CX290658
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290658 vs. ExPASy Swiss-Prot
Match: EXPB5_ARATH (Expansin-B5 OS=Arabidopsis thaliana GN=EXPB5 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.146e-12 Identity = 51/164 (31.10%), Postives = 75/164 (45.73%), Query Frame = 3 Query: 123 SAILIQLCCLSVSIK---AFSPSGWTQAHATFYGGSDASGTMGGACGYGNLYST-GYGISTAALSTALFNDGASCGQCYRIMCDYKSDTRWCIKGTSVTITATNFCPPNFALPSDNGGWCNPPRQHFDM---AYPAWQKIG----IYRGGIVPVLYQRVPCKKP 581 S I++ ++S+K + + W A T+YG + GT GGACGYG+ + Y +A +LF DG CG CYR+ CD+ T+ IK + ++ CP C HFD+ A+ A K G + G + V Y+R CK P Sbjct: 10 SFIVVLTTFFAISLKPCYCHNKTHWNTAGITWYGDREGPGTTGGACGYGDAVAKHPYRCMVSAGGPSLFKDGKGCGACYRLKCDHPLCTKKPIK-----VMISDECP-----------GCTKESVHFDLSGKAFGALAKRGKGDQLRNLGELKVSYKRACCKHP 157
BLAST of CX290658 vs. ExPASy Swiss-Prot
Match: EXB12_ORYSJ (Expansin-B12 OS=Oryza sativa subsp. japonica GN=EXPB12 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.195e-11 Identity = 47/151 (31.13%), Postives = 72/151 (47.68%), Query Frame = 3 Query: 180 SGWTQAHATFYGGSDASGTMGGACGYG-NLYSTGYGISTAALSTALFNDGASCGQCYRIMCDYKSDTRWCIKGTSVTITATNFCPPNFALPSDNGGWCNPPRQHFDMAYPAW-------QKIGIYRGGIVPVLYQRVPCKKPG-GVRFTIN 605 SGW+ AT+YG + +G+ GGACGY + + AA S +++ G CG CYR++C + C G VT+ T+ P L G C HFDM+ A+ Q + G++ + Y RV C+ G G+ F ++ Sbjct: 37 SGWSNGIATWYGDPNGAGSEGGACGYQYAVDQPPFSSRIAAGSPYIYDSGKGCGSCYRVVC---AGNEAC-SGIPVTVVITDQGPGGPCLEELVDGQCMNEAAHFDMSGTAFGAMARPGQADQLRGAGLLQIQYTRVECEWTGVGLTFVVD 183
BLAST of CX290658 vs. ExPASy Swiss-Prot
Match: EXPB2_ARATH (Putative expansin-B2 OS=Arabidopsis thaliana GN=EXPB2 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 2.661e-11 Identity = 56/183 (30.60%), Postives = 82/183 (44.81%), Query Frame = 3 Query: 153 SVSIKAFSPSGWTQAHATFYGGSDASGTMGGACGYGN-LYSTGYGISTAALSTALFNDGASCGQCYRIMCDYKSDTRWCIKGTSVTITATNFCPPNFALPSDNGGWCNPPRQHFDMAYPAW-------QKIGIYRGGIVPVLYQRVPCKKPG-GVRFTI----NGRDYFELVLISNVAGAGSI 662 ++S S S W+ A +T+YG G+ GGACGYGN + + +A +LF G CG CY++ C KS C K VT+ T+ CP C HFD++ A+ Q + G + +LY++V C G V F + N + VL++ V G G I Sbjct: 36 NISAATTSDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPSLFKSGKGCGACYQVKCTSKSA---CSK-NPVTVVITDECP-----------GCVKESVHFDLSGTAFGAMAISGQDSQLRNVGELQILYKKVECNYIGKTVTFQVDKGSNANSF--AVLVAYVNGDGEI 201 The following BLAST results are available for this feature:
BLAST of CX290658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290658 ID=CX290658; Name=CX290658; organism=Citrus clementina; type=EST; length=671bpback to top |