CX290730
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADJ_SHESA (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain ANA-3) GN=fadJ PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12 Identity = 45/141 (31.91%), Postives = 72/141 (51.06%), Query Frame = 3 Query: 36 DKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGV--AINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAARGA 452 D R G KGFY Y KAS + K E ++ G+ ++ + ++E+ +V+M+ NEA +GI D DI ++ G+GFP + GG + D+LG+ + + LE + + YG+ F+PC L AA A Sbjct: 573 DDRKGRKNGKGFYQYAAGNKASS--KKKAVDESVYAVLGIKPGMDKDLSAVAERCVVQML-----NEAVRCLDDGIIASPRDGDIGAIFGIGFPPFLGGPFHYIDTLGADNLVNILERYQAQYGDRFEPCPRLKAMAAEKA 706
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADJ_SHELP (Fatty acid oxidation complex subunit alpha OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadJ PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12 Identity = 47/144 (32.64%), Postives = 72/144 (50.00%), Query Frame = 3 Query: 36 DKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGV-----AINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAARGA 452 D R G KGFY Y + K KK +++ S+ GV + + L+E+ +V+M+ NEA EGI D DI ++ G+GFP + GG + DSLG+K++ L+ + +G+ F PC L E A G+ Sbjct: 573 DDRKGRKNGKGFYQYGAKSK-------KKLVDE--SVYGVLGLTPGADGEPIALAERCVVQML-----NEAVRCLEEGIIASPRDGDIGAIFGIGFPPFLGGPFRYMDSLGAKHLVETLKRYQDQFGDRFAPCDRLVEMAESGS 702
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADJ_SALSV (Fatty acid oxidation complex subunit alpha OS=Salmonella schwarzengrund (strain CVM19633) GN=fadJ PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12 Identity = 46/147 (31.29%), Postives = 72/147 (48.98%), Query Frame = 3 Query: 15 IIPIMQEDKRAGETTRKGFYLYDERRKASP---DPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAAR 446 ++ + D R G +GFYLY E+ + S DP + K I GV ++LS + + + ++NEA F E + A D DI +V G+GFP + GG + D+LG + + L+ ++LYG + PC L A R Sbjct: 565 VVASILNDDRKGRKNGRGFYLYGEKGRKSKKQVDPAIYKLI-------GVQGQ---SRLSAQQVADRCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDALGPGEMVATLQRLAALYGPRYAPCEQLVRMAER 701
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: ECHP_HUMAN (Peroxisomal bifunctional enzyme OS=Homo sapiens GN=EHHADH PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12 Identity = 43/146 (29.45%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 24 IMQEDKRAGETTRKGFYLYDER--RKASPDPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEF--FKPCAFLAERAARG 449 ++ E R G+ T KG+Y YD+ R PDP + KF+ + R I P+ +S+ +I+E + ++NEA + EGIA +D+ + G G+P ++GG MF+A ++G + +L+++ + +P +L + A++G Sbjct: 564 VLCELGRFGQKTGKGWYQYDKPLGRIHKPDPWLSKFLSRYRKTHH--IEPR--TISQDEILERCLYSLINEAFRILGEGIAASPEHIDVVYLHGYGWPRHKGGPMFYASTVGLPTVLEKLQKYYRQNPDIPQLEPSDYLKKLASQG 705
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADJ_CITK8 (Fatty acid oxidation complex subunit alpha OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadJ PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12 Identity = 44/148 (29.73%), Postives = 70/148 (47.30%), Query Frame = 3 Query: 15 IIPIMQEDKRAGETTRKGFYLYD---ERRKASPDPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAARG 449 ++ + D R G +GFYLY + K DP + + I ++LS + + E ++NEA F E + A D DI +V G+GFP + GG + D+LG+ + + L+ ++ YG+ F PC L A RG Sbjct: 565 VVASILNDDRKGRKNGRGFYLYGVKGRKSKKQVDPAIYRLIGTQGQ----------SRLSAQQMAERCVMLMLNEAARCFDEKVIRSARDGDIGAVFGIGFPPFLGGPFRYMDTLGAGEVVAVLQRLATQYGDRFTPCERLLRMAERG 702
