CX290651

Overview
NameCX290651
Unique NameCX290651
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length626
Libraries
Library NameType
Veg1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290651 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.118e-13
Identity = 42/112 (37.50%), Postives = 60/112 (53.57%), Query Frame = 1
Query:   16 DDDSSNLIKYAWELWSDDQALEIVDSSMADSCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFMLSNETFVPSPKQPTFSVRRTEIDTDNSSSGIKS--SVNEVTLTTLNAR 345
            D    NL+ Y W LWSD   L++VDSS  DS    E +RCI + LLCVQ+ T +RP+MS +V ML+  +   +  QP     R+  +    S    S  S++  ++T L  R
Sbjct:  548 DASFGNLVTYTWRLWSDGSPLDLVDSSFRDSYQRNEIIRCIHIALLCVQEDTENRPTMSAIVQMLTTSSIALAVPQPPGFFFRSNHEQAGPSMDKSSLCSIDAASITILAPR 659          
BLAST of CX290651 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.118e-13
Identity = 39/115 (33.91%), Postives = 63/115 (54.78%), Query Frame = 1
Query:   16 DDDSSNLIKYAWELWSDDQALEIVDSSMADSCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFMLSNETF-VPSPKQPTFSVRRTEIDTDNSSSGIKS----SVNEVTLTTLNAR 345
            D   SNL+ Y W LWS+    E+VD S  D+    E  RCI + LLCVQ+   DRP+MS +V ML+  +  +  P+ P F +R  +   + +   + +    S++E ++T++  R
Sbjct:  552 DGSISNLVTYTWRLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDANDRPTMSAIVQMLTTSSIALAVPRPPGFFLRSKQEQAERACPSMDTSDLFSIDEASITSVAPR 666          
BLAST of CX290651 vs. ExPASy Swiss-Prot
Match: CRK22_ARATH (Cysteine-rich receptor-like protein kinase 22 OS=Arabidopsis thaliana GN=CRK22 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.461e-13
Identity = 39/104 (37.50%), Postives = 66/104 (63.46%), Query Frame = 1
Query:    7 IFKDDDSS---NLIKYAWELWSDDQALEIVDSSMADSCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFMLSNETF-VPSPKQPTFSVRRTEIDTDNSSSGIKS 306
            ++++D+++   NL+ YAW LW +   L+++DSS+  +  + E  RCI + LLCVQ+   DRP +ST+V ML++ T  VP+P  P F   ++  + D  S G++S
Sbjct:  557 LYQNDETTTAGNLVTYAWRLWRNGSQLKLLDSSIGRNYQSNEVTRCIHIALLCVQENPEDRPKLSTIVSMLTSNTISVPAPGIPGF-FPQSRRELDPLSEGLES 659          
BLAST of CX290651 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.908e-13
Identity = 35/100 (35.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query:   10 FKDDDSSNLIKYAWELWSDDQALEIVDSSMADSCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFMLSNETF-VPSPKQPTFSVRRTEIDTDNSSSGIKS 306
            +++D   +L+ Y W+LW ++  LE+VD +M  +    E +RCI + LLCVQ+ +++RPSM  ++ M+++ T  +P PK+  F +R  +   D  S G  S
Sbjct:  552 YEEDGLGDLVTYVWKLWVENSPLELVDEAMRGNFQTNEVIRCIHIALLCVQEDSSERPSMDDILVMMNSFTVTLPIPKRSGFLLRTMKDSRDPRSGGSAS 651          
BLAST of CX290651 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.492e-13
Identity = 41/124 (33.06%), Postives = 70/124 (56.45%), Query Frame = 1
Query:    1 TRIFKDDDSS--NLIKYAWELWSDDQALEIVDSSMADSCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFMLSNETF-VPSPKQPTFSVRRTE------IDTDNSSSGIKSSVNEVTLTTLNAR 345
            + +++ D +S  NL+ Y W LWS+   LE+VD S  D+    E  RCI + LLCVQ+   DRP+MS +V ML+  +  +  P++P F  R ++      +D  + ++    SV++ ++T +  R
Sbjct:  553 SNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRPTMSAIVQMLTTSSIALAVPQRPGFFFRSSKHEQVGLVDRLSINTSALCSVDDASITNVTPR 676          
BLAST of CX290651 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.254e-13
Identity = 42/120 (35.00%), Postives = 69/120 (57.50%), Query Frame = 1
Query:   16 DDDSSNLIKYAWELWSDDQALEIVDSSMADSCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFMLSNETF-VPSPKQPTFSVR-RTE--------IDTDNSSSGIKSSVNEVTLTTLNAR 345
            D   SNL+ + W L ++   LE+VD ++ ++    E +RCI +GLLCVQ+   DRPSMST+  ML+N +  +P P+ P F  R R+E        +   ++S     SV++ ++T++  R
Sbjct:  571 DGSVSNLVTHVWRLRNNGSLLELVDPAIGENYDKDEVIRCIHIGLLCVQENPDDRPSMSTIFRMLTNVSITLPVPQPPGFFFRERSEPNPLAERLLPGPSTSMSFTCSVDDASITSVRPR 690          
BLAST of CX290651 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.237e-12
Identity = 39/109 (35.78%), Postives = 60/109 (55.05%), Query Frame = 1
