CX290765

Overview
NameCX290765
Unique NameCX290765
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length570
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX290765 vs. ExPASy Swiss-Prot
Match: CD48D_ARATH (Cell division control protein 48 homolog D OS=Arabidopsis thaliana GN=CDC48D PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.704e-28
Identity = 69/168 (41.07%), Postives = 105/168 (62.50%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGE--GNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLCK 495
            LAKA+A E  + F SI   +L++ W  ESE  V  +F  AR+SAP ++F DE+DS+  QRG   G+   A+ R+  +LL +M G+ +  + V ++ ATN P  +D A+ R  R D+ IYIPLPD ++R  +FK  L  +P    + D  +LA+ T+GFSG+DI+ +C+
Sbjct:  531 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGM-NAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSP-VAKDVDLRALAKYTQGFSGADITEICQ 696

HSP 2 Score: 105.145 bits (261), Expect = 2.467e-22
Identity = 65/166 (39.16%), Postives = 101/166 (60.84%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTES-DFESLARKTEGFSGSDISRLC 492
            +A+AVA E  + FF I+  +++SK   ESE  +   F+ A ++APSIIFIDEIDS+  +R E    +  RRI ++LL  M G+  +   V+V+ ATN P ++D A+RR  RFD+ I I +PD   R  + ++H  +    L E  D E +++ T G+ G+D++ LC
Sbjct:  258 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-EKTHGEVERRIVSQLLTLMDGL-KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNM--KLAEDVDLERVSKDTHGYVGADLAALC 419
[Close]
BLAST of CX290765 vs. ExPASy Swiss-Prot
Match: CDC48_ENCCU (Cell division control protein 48 OS=Encephalitozoon cuniculi GN=CDC48 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.756e-28
Identity = 72/167 (43.11%), Postives = 101/167 (60.48%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQR-GEGNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLCK 495
            LAKAVATE  + F SI   +L+S W+ ESE  +  LF  AR +AP ++F DEIDS+   R G    S A+ R+  +LL +M G+ +  + V V+ ATN P  LD A+ R  R D+ +YIPLPDL +R  + +  L  TP +  E D   LA  T+ FSG+D+S +C+
Sbjct:  531 LAKAVATECKANFISIKGPELLSMWVGESESNIRDLFARARGAAPCVLFFDEIDSIAKARSGNDGSSGATDRMLNQLLSEMDGI-NQKKNVFVIGATNRPDQLDSALMRPGRLDQLVYIPLPDLDSRVSILQATLKKTPLS-PEIDLRQLAEATDKFSGADLSEICQ 695

HSP 2 Score: 102.449 bits (254), Expect = 1.599e-21
Identity = 60/165 (36.36%), Postives = 101/165 (61.21%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLC 492
            +A+A+A E  +  F I+  +++SK   ESE  +   F+ A +++P+IIFIDEID+L  +R E ++ +  RRI ++LL  M G+      V+VL ATN P ++D A+RR  RFD+ I I +PD   R  + ++H  +   +  + D  ++ ++  GF+GSD++ LC
Sbjct:  258 IARAIANETGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPKR-EKSQGEVERRIVSQLLTLMDGMKAR-SNVIVLGATNRPNSIDPALRRYGRFDREIEIGVPDETGRLEILRIHTKNMKMS-EDVDLVAINKELHGFTGSDLASLC 419
[Close]
BLAST of CX290765 vs. ExPASy Swiss-Prot
Match: CD48E_ARATH (Cell division control protein 48 homolog E OS=Arabidopsis thaliana GN=CDC48E PE=2 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 1.951e-27
Identity = 68/168 (40.48%), Postives = 104/168 (61.90%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGE--GNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLCK 495
            LAKA+A E  + F S+   +L++ W  ESE  V  +F  AR+SAP ++F DE+DS+  QRG   G+   A+ R+  +LL +M G+ +  + V ++ ATN P  +D A+ R  R D+ IYIPLPD  +R  +FK  L  +P    + D  +LA+ T+GFSG+DI+ +C+
Sbjct:  530 LAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGM-NAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSP-VAKDVDVTALAKYTQGFSGADITEICQ 695

