CX290640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.728e-33 Identity = 83/175 (47.43%), Postives = 109/175 (62.29%), Query Frame = 2 Query: 122 PNWVSAKNRKLL----QAPRINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKE--KIRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 P+W+ ++K L +A + A+V+VA+DGTG Y TV+ AI+AA S RFVIY+K G+Y E I K +TLIGDG+ TIIT + +A TAT G+GFI D+ F NTAGP A+AL V+ D +V YRC + GYQD LY + RQFYR+ I GT+DFI Sbjct: 192 PSWLFHVDKKDLYLNAEALKKIADVVVAKDGTGKYSTVNAAIAAAPQHSQKRFVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITSNLSASNVRRTFNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFI 366
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 1.797e-32 Identity = 79/170 (46.47%), Postives = 107/170 (62.94%), Query Frame = 2 Query: 146 RKLLQ----APRINANVIVAQDGTGNYRTVSEAISAA------SGNRFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 RKLLQ A +++ V V Q+GTGN+ T++ AI+AA S F+IYV AG+Y+E + NK + +IGDG T+ITG+ + G + +ATF ++G FI +I NTAGP QA+AL D +VFY CS YQDTLY +LRQFYR+ D+YGT+DFI Sbjct: 230 RKLLQSDADAVQVSDIVTVIQNGTGNFTTINAAIAAAPNKTDGSNGYFLIYVTAGLYEEYVEVPKNKRYVMMIGDGINQTVITGNRSVVDGWTTFNSATFILSGPNFIGVNITIRNTAGPTKGQAVALRSGGDLSVFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFI 399
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.347e-32 Identity = 79/176 (44.89%), Postives = 113/176 (64.20%), Query Frame = 2 Query: 119 FPNWVSAKNRKLLQAPRI---NANVIVAQDGTGNYRTVSEAISAASG----NRFVIYVKAGVYKEKIRTNKDG--ITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 FP+WVS R+LL + + + +++VAQD +G++R++ AI+ A+ +RFVIYVK GVY+E I D I L+GDG+ TIIT + + G + +AT G F+A+D+ F NTAGP QA+A+ +SD +VFYR I G+QDTLY + RQF+R+ I GTIDFI Sbjct: 257 FPSWVSRHERRLLVSASLAKSSPHLVVAQDRSGHFRSIQAAINFAARRRFKSRFVIYVKKGVYRENIDVGNDNHNIMLVGDGERKTIITSGRSVQHGYTTYNSATGGFGGQRFVAKDMTFINTAGPLRGQAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFI 432
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.065e-32 Identity = 79/197 (40.10%), Postives = 114/197 (57.87%), Query Frame = 2 Query: 92 RRL--DEEQGDFPNWVSAKNRKLLQ------------APRINANVIVAQDGTGNYRTVSEAISAASGN---RFVIYVKAGVYKEK--IRTNKDGITLIGDGKYTTIITGDDNAR--RGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 RRL D ++ P WVS +RKL+ R+ N +VA+DG+G ++TV +A+ A N R +IY+KAG+Y+E+ I K+ I + GDG T+I+ + + RGT+ +AT + +GF+A+ +GF NTAGP G QA A+ V D V + C GYQDTLY RQFYR+ + GT+DFI Sbjct: 233 RRLLEDIDETGIPTWVSGADRKLMAKAGRGRRGGRGGGARVRTNFVVAKDGSGQFKTVQQAVDACPENNRGRCIIYIKAGLYREQVIIPKKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQVESEGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFI 429
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 5.228e-32 Identity = 83/205 (40.49%), Postives = 116/205 (56.59%), Query Frame = 2 Query: 92 RRL--DEEQGDFPNWVSAKNRKLLQ-----AP---------------RINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARR--GTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 RRL D + P W S K+RKL+ AP +I A +VA+DG+G ++T+SEA+ A + R +I++KAG+Y E++R K+ I + GDG TIIT D + + GT+ + T + +GF+A+ IGF NTAGP G QA+AL V D V + C GYQDTLY RQFYR+ + GT+DFI Sbjct: 225 RRLLEDNDSKGLPKWFSGKDRKLMAKAGRGAPAGGDDGIGEGGGGGGKIKATHVVAKDGSGQFKTISEAVMACPDKNPGRCIIHIKAGIYNEQVRIPKKKNNIFMFGDGATQTIITFDRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPLGHQAVALRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFI 429
