CX290641
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290641 vs. ExPASy Swiss-Prot
Match: LOXE3_MOUSE (Epidermis-type lipoxygenase 3 OS=Mus musculus GN=Aloxe3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.175e-12 Identity = 50/185 (27.03%), Postives = 89/185 (48.11%), Query Frame = 2 Query: 26 WDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARN 580 W AI+++V++ V++YYP + V+ D ELQAW EI ++ + L TP +L++ +T I++ S HAA N GQ+ +G + PN P++ R + D K +L+ T P + + + ++S D+ LG + + E+ + F+ L ++ I RN Sbjct: 516 WAAIERFVSEIVSYYYPSDASVQQDCELQAWVGEIFAQAFLGRESSGFPSRLCTPGELVKYLTAIIFNCSAQHAAFNSGQHDFGAWMPNAPSSMR-QPPPQTKGDTTMKSYLD--------TLPEVNTTCRNLLLFWLVSQEPKDQRPLGTYPDEHFTEE-APRQSIAAFQNCLAQISKDIRERN 690
BLAST of CX290641 vs. ExPASy Swiss-Prot
Match: LX12B_MOUSE (Arachidonate 12-lipoxygenase, 12R type OS=Mus musculus GN=Alox12b PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.841e-12 Identity = 53/185 (28.65%), Postives = 86/185 (46.49%), Query Frame = 2 Query: 26 WDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARN 580 W A++++VT+ + +YYP+ + VE D ELQ W EI ++ + L+T +LIE +T +++ S HAAVN GQ Y + PN P++ R P + L+ ++T P V+ +L L D LG + + E+ + E FR L ++ I RN Sbjct: 506 WYAMERYVTEIITYYYPNDAAVEGDPELQCWVQEIFKECLLGRESSGFPTCLRTIPELIEYVTMVMYTCSARHAAVNSGQLEYTSWMPNFPSSMR-----NPPMQTKGLTTLQ----TYMDTLPDVKTTCIVLLVLWTLCREPDDRRPLGHFPDIHFVEEGP-RRSIEAFRQNLNQISHNIRQRN 680
BLAST of CX290641 vs. ExPASy Swiss-Prot
Match: LOX12_HUMAN (Arachidonate 12-lipoxygenase, 12S-type OS=Homo sapiens GN=ALOX12 PE=1 SV=4) HSP 1 Score: 70.4774 bits (171), Expect = 8.266e-12 Identity = 54/185 (29.19%), Postives = 82/185 (44.32%), Query Frame = 2 Query: 26 WDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARN 580 W+ I ++V V+ +Y +V+ D ELQAW EI VG + + ++ L +T V+ + HAA+N GQ + + PN P C + P+ ++ + ++ + P QA MAI LS PD LG E + P A +FR L +LE I ARN Sbjct: 468 WEIIARYVEGIVHLFYQRDDIVKGDPELQAWCREITEVGLCQAQDRGFPVSFQSQSQLCHFLTMCVFTCTAQHAAINQGQLDWYAWVPNAP----CTMRMPPPTTKE-----DVTMATVMGSLPDVRQACLQMAISWHLSRRQPDMVPLGHHKE-KYFSGPKPKAVLNQFRTDLEKLEKEITARN 642
BLAST of CX290641 vs. ExPASy Swiss-Prot
Match: LX15B_RAT (Arachidonate 15-lipoxygenase B OS=Rattus norvegicus GN=Alox15b PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11 Identity = 51/185 (27.57%), Postives = 86/185 (46.49%), Query Frame = 2 Query: 26 WDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARN 580 W AI+ +V++ V+ YYP + V D+ELQAW EI + G ++ +L T + L++ +T +++ S HAAV+ Q+ + PN P + + T PE + T P+ V+ L +LS D LG + + E+ V + F+ KL+++ I RN Sbjct: 482 WSAIRSFVSEIVDIYYPSDASVRDDQELQAWVGEIFSEGFLSQESSGMPSLLDTQEALVQYVTMVIFTCSAKHAAVSASQFDSCVWMPNLPPSMQLPPPTSKGQ--------ASPE-GFIATLPAVNATCDVIIALWLLSKEPGDRRPLGHYPDEHFTEE-VPRRSIAAFQRKLIQISSGIRKRN 656
BLAST of CX290641 vs. ExPASy Swiss-Prot
Match: LOX12_BOVIN (Arachidonate 12-lipoxygenase, 12S-type OS=Bos taurus GN=ALOX12 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.102e-11 Identity = 52/186 (27.96%), Postives = 83/186 (44.62%), Query Frame = 2 Query: 26 WDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARNA 583 W+ + ++V V+ +Y V D ELQAW +I +G + + L++ L +T ++ +G H++ + GQ + + PN P T R P LEK ++ T P+ QA+ M+I L P LG+ E + P A +KFR +L LE I+ RNA Sbjct: 469 WEILSRYVEGIVSLHYKTDESVRDDIELQAWCRDITEIGLLGAQDRGFPVTLQSKDQLCHFVTMCIFTCTGQHSSTHLGQLDWYSWVPNAPCTMRL------PPPTTKDVTLEK----VMATLPNFHQASLQMSITWQLGRRQPIMVALGQH-EEEYFSGPEPKAVLKKFREELAALEKDIEIRNA 643
BLAST of CX290641 vs. ExPASy Swiss-Prot
Match: LOX12_MOUSE (Arachidonate 12-lipoxygenase, 12S-type OS=Mus musculus GN=Alox12 PE=1 SV=4) HSP 1 Score: 67.781 bits (164), Expect = 5.358e-11 Identity = 52/185 (28.11%), Postives = 76/185 (41.08%), Query Frame = 2 Query: 26 WDAIKQWVTDYVNHYYPDKSLVESDEELQAWWTEIRTVGHGDKKHEPWWPVLKTPKDLIEIITTIVWVTSGHHAAVNFGQYIYGGYFPNRPTTARCNIATEDPSDEQWKFFLEKPENALLNTFPSQIQATKVMAILDVLSTHSPDEEYLGKEIEPAWREDPVINAAFEKFRGKLMELEGIIDARN 580 W+ ++V V+ +Y +V D ELQAW EI VG + + ++ L +T V+ + HAA+N GQ + G+ PN P T R T + ++ + P +A M I L PD LG E + DP A +F+ L LE I ARN Sbjct: 468 WEVTARYVKGMVHLFYQSDDIVRGDPELQAWCREITEVGLCHAQDRGFPVSFQSRAQLCHFLTMCVFTCTAQHAAINQGQLDWYGWVPNAPCTMRMPPPTSKD---------DVTMETVMGSLPDVQKACLQMTITWHLGRLQPDMVPLGHHTE-KYFSDPRTKAVLSQFQADLDNLEKEITARN 642 The following BLAST results are available for this feature:
BLAST of CX290641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 46
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290641 ID=CX290641; Name=CX290641; organism=Citrus clementina; type=EST; length=635bpback to top |