CX290640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PMEA_DICD3 (Pectinesterase A OS=Dickeya dadantii (strain 3937) GN=pemA PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.065e-12 Identity = 54/189 (28.57%), Postives = 90/189 (47.62%), Query Frame = 2 Query: 131 VSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISAASGNR--FVIYVKAGVYKEKIRTNKDGITLIGDGKYTTIITG--------DDNARRGTSMPGTATFTITGDGFIARDIGFHN--------------TAGPQGEQALALNV--ASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 ++A + A NA V + ++T+++AI++A FVI +K GVY E++ ++ + L G+ + +I D ++ GT+ G++T TI+ F A+ + N ++ + QA+AL V + D F S+ GYQDTLY R F+ D I GT+DFI Sbjct: 15 IAASVHQAQAATTYNAVVSKSSSDGKTFKTIADAIASAPAGSTPFVILIKNGVYNERLTITRNNLHLKGESRNGAVIAAATAAGTLKSDGSKWGTA--GSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFI 201
BLAST of CX290640 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.697e-12 Identity = 60/197 (30.46%), Postives = 90/197 (45.69%), Query Frame = 2 Query: 77 NSTYNRRLDEEQGDFPNWVSAKNRKLLQAPRINANVIVAQDGTGNYRTVSEAISAASGNR---FVIYVKAGVYKEKI--RTNKDGITLIGDGKYTTIITGDDNAR----RGTSMPG--TATFTITGDGFIARDIGFHNTA-----GPQGEQALALNVASDHTVFYRCSIAGYQDTLYALALRQFYRDTDIYGTIDFI 619 NST ++++ WV K+ + V+ +G +R+V +A+ + N I + G Y+EK+ K IT G G+ T I D A G + TA+ T+ + F AR+I F NTA G QG QA+A ++ D F C G QDTL A R ++++ I G+IDFI Sbjct: 37 NSTDDQQIQHHH--HRKWVGPSGHKV---------ITVSLNGHAQFRSVQDAVDSIPKNNNKSITIKIAPGFYREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFI 222 The following BLAST results are available for this feature:
BLAST of CX290640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290640 ID=CX290640; Name=CX290640; organism=Citrus clementina; type=EST; length=620bpback to top |