CX290696
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290696 vs. ExPASy Swiss-Prot
Match: GDIB_HUMAN (Rab GDP dissociation inhibitor beta OS=Homo sapiens GN=GDI2 PE=1 SV=2) HSP 1 Score: 291.582 bits (745), Expect = 2.834e-78 Identity = 136/229 (59.39%), Postives = 183/229 (79.91%), Query Frame = 1 Query: 28 SFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLSNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYL 714 SFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DE DP+T EG+D + T R++ K+ L + IDF GHALAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ + GKV+GV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND++S Q+I+PQ Q+ R+SD+Y+ Sbjct: 108 SFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTTMRDVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCYETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYV 334
BLAST of CX290696 vs. ExPASy Swiss-Prot
Match: GDIB_PIG (Rab GDP dissociation inhibitor beta OS=Sus scrofa GN=GDI2 PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 3.701e-78 Identity = 136/229 (59.39%), Postives = 183/229 (79.91%), Query Frame = 1 Query: 28 SFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLSNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYL 714 SFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DENDP+T EG+D + RE+ K+ L + IDF GHALAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ + GKV+GV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NT+D++S Q+I+PQ Q+ R+SD+Y+ Sbjct: 108 SFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGVDPKKTAMREVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVIGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTSDANSCQIIIPQNQVNRKSDIYV 334
BLAST of CX290696 vs. ExPASy Swiss-Prot
Match: GDIB_RAT (Rab GDP dissociation inhibitor beta OS=Rattus norvegicus GN=Gdi2 PE=1 SV=2) HSP 1 Score: 289.271 bits (739), Expect = 1.406e-77 Identity = 135/229 (58.95%), Postives = 183/229 (79.91%), Query Frame = 1 Query: 28 SFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLSNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYL 714 SFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DE DP+T EG+D + + R++ K+ L + IDF GH+LAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ + GKVVGV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND++S Q+I+PQ Q+ R+SD+Y+ Sbjct: 108 SFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVVGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYV 334
BLAST of CX290696 vs. ExPASy Swiss-Prot
Match: GDIB_MOUSE (Rab GDP dissociation inhibitor beta OS=Mus musculus GN=Gdi2 PE=1 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.406e-77 Identity = 135/229 (58.95%), Postives = 183/229 (79.91%), Query Frame = 1 Query: 28 SFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLSNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYL 714 SFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DE DP+T EG+D + + R++ K+ L + IDF GH+LAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ + GKVVGV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND++S Q+I+PQ Q+ R+SD+Y+ Sbjct: 108 SFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGVDPKKTSMRDVYKKFDLGQDVIDFTGHSLALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVVGVKSEGEIARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYV 334
BLAST of CX290696 vs. ExPASy Swiss-Prot
Match: GDIB_CANFA (Rab GDP dissociation inhibitor beta OS=Canis familiaris GN=GDI2 PE=2 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 2.399e-77 Identity = 135/229 (58.95%), Postives = 181/229 (79.04%), Query Frame = 1 Query: 28 SFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLSNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYL 714 SFVY GK++KVP+T+ EAL S LMG+FEKRR RKF +YV ++DE DP+T EG+D + E+ K+ L + IDF GHALAL+R D YL++P +T+ R+KLY+ES+AR+ G SPY+YPLYGLGELPQ FARLSA+YGGTYMLNKP ++ + GKV+GV SEGE A+CK+++CDPSY+ ++V KVG+V R I I+SHPI NTND++S Q+I+PQ Q+ R+SD+Y+ Sbjct: 108 SFVYKGGKIYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGIDPKKTAIGEVYKKFDLGQDVIDFTGHALALYRTDDYLDQPCCETINRIKLYSESLARY-GKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPIEEI-IVQNGKVIGVKSEGEVARCKQLICDPSYVKDRVEKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYV 334
BLAST of CX290696 vs. ExPASy Swiss-Prot
