CX290672

Overview
NameCX290672
Unique NameCX290672
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length635
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290672 vs. ExPASy Swiss-Prot
Match: PP395_ARATH (Pentatricopeptide repeat-containing protein At5g21222 OS=Arabidopsis thaliana GN=ATC401 PE=2 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 3.814e-12
Identity = 29/113 (25.66%), Postives = 56/113 (49.56%), Query Frame = 1
Query:  133 MITLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHSKINLKGSSSSPDALQCKEDVVD 471
            M+    +P+      ++   C+  +ME+A   F  + + G+ P+L  +  +I G+  IN +    +V + M++ G+ PDVVT++ L +A S +         D  +C+E   D
Sbjct:  522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG--------DMKRCEEIYTD 626          

HSP 2 Score: 39.6614 bits (91), Expect = 3.814e-12
Identity = 17/52 (32.69%), Postives = 33/52 (63.46%), Query Frame = 3
Query:  483 LNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISD-RGLEPDTVTY 635
            LN+M++ G+RP+V+ YT +I+  C+   ++  + V+ ++    GL P+  TY
Sbjct:  659 LNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTY 710          
BLAST of CX290672 vs. ExPASy Swiss-Prot
Match: PP426_ARATH (Pentatricopeptide repeat-containing protein At5g50280, chloroplastic OS=Arabidopsis thaliana GN=EMB1006 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 3.828e-12
Identity = 29/117 (24.79%), Postives = 58/117 (49.57%), Query Frame = 1
Query:   61 SCNKLLTNLLIL-RDNNNALKLFKTMITLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHSK 408
            +C  L+T L    R      ++F+ M     + S+ ++  L+ + C     E+A ++   +  KG+  + I Y  ++  Y K N + E   +F +M+ +G+ P   TY +L DA+++
Sbjct:  310 TCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYAR 426          

HSP 2 Score: 35.4242 bits (80), Expect = 3.828e-12
Identity = 18/54 (33.33%), Postives = 31/54 (57.41%), Query Frame = 3
Query:  477 SFLNEMKEMGIRPDVISYTVLIAKLCNTQNLED-GITVFNEISDRGLEPDTVTY 635
            + L EM+++G+ P+V SYT LI+    T+ + D     F  +   GL+P + +Y
Sbjct:  435 TLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSY 488          
BLAST of CX290672 vs. ExPASy Swiss-Prot
Match: PP339_ARATH (Pentatricopeptide repeat-containing protein At4g26800 OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2)

HSP 1 Score: 56.6102 bits (135), Expect = 3.863e-12
Identity = 29/90 (32.22%), Postives = 53/90 (58.89%), Query Frame = 1
Query:  178 LIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHSKINLKGSSSSPDAL 447
            LI  LC+   +  A  V   + D+G++P+++TY+ +I G CK   L +A    ++M  + I P+V+T++ L DA++K   +G  S  D++
Sbjct:  199 LIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAK---RGKLSKVDSV 285          

HSP 2 Score: 35.039 bits (79), Expect = 3.863e-12
Identity = 16/48 (33.33%), Postives = 28/48 (58.33%), Query Frame = 3
Query:  492 MKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTY 635
            M +M I P+V +Y+ LI  LC    +++ I + + +  +G  P+ VTY
Sbjct:  289 MIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 336          

HSP 3 Score: 48.521 bits (114), Expect = 1.850e-11
Identity = 31/120 (25.83%), Postives = 60/120 (50.00%), Query Frame = 1
Query:   67 NKLLTNLLILRDNNNALKLFKTMITLNA-EPSKSMY--DKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHSKINL 417
            NK+LT +  ++  +  + L+K +      E S  +Y  + L+   C+  +   A      ++  G+ P ++T + +++G+C  N +++A  V   M++ GI  DVV  T+L D   K  L
Sbjct:   89 NKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 208          

HSP 4 Score: 40.817 bits (94), Expect = 1.850e-11
Identity = 17/51 (33.33%), Postives = 30/51 (58.82%), Query Frame = 3
Query:  483 LNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTY 635
            L  MK+ GI P+V++Y+ LI  LC +  L D     +E+  + + P+ +T+
Sbjct:  216 LKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 266          
BLAST of CX290672 vs. ExPASy Swiss-Prot
Match: PP432_ARATH (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2)

HSP 1 Score: 48.9062 bits (115), Expect = 4.917e-12
Identity = 32/114 (28.07%), Postives = 57/114 (50.00%), Query Frame = 1
Query:   67 NKLLTNLLILRDNNNALKLFKTMITLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHSK 408
            N++    L+LRD      + K MI     P++  Y+ LI       ++  A  + + ++  GL+P+ +T+  +I G+      +EA  +F  M+ +G+TP  V+Y VL D   K
Sbjct:  277 NRIAKGYLLLRD------MRKRMI----HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK 380          

