CX290640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.882e-14 Identity = 50/150 (33.33%), Postives = 73/150 (48.67%), Query Frame = 2 Query: 200 GTGNYRTVSEAISAA---SGNRFVIYVKAGVYKEKIRTNKDGITLI--GDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTA-----GPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 G GN+ V AI S ++ +I V +G Y+EK+ N++ L+ G G T I +D A+ + + +F + F A +I F N A G QA+AL + D FY C G QDTL R F+++ I G+IDFI Sbjct: 97 GCGNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAGNTADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFI 246
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.420e-14 Identity = 59/193 (30.57%), Postives = 94/193 (48.70%), Query Frame = 2 Query: 107 EQGDFPNWVSAKNRKLLQA-----PRINAN------VIVAQDGTGNYRTVSEAISA---ASGNRFVIYVKAGVYKEKIRTN--KDGITLIGD-GKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTA-----GPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 ++ P W A + Q P + A +IV Q+G G+++T++ AI + A+ NR +I + G+Y EK+ + + +TL+G G T + A+ GT +AT + F+A ++ NT+ G QG QALA+ + D FY C G+QDTL F+++ I GT DFI Sbjct: 31 DRAQIPQWFMANVKPFSQRRGTLDPELEAAEASRRVIIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPGIYHEKVTVDVGRPYVTLLGKPGAETNLTYAGTAAKYGTVE--SATLIVWATNFLAANLNIINTSPMPKPGTQG-QALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFI 220
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.385e-14 Identity = 55/160 (34.38%), Postives = 79/160 (49.38%), Query Frame = 2 Query: 182 VIVAQDGTGNYRTVSEAISAASGNR---FVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAG-PQGEQ--------ALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 VIV Q G GN+ T+ +AI + N F I VKAG+Y+EKI K I ++G GK +T + DD+A S+ + TF D + + I F N+ P + A+A + D + FY AG QDTL+ R ++ I G +DFI Sbjct: 29 VIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRSTRVEWDDHA----SLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDKSAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFI 184
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 8.385e-14 Identity = 61/195 (31.28%), Postives = 92/195 (47.18%), Query Frame = 2 Query: 98 LDEEQGDFPNWVSAK-----NRKLLQAPRINAN------VIVAQDGTGNYRTVSEAISA---ASGNRFVIYVKAGVYKEKIRTN--KDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTA-----GPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 + E + P W RK P + A + V Q G N++T++EAI + + NR +I + GVY EK+ + + ITL+G T++T A + ++ +AT + + F A + NTA G QG QALA+ + +D FY C G+QDTL F++D I GT DFI Sbjct: 28 IPENRAQIPQWFKTNVKPYSQRKGTLDPALEAAEAARQIITVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPGVYNEKVTIDIARPFITLLGQPGAETVLTYHGTAAQYGTVE-SATLIVWAEYFQAAHLTIKNTAPMPKPGSQG-QALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFI 220
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.868e-13 Identity = 54/160 (33.75%), Postives = 79/160 (49.38%), Query Frame = 2 Query: 182 VIVAQDGTGNYRTVSEAISAASGNR---FVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAG--PQGEQ-------ALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 V V Q G GN+ T+ +AI + N F I VKAG+Y+EKI+ K I L+G GK T + DD+ S+ + TF+ D + + I F N+ +G+ A+A + D + FY AG QDTL+ R ++ I G +DFI Sbjct: 34 VFVDQSGHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAGKRLTRVEWDDHY----SVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIGGDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFI 189
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.440e-13 Identity = 49/154 (31.82%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 188 VAQDGTGNYRTVSEAISAASGN---RFVIYVKAGVYKEK--IRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTA-----GPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 V+ +G G ++ V +AI A+ G+ + +I + G+Y+E+ + NK+ + + G G T I ++ + + + G+ F A +I F NTA G QA+AL V D FY C G QDTL R F++ I G+IDFI Sbjct: 44 VSLNGCGRFKRVQDAIDASIGSSQSKTLILIDFGIYRERFIVHENKNNLVVQGMGYSRTSIEWNNTTASSNGTFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFI 197
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13 Identity = 56/163 (34.36%), Postives = 85/163 (52.15%), Query Frame = 2 Query: 161 APRINANVIVAQDGTGNYRTVSEAI-SAASGN--RFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGP-----QGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 APRI I G ++T+++AI S +GN R +I + G YKEK+ NK ITL+G +IT D A + ++ +A+ I D F+A +I NTA +G QAL++ ++ + FY C G+QDT+ F++D + GT DFI Sbjct: 63 APRI----INVNPKGGEFKTLTDAIKSVPAGNTKRVIIKMAPGEYKEKVTIDRNKPFITLMGQPNAMPVITYDGTAAKYGTVD-SASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFI 220
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.099e-13 Identity = 61/190 (32.11%), Postives = 97/190 (51.05%), Query Frame = 2 Query: 80 STYNRRLDEEQGDFPNWVSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAI-SAASGN--RFVIYVKAGVYKEKIRT--NKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGP-----QGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 +T+ L + +G P V+A+ APRI I G ++T+++AI S +GN R +I + G Y+EK+ NK ITL+G +IT D A + ++ +A+ I D F+A +I NTA +G QAL++ ++ + FY C G+QDT+ F++D + GT DFI Sbjct: 41 NTHVGPLAQRKGLDPALVAAE-----AAPRI----INVNPKGGEFKTLTDAIKSVPAGNTKRVIIKMAHGEYREKVTIDRNKPFITLMGQPNAMPVITYDGTAAKYGTVD-SASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFI 220
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PMEA_ERWCH (Pectinesterase A OS=Erwinia chrysanthemi GN=pemA PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.581e-12 Identity = 54/189 (28.57%), Postives = 90/189 (47.62%), Query Frame = 2 Query: 131 VSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISAASGNR--FVIYVKAGVYKEKIRTNKDGITLIGDGKYTTIITG--------DDNARRGTSMPGTATFTITGDGFIARDIGFHN--------------TAGPQGEQALALNV--ASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 ++A + A NA V + ++T+++AI++A FVI +K GVY E++ ++ + L G+ + +I D ++ GT+ G++T TI+ F A+ + N ++ + QA+AL V + D F S+ GYQDTLY R F+ D I GT+DFI Sbjct: 15 IAASVHQAQAATTYNAVVSKSSSDGKTFKTIADAIASAPAGSTPFVILIKNGVYNERLTITRNNLLLKGESRNGAVIAAATAAGTLKSDGSKWGTA--GSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFI 201
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.581e-12 Identity = 52/151 (34.44%), Postives = 72/151 (47.68%), Query Frame = 2 Query: 188 VAQDGTGNYRTVSEAISAASGNR-----FVIYVKAGVYKEK--IRTNKDGITLIGDGKYTTIITGDDNARRGTSMPGTATFTITGDGFIARDIGFHNTAGPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 V Q G G++ + EAI + N + I+VK G+Y+EK I K ITL G T + D G + + T TI F+ R + N G G +A+AL VA+D FY C I YQDTL ++++ I G DFI Sbjct: 53 VDQSGKGDFSKIQEAIESIPPNLNNSQLYFIWVKPGIYREKVVIPAEKPYITLSGTQASNTFLIWSD----GEDILESPTLTIFASDFVCRFLTIQNKFGTAG-RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFI 198 The following BLAST results are available for this feature:
BLAST of CX290640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290640 ID=CX290640; Name=CX290640; organism=Citrus clementina; type=EST; length=620bpback to top |