Query:   28 SNLIKYAWELWSDDQALEIVDSSMADSCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFMLSNETF-VPSPKQPTFSVRRTEIDT--DNSSSGIKSSVNEVTLTTLNAR 345
            +NL+ Y W+LW +    E++D  +     + E +R I +GLLCVQ+   DRP+MST+  ML+N +  +P P  P F  R         ++S     SV+E T+T +N R
Sbjct:  551 NNLVTYVWKLWENKSLHELLDPFINQDFTSEEVIRYIHIGLLCVQENPADRPTMSTIHQMLTNSSITLPVPLPPGFFFRNGPGSNPGQSNSKSFACSVDEATITDVNPR 659          
BLAST of CX290651 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.615e-12
Identity = 32/80 (40.00%), Postives = 48/80 (60.00%), Query Frame = 1
Query:   16 DDDSSNLIKYAWELWSDDQALEIVDSSMADSCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFML-SNETFVPSPKQPTF 252
            D+   NL+ YAW  W +   LE+VDS +  +  + E  RCI + LLCVQ+    RP++ST++ ML SN   +P P+ P +
Sbjct:  529 DESGKNLVTYAWRHWRNGSPLELVDSELEKNYQSNEVFRCIHIALLCVQNDPEQRPNLSTIIMMLTSNSITLPVPQSPVY 608          
BLAST of CX290651 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.755e-12
Identity = 36/90 (40.00%), Postives = 51/90 (56.67%), Query Frame = 1
Query:   31 NLIKYAWELWSDDQALEIVDSSMADSCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFML-SNETFVPSPK-QPTFSVRRTEIDTDNSSS 294
            N + Y W LW     L +VD+++A++  + E +RCI + LLCVQ+  TDRP  S ++ ML SN   +P PK  P+F   R    T   SS
Sbjct:  568 NFVTYVWRLWKSGTPLNLVDATIAENYKSEEVIRCIHIALLCVQEEPTDRPDFSIIMSMLTSNSLILPVPKPPPSFIPGRPNQSTTRPSS 657          
BLAST of CX290651 vs. ExPASy Swiss-Prot
Match: CRK27_ARATH (Cysteine-rich receptor-like protein kinase 27 OS=Arabidopsis thaliana GN=CRK27 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 8.015e-12
Identity = 36/111 (32.43%), Postives = 66/111 (59.46%), Query Frame = 1
Query:   22 DSSNLIKYAWELWSDDQALEIVDSSMADSCPAPEALRCIQVGLLCVQDRTTDRPSMSTVVFMLSNET---FVPSPKQPTFSVRRTEIDTDNSSSGIKSSVNEVTLTTLNAR 345
            + ++L  +AW+ W +  ++E++D  +  +    E+++C+++ L CVQ+  T RP+M +VV MLS+++    +P P QP F  R         S+    S+N+V+LT L+AR
Sbjct:  541 EGTDLPTFAWQNWIEGTSMELIDPVLLQTHDKKESMQCLEIALSCVQENPTKRPTMDSVVSMLSSDSESRQLPKPSQPGFFRR---------SASFSISLNDVSLTDLSAR 642          
The following BLAST results are available for this feature:
BLAST of CX290651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CRK5_ARATH1.118e-1337.50Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
CRK20_ARATH1.118e-1333.91Putative cysteine-rich receptor-like protein kinas... [more]
CRK22_ARATH1.461e-1337.50Cysteine-rich receptor-like protein kinase 22 OS=A... [more]
CRK25_ARATH1.908e-1335.00Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
CRK4_ARATH2.492e-1333.06Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
CRK21_ARATH3.254e-1335.00Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
CRK18_ARATH1.237e-1235.78Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
CRK33_ARATH1.615e-1240.00Putative cysteine-rich receptor-like protein kinas... [more]
CRK13_ARATH2.755e-1240.00Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
CRK27_ARATH8.015e-1232.43Cysteine-rich receptor-like protein kinase 27 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionC01019B10SK Veg1 Citrus clementina cDNA clone C01019B10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290651 ID=CX290651; Name=CX290651; organism=Citrus clementina; type=EST; length=626bp
ACTAGAATTTTTAAAGATGATGATTCCTCAAATCTGATAAAATATGCATG
GGAACTCTGGAGCGACGACCAGGCCCTGGAGATAGTTGACTCATCTATGG
CTGATTCATGCCCTGCTCCTGAAGCTTTGCGATGCATTCAAGTAGGACTC
TTGTGTGTGCAAGACAGAACAACAGACCGGCCAAGCATGTCAACAGTTGT
CTTTATGTTAAGCAATGAAACATTTGTTCCTTCCCCAAAACAACCTACAT
TTTCAGTGCGGAGAACTGAAATTGACACAGACAACTCTAGTTCTGGGATA
AAGTCTTCTGTTAATGAGGTGACACTAACTACACTTAATGCTCGATGAGT
TTACATGGTGTTCTATTGTACTGCAACCATTTTCTAGAATCAAAGCTTGT
AATATGAAAATTGTATGCAGACAAACAATTCATTTATAAAATCATGATAA
TAAGACTTAGTAAAGTCAGAGGTTCAAGGATAGGAAAAAAAAAAAAAAAA
AANNNNNNNNNNNNNNNNNNNNNGGCACGAGGCTTTTGTGCATTCTGGTG
ACTGCCCCGGTGACTAATGCCATAACATGCGGGCAGGTGACAGCCTCCTT
GGCTCCATGCATCCCTTTCTTGAGAA
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