HSP 2 Score: 42.3578 bits (98), Expect = 4.917e-12
Identity = 20/52 (38.46%), Postives = 30/52 (57.69%), Query Frame = 3
Query:  480 FLNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTY 635
            F   MK  G+    I+YT +I  LC    L++ + + NE+S  G++PD VTY
Sbjct:  390 FYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTY 441          

HSP 3 Score: 60.077 bits (144), Expect = 1.076e-11
Identity = 28/110 (25.45%), Postives = 55/110 (50.00%), Query Frame = 1
Query:   61 SCNKLLTNLLILRDNNNALKLFKTMITLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVL 390
            +CN +L +++   ++ +     K M+     P  + ++ LI  LC     E++  +   +   G  P ++TY  ++H YCK    + A ++ + MK +G+  DV TY +L
Sbjct:  160 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNML 269          

HSP 4 Score: 30.0314 bits (66), Expect = 1.076e-11
Identity = 15/54 (27.78%), Postives = 27/54 (50.00%), Query Frame = 3
Query:  474 FSFLNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTY 635
            +  L +M++  I P+ ++Y  LI    N   +     + NE+   GL P+ VT+
Sbjct:  283 YLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTF 336          
BLAST of CX290672 vs. ExPASy Swiss-Prot
Match: PP327_ARATH (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN=EMB1025 PE=2 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 4.982e-12
Identity = 29/115 (25.22%), Postives = 58/115 (50.43%), Query Frame = 1
Query:   73 LLTNLLILRDNNNALKLFKTMITLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHSKINL 417
            L+  L+  R   +A++L  +M       ++ +Y  LI  L +  + E+A  ++  + +KG  P+++ Y++++ G C+     EA+++ N M   G  P+  TY+ L     K  L
Sbjct:  333 LINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGL 447          

HSP 2 Score: 35.8094 bits (81), Expect = 4.982e-12
Identity = 17/58 (29.31%), Postives = 30/58 (51.72%), Query Frame = 3
Query:  462 CGGCFSFLNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTY 635
            C        EM + G   +   Y+VLI  LC    +++ + V++++   G++PDTV Y
Sbjct:  448 CEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAY 505          
BLAST of CX290672 vs. ExPASy Swiss-Prot
Match: PP365_ARATH (Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana GN=PPR4 PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 6.406e-12
Identity = 30/123 (24.39%), Postives = 56/123 (45.53%), Query Frame = 1
Query:   40 GVLVKKSSCNKLLTNLLILRDNNNALKLFKTMITLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHSK 408
            GV   + +  K++     + D   A + F  +     +     Y+ L+ A C++  M+ A  V   +  + +  +   Y ++I G+ +   + EA D+   MK+ G+ PD+ TYT    A SK
Sbjct:  654 GVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776          

HSP 2 Score: 36.5798 bits (83), Expect = 6.406e-12
Identity = 14/51 (27.45%), Postives = 28/51 (54.90%), Query Frame = 3
Query:  483 LNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTY 635
            + EM+ +G++P++ +YT LI         E  ++ + E+   G++PD   Y
Sbjct:  787 IEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVY 837          
BLAST of CX290672 vs. ExPASy Swiss-Prot
Match: PPR40_ARATH (Pentatricopeptide repeat-containing protein At1g13040, mitochondrial OS=Arabidopsis thaliana GN=At1g13040 PE=2 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 6.512e-12
Identity = 33/126 (26.19%), Postives = 60/126 (47.62%), Query Frame = 1
Query:   40 GVLVKKSSCNKLLTNLLILRDNNNALKLFKTMI-TLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHSKIN 414
            GV     +C  L+  L   R  + A ++    I +   + S  +Y+ LI   C+A  +E+A+ +   +   G  P L+TY ++++ Y   N L+ A  V  +M + GI  D  +Y  L   H +++
Sbjct:  179 GVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVS 304          

HSP 2 Score: 37.7354 bits (86), Expect = 6.512e-12
Identity = 20/57 (35.09%), Postives = 31/57 (54.39%), Query Frame = 3
Query:  471 CFSFLNEMKEMGIRP--DVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTY 635
            C++F+  +KEM  R   DV+SY+ LI   C   N      +F E+  +G+  + VTY
Sbjct:  309 CYNFM--VKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTY 363          

HSP 3 Score: 46.595 bits (109), Expect = 5.251e-11
Identity = 18/51 (35.29%), Postives = 33/51 (64.71%), Query Frame = 3
Query:  483 LNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTY 635
            L++M E+G+ PD I YT ++  LC + N++    VFN++ +  + PD ++Y
Sbjct:  383 LDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433          

