CX290640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.549e-31 Identity = 80/199 (40.20%), Postives = 111/199 (55.78%), Query Frame = 2 Query: 101 DEEQGDFPNWVSAKNRKLLQ------AP-------------RINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRTNK--DGITLIGDGKYTTIITGDDNA--RRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 D +Q P W S K+RKL+ AP +I +VA+DG+G ++T+SEA+ A + R +IY+KAGVYKE++ K + + + GDG TIIT D + GT+ + T + +GF+A+ IGF NTAGP G QA+A V D V + C GYQDTLY RQFYR+ + GT+DFI Sbjct: 214 DLDQKGLPKWHSDKDRKLMAQAGRPGAPADEGIGEGGGGGGKIKPTHVVAKDGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFI 412
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.273e-27 Identity = 68/157 (43.31%), Postives = 92/157 (58.60%), Query Frame = 2 Query: 170 INANVIVAQDGTGNYRTVSEAISAASGN----RFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARR-GTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 + +V V +DG Y+TV +A++AA + +FVI + GVY+E + K + IGDG T+ITG NA G + TAT + GDGF+ARD+ F NTAGP QA+A SD ++ C G QDTLYA LRQFY++ I G +DFI Sbjct: 237 LKEDVTVCKDGKCGYKTVQDAVNAAPEDNGMRKFVIKISEGVYEENVIVPFEKKNVVFIGDGMGKTVITGSLNAGMPGITTYNTATVGVVGDGFMARDLTFQNTAGPDAHQAVAFRSDSDFSLIENCEFLGNQDTLYAHGLRQFYKNCRIQGNVDFI 393
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 6.190e-25 Identity = 70/175 (40.00%), Postives = 98/175 (56.00%), Query Frame = 2 Query: 122 PNWVSAKNRKLL----QAPRINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKE--KIRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 P+W+S ++K L + + +++VA+D TGNY V+ AI+AA S RFVIY+K +Y E I K +TLI DG+ +TIIT + ++ TATF GDGFI D+ F NT P + L V D ++ YRC + YQD LY RQ YR+ + T+DFI Sbjct: 54 PSWLSHVDKKDLYLNDETLKKITDILVAKDVTGNYNIVNVAIAAAPQHSQKRFVIYIKTSIYVEIVVIGNMKSNLTLIADGQDSTIITFNLSSSNSKRTFNTATFASNGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFI 228
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 6.844e-24 Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = 2 Query: 170 INANVIVAQDGTGN--YRTVSEAISAASGN----RFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARR-GTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 + +V V ++G + Y+TV EA+ +A +FVI ++ GVY+E +R K + IGDG T+ITG N + G + +AT + GDGF+ARD+ NTAG QA+A SD +V C G QDTLYA +LRQFY+ I G +DFI Sbjct: 285 LTEDVTVCKNGGKDCKYKTVQEAVDSAPDTNRTVKFVIRIREGVYEETVRVPFEKKNVVFIGDGMGKTVITGSLNVGQPGMTTFESATVGVLGDGFMARDLTIENTAGADAHQAVAFRSDSDFSVLENCEFLGNQDTLYAHSLRQFYKQCRIQGNVDFI 443
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.250e-17 Identity = 57/161 (35.40%), Postives = 87/161 (54.04%), Query Frame = 2 Query: 182 VIVAQDGTGNYRTVSEAI-SAASGN--RFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARR----------GTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 V V+QDG+G+Y +V +AI S GN R VI + G+Y++ + K+ IT G T++T ++ A + GT G + + G+ FIA +I F N+A QA+A+ V +D FY C G+QDTLY +Q+ +D I G++DFI Sbjct: 7 VRVSQDGSGDYCSVQDAIDSVPLGNTCRTVIRLSPGIYRQPVYVPKRKNFITFAGISPEITVLTWNNTASKIEHHQASRVIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFI 167
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.358e-16 Identity = 57/154 (37.01%), Postives = 79/154 (51.30%), Query Frame = 2 Query: 188 VAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEK--IRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTA-----GPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 V ++G N+ TV A+ A S R VI++ +G+Y EK I K ITL G G T I +D A AT + G F+A++I F N A G G QA+A+ +A D + F C G QDTL+ R +++D I G+IDFI Sbjct: 93 VDKNGCCNFTTVQSAVDAVGNFSQRRNVIWINSGMYYEKVVIPKTKPNITLQGQGFDITAIAWNDTAYSANGTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFI 246
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.252e-16 Identity = 66/208 (31.73%), Postives = 104/208 (50.00%), Query Frame = 2 Query: 80 STYNRRLDEEQGDFPNWV------------SAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRTN--KDGITLIGDGKYTTIITGDDNAR----RGTSMP--GTATFTITGDGFIARDIGFHNTA-----GPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 +T + R + +F WV +AKN KL + + + + G++ + +AI + + R VI V AGVYKEK+ K IT+ G+G T + D A+ +G M +A+F + F+A++I F NT G G+QA+AL V++D+ F+ C + G QDTLY R +Y+D I G++DFI Sbjct: 44 NTTSDRTQNPEDEFMKWVRFVGSLKHSVFKAAKN-KLFPSYTLTVH---KKSNKGDFTKIQDAIDSLPLINFVRVVIKVHAGVYKEKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFI 247
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.170e-15 Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 2 Query: 179 NVIVAQDGTGNYRTVSEAI-SAASGN--RFVIYVKAGVYKEKIRTN--KDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGP-----QGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 N V Q+G G+++T++EAI S +GN R +I + GVYKEK+ + K ITL G ++T D A + ++ +AT + D F+A +I N+A +G QAL++ ++ + FY C GYQDT+ F++D I GT DFI Sbjct: 42 NTNVKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFITLYGHPNAMPVLTFDGTAAQYGTVD-SATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFI 197
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.446e-15 Identity = 58/182 (31.87%), Postives = 88/182 (48.35%), Query Frame = 2 Query: 125 NWVSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISA---ASGNRFVIYVKAGVYKEKIRT--NKDGITLIGDGKYT--TIITGDDNAR------RGTSMPGTATFTITGDGFIARDIGFHNT----AGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 NWV+ A + ++V ++G G+ TV A+ ++ R I++ G+Y+EK+ +K I+ IG+ Y T+I+ D A + TA+ +I D F A I F NT AG QG QA+AL + D VFYR + G QDTL+ ++ I G +DFI Sbjct: 63 NWVTTNANANANATNVRRVIVVDKNGGGDSVTVQGAVDMVPDSNSQRVKIFILPGIYREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFI 244
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 7.584e-15 Identity = 52/160 (32.50%), Postives = 86/160 (53.75%), Query Frame = 2 Query: 173 NANVIVAQDGTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQG------EQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 N ++IV +G G+Y +V +AI A + N +++V+ G+YKE++ NK I + G+GK T+I ++++ +ATF + + F+A I N A P G Q++A VA+D FY C+ +TL+ R +Y + I G+IDFI Sbjct: 43 NRSIIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGKGKTVI---ESSQSSVDNVASATFKVEANHFVAFGISIRNDA-PVGMAFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFI 198 The following BLAST results are available for this feature:
BLAST of CX290640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290640 ID=CX290640; Name=CX290640; organism=Citrus clementina; type=EST; length=620bpback to top |