CX290696
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290696 vs. ExPASy Swiss-Prot
Match: RABEP_DROME (Rab proteins geranylgeranyltransferase component A OS=Drosophila melanogaster GN=Rep PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.214e-17 Identity = 56/203 (27.59%), Postives = 95/203 (46.80%), Query Frame = 1 Query: 40 NKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYMLNKPECKVEFDEEGKVVGVTSEGETAKCKKVVCDPSY--LSNKVRKVGRVARAIAIMSHPIPN 642 + G++ VP + + + + I EKR KF DY E D + ++ T E + + + + A+A+ E ++R + + S+ R+ G +P+++P+YG GELPQ F RL AVYGG Y L + + D ++S G+T + K VV P Y +S + ++R + I S P+ N Sbjct: 142 HNGEIVSVPCSRSDVFNTKTLTIVEKRLLMKFLTACNDYGE-DKCNEDSLEFRGRTFLEYLQAQRVTEKISSCVMQAIAMCGPSTSFEEG----MQRTQRFLGSLGRY-GNTPFLFPMYGCGELPQCFCRLCAVYGGIYCLKRAVDDIALDSNSNEFLLSSAGKTLRAKNVVSAPGYTPVSKGIELKPHISRGLFISSSPLGN 338
BLAST of CX290696 vs. ExPASy Swiss-Prot
Match: RAE1_MOUSE (Rab proteins geranylgeranyltransferase component A 1 OS=Mus musculus GN=Chm PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.384e-16 Identity = 60/225 (26.67%), Postives = 111/225 (49.33%), Query Frame = 1 Query: 37 YNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NKPECKVEFDEEGKVVGVTSE-GETAKCKKVVCDPSYLSNKV---RKVGRVARAIAIMSHPIPNTNDSHSVQVI-LPQKQLG 693 + +G V +VP + + S + + EKR KF + +Y+++ P ++ + T T E + L N F+ H++A+ + +D +K K + + + R+ G +P+++PLYG GELPQ F R+ AV+GG Y L + +C V E K + + G+ K V + SYLS + +++RA+ I + + V ++ +P ++ G Sbjct: 278 FREGTVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEDH-PDEYKAYEET--TFSEYLKTQKLTPNLQYFVLHSIAMTSET---TSSTVDGLKATKKFLQCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAIVDQFGQRIISKHFVIEDSYLSENTCSGVQYRQISRAVLITDGSVLKPDSDQQVSILTVPAEESG 495
BLAST of CX290696 vs. ExPASy Swiss-Prot
Match: RAE1_HUMAN (Rab proteins geranylgeranyltransferase component A 1 OS=Homo sapiens GN=CHM PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15 Identity = 58/225 (25.78%), Postives = 110/225 (48.89%), Query Frame = 1 Query: 37 YNKGKVHKVPATDMEALKSPLMGIFEKRRARKFFIYVQDYDENDPKTHEGMDLTRVTTRELIAKYGLDDNTIDFIGHALALHRDDRYLNEPALDTVKRMKLYAESIARFQGGSPYIYPLYGLGELPQAFARLSAVYGGTYML-NKPECKVEFDEEGKVVGVTSE-GETAKCKKVVCDPSYL-SNKVRKV--GRVARAIAIMSHPIPNTNDSHSVQVI-LPQKQLG 693 + +G+V +VP + + S + + EKR KF + +Y E P ++G + +T E + L N + H++A+ + +D +K K + + R+ G +P+++PLYG GELPQ F R+ AV+GG Y L + +C V E K + + G+ + + + SY N +V +++RA+ I + T+ + ++ +P ++ G Sbjct: 266 FREGRVEQVPCSRADVFNSKQLTMVEKRMLMKFLTFCMEY-EKYPDEYKGYE--EITFYEYLKTQKLTPNLQYIVMHSIAMTSETA---SSTIDGLKATKNFLHCLGRY-GNTPFLFPLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAIIDQFGQRIISEHFLVEDSYFPENMCSRVQYRQISRAVLITDRSVLKTDSDQQISILTVPAEEPG 483 The following BLAST results are available for this feature:
BLAST of CX290696 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290696 ID=CX290696; Name=CX290696; organism=Citrus clementina; type=EST; length=714bpback to top |