HSP 4 Score: 41.2022 bits (95), Expect = 5.251e-11
Identity = 30/118 (25.42%), Postives = 62/118 (52.54%), Query Frame = 1
Query:  103 NNNALK----LFKTMITLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPH----LITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHSKINLKGSSS 432
            +NN LK    +   M+    +     Y++L+   C+    ++    ++ +V K + P     +++Y+ +I  +C+ +  R+A  +F +M+Q+G+  +VVTYT L  A  +   +G+SS
Sbjct:  267 DNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC---YNFMV-KEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLR---EGNSS 377          
BLAST of CX290672 vs. ExPASy Swiss-Prot
Match: PP211_ARATH (Pentatricopeptide repeat-containing protein At3g04130, mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 6.515e-12
Identity = 31/115 (26.96%), Postives = 59/115 (51.30%), Query Frame = 1
Query:   46 LVKKSSCNKLLTNLLILRDNNNALKLFKTMITLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVL 390
            LV  ++  K++       +   A+ +F  +     E +    + L+  LC+ + +EQA++V  + +   +TP+  T+ + IHG+CK N + EA     +MK  G  P V++YT +
Sbjct:  152 LVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTI 265          

HSP 2 Score: 34.6538 bits (78), Expect = 6.515e-12
Identity = 15/54 (27.78%), Postives = 30/54 (55.56%), Query Frame = 3
Query:  474 FSFLNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTY 635
            +  L+EM+  G  P+ I+YT +++ L   +  E+ + V   +   G +PD++ Y
Sbjct:  279 YEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFY 332          
BLAST of CX290672 vs. ExPASy Swiss-Prot
Match: PP288_ARATH (Pentatricopeptide repeat-containing protein At3g60050 OS=Arabidopsis thaliana GN=At3g60050 PE=2 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 6.529e-12
Identity = 29/123 (23.58%), Postives = 60/123 (48.78%), Query Frame = 1
Query:  112 ALKLFKTMITLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHSKINLKGSSSSPDALQCKEDVVDASV 480
            A+  F    T N  P K  Y+ ++ +L   ++ +  + V+  +++ G +P ++TY +++    ++  +     +F++M + G +PD  TY +L     K N K  ++       KE  +D SV
Sbjct:  203 AVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGN-KPLAALTTLNHMKEVGIDPSV 324          

HSP 2 Score: 43.1282 bits (100), Expect = 6.529e-12
Identity = 21/55 (38.18%), Postives = 32/55 (58.18%), Query Frame = 3
Query:  471 CFSFLNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTY 635
            C  FL+EM + G RPDV+ YTV+I     +  L+    +F E++ +G  P+  TY
Sbjct:  343 CKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTY 397          
BLAST of CX290672 vs. ExPASy Swiss-Prot
Match: PP396_ARATH (Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana GN=At5g24830 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 8.422e-12
Identity = 35/137 (25.55%), Postives = 73/137 (53.28%), Query Frame = 1
Query:   67 NKLLTNLLILRDNNNALKLFKTMITLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHSKINLKGSSSSPDALQCKEDVVDAS 477
            + ++ +L +    + AL L K MI     P    ++ L+  LC+A  +E+A  +   + + G +P+ ++Y  +I G C +N + +A  +FN M + GI P+ VT  ++  A  +  + G+++     +  E+++D+S
Sbjct:  125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNK----KLLEEILDSS 257          

HSP 2 Score: 33.8834 bits (76), Expect = 8.422e-12
Identity = 15/49 (30.61%), Postives = 25/49 (51.02%), Query Frame = 3
Query:  489 EMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTY 635
            EM +  +  D + Y V+I  LC++ N+        ++  RG+ PD  TY
Sbjct:  290 EMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTY 338          

HSP 3 Score: 46.2098 bits (108), Expect = 5.230e-11
Identity = 24/101 (23.76%), Postives = 48/101 (47.52%), Query Frame = 1
Query:  133 MITLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDAHSKINLKGSSSS 435
            M+     P    Y+ LI ALC+  + ++A  +   + + G+ P  I+Y ++I G C    +  A +    M +  + P+V+ + V+ D + +     S+ S
Sbjct:  326 MVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALS 426          

HSP 4 Score: 41.5874 bits (96), Expect = 5.230e-11
Identity = 17/50 (34.00%), Postives = 28/50 (56.00%), Query Frame = 3
Query:  486 NEMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTY 635
            NEM+   I PD  +Y +L+   C   +L     +++E+  RG +PD +TY
Sbjct:  464 NEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITY 513          

