CX290730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADB_YERPA (Fatty acid oxidation complex subunit alpha OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.398e-12 Identity = 39/139 (28.06%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 18 IPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAE 434 + +M +++R G+ +GFY Y + K P E + ++K + I+ + S++DI+ P++NE EGI AA+ D+A V G+GFP + GG+ + D+LGS + ++ L + P A+ Sbjct: 572 VDVMFDNQRFGQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMINEVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVFRYLDTLGSANYVEMAQRYAHLGALYHVPAGLRAK 706
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADB_YERP3 (Fatty acid oxidation complex subunit alpha OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.398e-12 Identity = 39/139 (28.06%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 18 IPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAE 434 + +M +++R G+ +GFY Y + K P E + ++K + I+ + S++DI+ P++NE EGI AA+ D+A V G+GFP + GG+ + D+LGS + ++ L + P A+ Sbjct: 572 VDVMFDNQRFGQKNGQGFYRYTQDAKGKPRKENDEQVDKLLA----EISQPLQEFSDEDIIARTMIPMINEVVRCLEEGIIASAAEGDMALVYGLGFPPFHGGVFRYLDTLGSANYVEMAQRYAHLGALYHVPAGLRAK 706
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADJ_SHEFN (Fatty acid oxidation complex subunit alpha OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.826e-12 Identity = 45/141 (31.91%), Postives = 73/141 (51.77%), Query Frame = 3 Query: 36 DKRAGETTRKGFYLYDERRKASP--DPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAARGA 452 D R G KGFY Y + K + D V K ++ +A + + ++E+ ++M+ NEA EGI A D DI ++ G+GFP + GG + D+LG+ + + L+ + SLYG+ F PC L + A+ G+ Sbjct: 575 DDRKGRKNGKGFYQYGPKAKKAKLVDESVYKVLDIL-----IASDKEAKGVAERCTIQML-----NEAVRCLEEGIIASARDGDIGAIFGIGFPPFLGGPFRYIDTLGASNLVATLQGYQSLYGDRFAPCDTLVKMASDGS 705
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: ECHA_HUMAN (Trifunctional enzyme subunit alpha, mitochondrial OS=Homo sapiens GN=HADHA PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 1.826e-12 Identity = 44/134 (32.84%), Postives = 69/134 (51.49%), Query Frame = 3 Query: 48 GETTRKGFYLYDE---RRKASPDPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERA 440 G + KGFY+Y E R+ + D + ++ + + PK S++DI + VNEA + EGI A+ DI +V G+GFP GG + D G++ I RL+++ + YG+ F PC LA+ A Sbjct: 629 GRKSGKGFYIYQEGVKRKDLNSDMD--------SILASLKLPPKSEVSSDEDIQFRLVTRFVNEAVMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLKKYEAAYGKQFTPCQLLADHA 754
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADJ_SALTY (Fatty acid oxidation complex subunit alpha OS=Salmonella typhimurium GN=fadJ PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.385e-12 Identity = 47/147 (31.97%), Postives = 72/147 (48.98%), Query Frame = 3 Query: 15 IIPIMQEDKRAGETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAAR 446 ++ + D R G +GFYLY E+ + S DP + K I GV ++LS + + E ++NEA F E + A D DI +V G+GFP + GG + D+LG + + L+ ++LYG + PC L A R Sbjct: 565 VVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI-------GVQGQ---SRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADJ_SALTI (Fatty acid oxidation complex subunit alpha OS=Salmonella typhi GN=fadJ PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.385e-12 Identity = 47/147 (31.97%), Postives = 72/147 (48.98%), Query Frame = 3 Query: 15 IIPIMQEDKRAGETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAAR 446 ++ + D R G +GFYLY E+ + S DP + K I GV ++LS + + E ++NEA F E + A D DI +V G+GFP + GG + D+LG + + L+ ++LYG + PC L A R Sbjct: 565 VVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI-------GVQGQ---SRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADJ_SALPK (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi A (strain AKU_12601) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.385e-12 Identity = 47/147 (31.97%), Postives = 72/147 (48.98%), Query Frame = 3 Query: 15 IIPIMQEDKRAGETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAAR 446 ++ + D R G +GFYLY E+ + S DP + K I GV ++LS + + E ++NEA F E + A D DI +V G+GFP + GG + D+LG + + L+ ++LYG + PC L A R Sbjct: 565 VVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI-------GVQGQ---SRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADJ_SALPB (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.385e-12 Identity = 47/147 (31.97%), Postives = 72/147 (48.98%), Query Frame = 3 Query: 15 IIPIMQEDKRAGETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAAR 446 ++ + D R G +GFYLY E+ + S DP + K I GV ++LS + + E ++NEA F E + A D DI +V G+GFP + GG + D+LG + + L+ ++LYG + PC L A R Sbjct: 565 VVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI-------GVQGQ---SRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADJ_SALPA (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi A GN=fadJ PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.385e-12 Identity = 47/147 (31.97%), Postives = 72/147 (48.98%), Query Frame = 3 Query: 15 IIPIMQEDKRAGETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAAR 446 ++ + D R G +GFYLY E+ + S DP + K I GV ++LS + + E ++NEA F E + A D DI +V G+GFP + GG + D+LG + + L+ ++LYG + PC L A R Sbjct: 565 VVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI-------GVQGQ---SRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADJ_SALNS (Fatty acid oxidation complex subunit alpha OS=Salmonella newport (strain SL254) GN=fadJ PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.385e-12 Identity = 47/147 (31.97%), Postives = 72/147 (48.98%), Query Frame = 3 Query: 15 IIPIMQEDKRAGETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAAR 446 ++ + D R G +GFYLY E+ + S DP + K I GV ++LS + + E ++NEA F E + A D DI +V G+GFP + GG + D+LG + + L+ ++LYG + PC L A R Sbjct: 565 VVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI-------GVQGQ---SRLSAQQVAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701 The following BLAST results are available for this feature:
BLAST of CX290730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290730 ID=CX290730; Name=CX290730; organism=Citrus clementina; type=EST; length=670bpback to top |