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.165e-31 Identity = 73/152 (48.03%), Postives = 97/152 (63.82%), Query Frame = 2 Query: 179 NVIVAQDGTGNYRTVSEAISAASGN---RFVIYVKAGVYKEKIRTNKDGITL--IGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 +V+VA+DG+GN+ TV A++AA + RFVIY+K G Y E + +K L IGDG T I G+ + G + ++T + G GFIAR I F N AGP QA+AL +D + FY+CS GYQDTLY +LRQFY + D+YGTIDFI Sbjct: 9 DVVVAKDGSGNFTTVGAAVAAAKDSSTARFVIYIKEGAYFEYVDVDKKKTNLMFIGDGIGKTWIKGNRSVVDGWTTFRSSTVAVVGTGFIARGISFENYAGPSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDVYGTIDFI 160
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.165e-31 Identity = 74/154 (48.05%), Postives = 99/154 (64.29%), Query Frame = 2 Query: 182 VIVAQDGTGNYRTVSEAISAASGNRF------VIYVKAGVYKEK--IRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 V V T N+ T++EA++AA + F VIY +AG+Y+E I K I LIGDG TII+G+ + G + ++TF + GD F+A D+ F NTAGP+ QA+A+ +D + FYRCS GYQDTLY +LRQFYR+ DIYGTIDFI Sbjct: 308 VTVGPYETDNFPTITEAVAAAPNHTFPEQGYFVIYARAGLYEEYVVISNKKRNIMLIGDGINKTIISGNHSFIDGWTTYNSSTFAVVGDRFVAVDVTFRNTAGPEKHQAVAVRNNADGSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFI 461
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.521e-31 Identity = 73/158 (46.20%), Postives = 101/158 (63.92%), Query Frame = 2 Query: 170 INANVIVAQDGTGNYRTVSEAISAASGNR------FVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 ++ VIV + N+ T+++AI+AA N FVIY + GVY+E I NK + L+GDG TIITG+ N G + ++F + G+ F+A D+ F NTAGP+ QA+AL ++ + FYRCS GYQDTLY +LRQFYR+ DIYGT+DFI Sbjct: 299 VSKAVIVGPFKSDNFTTITDAIAAAPNNTRPEDGYFVIYAREGVYEEYIVVPINKKNLMLMGDGINKTIITGNHNVVDGWTTYNCSSFAVVGERFMAVDVTFRNTAGPEKHQAVALRNNAEGSSFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFI 456
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 1.987e-31 Identity = 77/194 (39.69%), Postives = 115/194 (59.28%), Query Frame = 2 Query: 92 RRL--DEEQGDFPNWVSAKNRKLLQ---------APRINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEK--IRTNKDGITLIGDGKYTTIITGDDNARR--GTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 RRL D ++ P WVS +RKL+ RI A +VA+DG+G ++TV +A++A + R +I++KAG+Y+E+ I K+ I + GDG T+I+ + + + GT+ + T + +GF+A+ IGF NTAGP G QA+A+ V D V + C GYQDTLY RQFYR+ + GT+DFI Sbjct: 243 RRLLEDIDETGIPTWVSGADRKLMTKAGRGSNDGGARIRATFVVAKDGSGQFKTVQQAVNACPEKNPGRCIIHIKAGIYREQVIIPKKKNNIFMFGDGARKTVISYNRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFI 436
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.549e-31 Identity = 80/199 (40.20%), Postives = 111/199 (55.78%), Query Frame = 2 Query: 101 DEEQGDFPNWVSAKNRKLLQ------AP-------------RINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRTNK--DGITLIGDGKYTTIITGDDNA--RRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 D +Q P W S K+RKL+ AP +I +VA+DG+G ++T+SEA+ A + R +IY+KAGVYKE++ K + + + GDG TIIT D + GT+ + T + +GF+A+ IGF NTAGP G QA+A V D V + C GYQDTLY RQFYR+ + GT+DFI Sbjct: 227 DLDQKGLPKWHSDKDRKLMAQAGRPGAPADEGIGEGGGGGGKIKPTHVVAKDGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFI 425 The following BLAST results are available for this feature:
BLAST of CX290640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290640 ID=CX290640; Name=CX290640; organism=Citrus clementina; type=EST; length=620bpback to top |