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADB_PSESM (Fatty acid oxidation complex subunit alpha OS=Pseudomonas syringae pv. tomato GN=fadB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12 Identity = 43/148 (29.05%), Postives = 74/148 (50.00%), Query Frame = 3 Query: 18 IPIMQEDKRAGETTRKGFYLYDERRKASP----DPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAARG 449 + + E R G+ KGFY+Y+ +K P DP V ++ I + ++S++DI+ + P+ E +GI AA+ D+ + G+GFP +RGG + + DS+G + + ++ L G ++P A L E AA G Sbjct: 572 VDALYEANRLGQKNGKGFYVYETDKKGKPKKVNDPAVLDVLKP--------IVYEQREVSDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLIYGIGFPPFRGGALRYIDSIGVAEFVALADRYAEL-GALYQPTAKLREMAANG 710
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADJ_SHEHH (Fatty acid oxidation complex subunit alpha OS=Shewanella halifaxensis (strain HAW-EB4) GN=fadJ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.063e-12 Identity = 44/140 (31.43%), Postives = 72/140 (51.43%), Query Frame = 3 Query: 36 DKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGV--AINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAARG 449 D R G KGFYLY ++KA K+ + S+ G+ ++ + +++++ +V+M+ NEA E I D DI ++ G+GFP + GG + D+LG+ + LE + S YG F+P A L + A G Sbjct: 575 DDRKGRKNGKGFYLYGGKKKA------KEVDQTVYSVLGLKPGVDTEATEVAQRCVVQML-----NEAVRCLEESIIACPRDGDIGAIFGIGFPPFLGGPFHYIDTLGAANLVKILENYQSRYGSRFEPAAKLKQMAEEG 703
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: ECHA_MOUSE (Trifunctional enzyme subunit alpha, mitochondrial OS=Mus musculus GN=Hadha PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.063e-12 Identity = 43/132 (32.58%), Postives = 65/132 (49.24%), Query Frame = 3 Query: 48 GETTRKGFYLYDERRK-ASPDPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERA 440 G + KGFY+Y E K S + E+ + R + ++ S++D+ + VNEA L EGI A+ DI +V G+GFP GG + D G++ + RL ++ S YG F PC L + A Sbjct: 629 GRKSGKGFYIYQEGSKNKSLNSEMDNILANLRLPAKPEVS------SDEDVQYRVITRFVNEAVLCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKVVDRLRKYESAYGTQFTPCQLLLDHA 754
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: ECHA_PIG (Trifunctional enzyme subunit alpha, mitochondrial OS=Sus scrofa GN=HADHA PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.184e-11 Identity = 43/132 (32.58%), Postives = 66/132 (50.00%), Query Frame = 3 Query: 48 GETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAA 443 G + KGFY+Y E K + V E + + P + S++DI + VNEA L EGI A+ DI +V G+GFP GG + D G++ + RL ++ ++YG+ F PC L + A+ Sbjct: 629 GRKSGKGFYVYQEGVK---NRNVNSDTESILASLKIPSRPDIS--SDEDIQYRLVTRFVNEAVLCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKVVDRLRKYEAIYGKQFTPCQLLIDHAS 755
BLAST of CX290730 vs. ExPASy Swiss-Prot
Match: FADB_SHISS (Fatty acid oxidation complex subunit alpha OS=Shigella sonnei (strain Ss046) GN=fadB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.546e-11 Identity = 46/155 (29.68%), Postives = 69/155 (44.52%), Query Frame = 3 Query: 18 IPIMQEDKRAGETTRKGFYLYDERRKASPDPEVKKFIEKARSMSGVAINPKFAKLSEKDIVEMIFFPVVNEACLVFAEGIAVKAADLDIASVMGMGFPVYRGGIMFWADSLGSKYIYSRLEEWSSLYGEFFKPCAFLAERAARGATLSAPVEQAK 482 I + + R G+ GF+ Y E K P E +E + PK SE++I+ + P+VNE EGI A+ D+A V G+GFP + GG W D+LGS +++ L G ++ L +A PVE A+ Sbjct: 572 IDALFDANRFGQKNGLGFWRYKEDSKGKPKKEEDAAVE---DLLAEVSQPK-RDFSEEEIIARMMIPMVNEVVRCLEEGIIATPAEADMALVYGLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHL-GPLYEVPEGLRNKARHNEPYYPPVEPAR 721 The following BLAST results are available for this feature:
BLAST of CX290730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290730 ID=CX290730; Name=CX290730; organism=Citrus clementina; type=EST; length=670bpback to top |