Match: GDI1_SCHPO (Probable secretory pathway GDP dissociation inhibitor 1 OS=Schizosaccharomyces pombe GN=gdi1 PE=2 SV=1) HSP 1 Score: 266.929 bits (681), Expect = 7.474e-71 Identity = 126/229 (55.02%), Postives = 173/229 (75.55%), Query Frame = 1 Query: 28 SFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSYLSNKVRKVGRVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYL 714 S+VY G++ KVP +MEALKSPLM +FEKRRA+KF +V +Y E+DP T++ +++ R + + K+GL T DFIGHA+AL+ DD YL +PA +T +R+ LYA SIA+F G SPYIYPLYGLGELPQ FARLSA+YGGTYMLN+P ++ + ++G +GV S + AK K+++ DPSY KVR VGR+ RAI I++HPIPNT++ SVQ+I+PQ Q+ R+ D+Y+ Sbjct: 107 SYVYRDGRIAKVPGNEMEALKSPLMSLFEKRRAKKFLEWVNNYREDDPSTYKDINIDRDSMESVFKKFGLQSGTQDFIGHAMALYLDDAYLKKPARETRERILLYASSIAKF-GKSPYIYPLYGLGELPQGFARLSAIYGGTYMLNQPVDEIVYGDDGVAIGVRSGDQVAKAKQIIGDPSYFREKVRSVGRLVRAICILNHPIPNTDNLDSVQIIIPQNQVKRKHDIYI 334
BLAST of CX290696 vs. ExPASy Swiss-Prot
Match: GDI1_YEAST (Rab GDP-dissociation inhibitor OS=Saccharomyces cerevisiae GN=GDI1 PE=1 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.045e-64 Identity = 119/231 (51.52%), Postives = 173/231 (74.89%), Query Frame = 1 Query: 28 SFVYNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEE-GKVVGVTSEGETAKCKKVVCDPSYLSNKVRKVG-RVARAIAIMSHPIPNTNDSHSVQVILPQKQLGRRSDMYL 714 S+V+ +GK++KVPA ++EA+ SPLMGIFEKRR +KF ++ Y E+D TH+G+DL + T E+ K+GL ++T +FIGHA+AL +D YL +PA + +R+ LY +S+AR+ G SPY+YP+YGLGELPQ FARLSA+YGGTYML+ P +V + ++ GK GV ++ T K V+ DP+Y K + G RV RAI I++HP+PNT+++ S+Q+I+PQ QLGR+SD+Y+ Sbjct: 116 SYVFKQGKIYKVPANEIEAISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKEFIGHAMALWTNDDYLQQPARPSFERILLYCQSVARY-GKSPYLYPMYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKTKLGTFKAPLVIADPTYFPEKCKSTGQRVIRAICILNHPVPNTSNADSLQIIIPQSQLGRKSDIYV 345
BLAST of CX290696 vs. ExPASy Swiss-Prot
Match: RAE2_MOUSE (Rab proteins geranylgeranyltransferase component A 2 OS=Mus musculus GN=Chml PE=2 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.132e-18 Identity = 59/216 (27.31%), Postives = 108/216 (50.00%), Query Frame = 1 Query: 43 KGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NKPECKVEFDEEGKVVGVTSE-GETAKCKKVVCDPSYLSNKV---RKVGRVARAIAIMSHPIPNTNDSHSVQVIL 675 +GKV +VP + + S + + EKR KF + DY+++ + E D + + + + L N FI H++A+ + LD ++ K + + + RF G +P+I+PLYG GE+PQ F R+ AV+GG Y L +K +C V + G+ G+ G+ + + SYL + + +++RA+ I I T+ + +++ Sbjct: 269 EGKVEQVPCSRADVFNSKELSMVEKRMLMKFLTFCLDYEQH---SDEYQDFKQCSFSDYLKTKKLTPNLQHFILHSIAMTSESSCTT---LDGLQATKNFLQCLGRF-GNTPFIFPLYGHGEIPQCFCRMCAVFGGVYCLRHKVQCLVVDKDSGRCKGIIDAFGQRISANYFIVEDSYLPKETCSNVQYKQISRAVLITDQSILKTDSDQQISILV 477
BLAST of CX290696 vs. ExPASy Swiss-Prot
Match: RAE2_HUMAN (Rab proteins geranylgeranyltransferase component A 2 OS=Homo sapiens GN=CHML PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.789e-17 Identity = 61/225 (27.11%), Postives = 111/225 (49.33%), Query Frame = 1 Query: 37 YNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NKPECKVEFDEEGKVVGVTSE-GETAKCKKVVCDPSYLSNKV---RKVGRVARAIAIMSHPIPNTN-DSHSVQVILPQKQLG 693 + +GKV +VP + + S + + EKR KF + +Y+++ E + + E + L N F+ H++A+ + +D + K + + + RF G +P+++PLYG GE+PQ F R+ AV+GG Y L +K +C V E G+ + G+ K + + SYLS + + +++RA+ I I T+ D + +I+P + G Sbjct: 268 FREGKVEQVPCSRADVFNSKELTMVEKRMLMKFLTFCLEYEQHPD---EYQAFRQCSFSEYLKTKKLTPNLQHFVLHSIAMTSESSCTT---IDGLNATKNFLQCLGRF-GNTPFLFPLYGQGEIPQGFCRMCAVFGGIYCLRHKVQCFVVDKESGRCKAIIDHFGQRINAKYFIVEDSYLSEETCSNVQYKQISRAVLITDQSILKTDLDQQTSILIVPPAEPG 485
BLAST of CX290696 vs. ExPASy Swiss-Prot
Match: RAE1_RAT (Rab proteins geranylgeranyltransferase component A 1 OS=Rattus norvegicus GN=Chm PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17 Identity = 64/227 (28.19%), Postives = 114/227 (50.22%), Query Frame = 1 Query: 37 YNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDEN--DPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NKPECKVEFDEEGKVVGVTSE-GETAKCKKVVCDPSYLS-NKVRKV--GRVARAIAIMSHPIPNTNDSHSVQVI-LPQKQLG 693 + +G V +VP + + S + + EKR KF + +Y+E+ + + +EG T E + L N F+ H++A+ + +D +K K + + + R+ G +P+++PLYG GELPQ F R+ AV+GG Y L + +C V E K V + G+ K + + SYLS N +V +++RA+ I + T+ V ++ +P ++ G Sbjct: 263 FREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEG-----TTFSEYLKTQKLTPNLQYFVLHSIAMTSET---TSCTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSENTCSRVQYRQISRAVLITDGSVLKTDADQQVSILAVPAEEPG 480 The following BLAST results are available for this feature:
BLAST of CX290696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290696 ID=CX290696; Name=CX290696; organism=Citrus clementina; type=EST; length=714bpback to top |