citrus clementina cDNA clone C01010C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290640 ID=CX290640; Name=CX290640; organism=Citrus clementina; type=EST; length=620bp
CNNNNNNNNNNNNNNNNNNNNNNNNAGTAATCCTTTAGCCCTTGTCAACA
GGATAGACAGGGCTAGTTACCCAAAGAACAGCACATATAATCGGCGTCTA
GATGAGGAACAAGGTGATTTTCCCAACTGGGTATCGGCGAAAAATAGGAA
ACTGCTGCAGGCCCCGCGCATAAATGCAAATGTGATTGTGGCTCAAGATG
GAACTGGCAATTATAGAACTGTTTCGGAAGCTATCAGTGCTGCTTCTGGA
AATCGTTTTGTGATTTATGTGAAGGCAGGTGTTTATAAGGAGAAAATTCG
AACTAACAAGGACGGTATTACTTTGATAGGAGATGGCAAATACACTACTA
TTATTACTGGTGATGATAATGCTCGTAGAGGCACTTCCATGCCTGGCACC
GCCACTTTCACAATCACAGGTGATGGATTTATCGCACGAGATATCGGATT
TCATAACACAGCAGGACCCCAAGGAGAGCAAGCATTAGCTCTAAACGTAG
CCTCAGATCATACGGTCTTTTACAGGTGCAGCATTGCAGGCTACCAAGAC
ACACTATACGCCCTCGCTCTGCGTCAGTTCTACAGAGACACCGACATCTA
CGGGACCATCGACTTCATAT
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