HSP 5 Score: 54.299 bits (129), Expect = 6.788e-11
Identity = 30/104 (28.85%), Postives = 49/104 (47.12%), Query Frame = 1
Query:  112 ALKLFKTMITLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDA---HSKIN 414
            AL+++K M   N      +Y+ +I  LC +  M  A      +V +G+ P + TY  +I   CK     EA D+   M+  G+ PD ++Y V+      H  +N
Sbjct:  284 ALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVN 387          

HSP 6 Score: 52.373 bits (124), Expect = 6.788e-11
Identity = 34/122 (27.87%), Postives = 59/122 (48.36%), Query Frame = 1
Query:   34 NQGVLVKKSSCNKLLTNLLILRDNNNALKLFKTMITLNAEPSKSMYDKLIGALCQAEEMEQAQLVFDVLVDKGLTPHLITYTMMIHGYCKINCLREARDVFNDMKQRGITPDVVTYTVLFDA 399
            N GV   + S   ++  L I  D N A +   +M+  +  P   +++ +I    +  +   A  V ++++  G+ P++ T   +IHGY K   L +A  V N+M+   I PD  TY +L  A
Sbjct:  363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGA 484          

HSP 7 Score: 35.039 bits (79), Expect = 6.788e-11
Identity = 17/54 (31.48%), Postives = 28/54 (51.85%), Query Frame = 3
Query:  474 FSFLNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTY 635
            F   +EM   G +PD+I+YT L+  LC    L+   ++ + I   G+  D V +
Sbjct:  495 FQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPF 548          

HSP 8 Score: 33.113 bits (74), Expect = 6.788e-11
Identity = 19/53 (35.85%), Postives = 25/53 (47.17%), Query Frame = 3
Query:  477 SFLNEMKEMGIRPDVISYTVLIAKLCNTQNLEDGITVFNEISDRGLEPDTVTY 635
            S LN M   G++P+V +   LI        L D   V NE+    + PDT TY
Sbjct:  426 SVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTY 478          
The following BLAST results are available for this feature:
BLAST of CX290672 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 123
Match NameE-valueIdentityDescription
PP395_ARATH3.814e-1225.66Pentatricopeptide repeat-containing protein At5g21... [more]
PP426_ARATH3.828e-1224.79Pentatricopeptide repeat-containing protein At5g50... [more]
PP339_ARATH3.863e-1232.22Pentatricopeptide repeat-containing protein At4g26... [more]
PP432_ARATH4.917e-1228.07Pentatricopeptide repeat-containing protein At5g55... [more]
PP327_ARATH4.982e-1225.22Pentatricopeptide repeat-containing protein At4g20... [more]
PP365_ARATH6.406e-1224.39Pentatricopeptide repeat-containing protein At5g04... [more]
PPR40_ARATH6.512e-1226.19Pentatricopeptide repeat-containing protein At1g13... [more]
PP211_ARATH6.515e-1226.96Pentatricopeptide repeat-containing protein At3g04... [more]
PP288_ARATH6.529e-1223.58Pentatricopeptide repeat-containing protein At3g60... [more]
PP396_ARATH8.422e-1225.55Pentatricopeptide repeat-containing protein At5g24... [more]

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Properties
Property NameValue
Genbank descriptionC02009D08SK IF1 Citrus clementina cDNA clone C02009D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290672 ID=CX290672; Name=CX290672; organism=Citrus clementina; type=EST; length=635bp
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTAACCAAGGAGTCTTAGT
GAAAAAAAGCTCATGTAATAAACTACTTACTAATCTTCTTATCCTACGTG
ATAACAACAATGCTCTCAAGTTGTTTAAGACAATGATAACTCTGAATGCT
GAACCCAGCAAAAGTATGTATGATAAGCTCATAGGTGCATTATGTCAGGC
GGAAGAAATGGAACAGGCACAATTAGTGTTTGATGTTTTAGTTGACAAAG
GGTTAACTCCTCATCTCATTACCTACACAATGATGATACATGGTTATTGC
AAAATAAATTGTTTGCGTGAAGCTCGTGATGTTTTCAATGATATGAAGCA
GAGAGGGATCACTCCTGATGTTGTAACTTATACAGTTTTATTTGATGCTC
ATTCAAAAATAAATCTAAAAGGTTCTTCTTCCTCGCCAGATGCCTTGCAA
TGTAAAGAAGATGTGGTGGATGCTTCAGTTTTTTGAACGAGATGAAGGAA
ATGGGAATAAGACCTGATGTTATAAGTTACACTGTTTTGATTGCAAAGCT
GTGCAACACACAAAACCTTGAAGATGGTATTACAGTCTTCAATGAAATAA
GTGATAGAGGACTGGAACCTGATACTGTCACATAC
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