HSP 2 Score: 105.531 bits (262), Expect = 1.889e-22
Identity = 65/166 (39.16%), Postives = 101/166 (60.84%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTES-DFESLARKTEGFSGSDISRLC 492
            +A+AVA E  + FF I+  +++SK   ESE  +   F+ A ++APSIIFIDEIDS+  +R E    +  RRI ++LL  M G+  +   V+V+ ATN P ++D A+RR  RFD+ I I +PD   R  + ++H  +    L E  D E +++ T G+ G+D++ LC
Sbjct:  257 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-EKTNGEVERRIVSQLLTLMDGL-KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNM--KLAEDVDLERISKDTHGYVGADLAALC 418
[Close]
BLAST of CX290765 vs. ExPASy Swiss-Prot
Match: TERA_DROME (Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster GN=TER94 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.327e-27
Identity = 66/168 (39.29%), Postives = 103/168 (61.31%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRG--EGNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLCK 495
            LAKA+A E  + F S+   +L++ W  ESE  V  +F  AR +AP ++F DE+DS+   RG   G+   A+ R+  ++L +M G+G   + V ++ ATN P  +D AI R  R D+ IYIPLPD K+R+ + K +L  +P    E D   +A+ T+GFSG+D++ +C+
Sbjct:  524 LAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMGAK-KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSP-LAKEVDLTYIAKVTQGFSGADLTEICQ 689

HSP 2 Score: 101.679 bits (252), Expect = 2.728e-21
Identity = 59/165 (35.76%), Postives = 100/165 (60.61%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLC 492
            +A+AVA E  + FF I+  +++SK   ESE  +   F+ A +++P+IIFIDEID++  +R +    +  RRI ++LL  M G+      ++V+AATN P ++D A+RR  RFD+ I I +PD   R  + ++H  +   +  + D E +A ++ G  G+D++ LC
Sbjct:  251 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKR-DKTHGEVERRIVSQLLTLMDGM-KKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLH-DDVDLEQIAAESHGHVGADLASLC 412
[Close]
BLAST of CX290765 vs. ExPASy Swiss-Prot
Match: CD48A_ARATH (Cell division control protein 48 homolog A OS=Arabidopsis thaliana GN=CDC48A PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 3.327e-27
Identity = 68/169 (40.24%), Postives = 104/169 (61.54%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESK---ASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLCK 495
            LAKA+A E  + F S+   +L++ W  ESE  V  +F  AR+SAP ++F DE+DS+  QRG G+      A+ R+  +LL +M G+ +  + V ++ ATN P  +D A+ R  R D+ IYIPLPD  +R  +FK  L  +P    + D  +LA+ T+GFSG+DI+ +C+
Sbjct:  530 LAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGM-NAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSP-IAKDVDIGALAKYTQGFSGADITEICQ 696

HSP 2 Score: 105.531 bits (262), Expect = 1.889e-22
Identity = 65/166 (39.16%), Postives = 101/166 (60.84%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTES-DFESLARKTEGFSGSDISRLC 492
            +A+AVA E  + FF I+  +++SK   ESE  +   F+ A ++APSIIFIDEIDS+  +R E    +  RRI ++LL  M G+  +   V+V+ ATN P ++D A+RR  RFD+ I I +PD   R  + ++H  +    L E  D E +++ T G+ G+D++ LC
Sbjct:  257 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR-EKTNGEVERRIVSQLLTLMDGL-KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNM--KLAEDVDLERISKDTHGYVGADLAALC 418
[Close]
BLAST of CX290765 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3)

HSP 1 Score: 120.553 bits (301), Expect = 5.675e-27
Identity = 67/168 (39.88%), Postives = 102/168 (60.71%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGE--GNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLCK 495
            LAKA+A E  + F SI   +L++ W  ESE  V  +F  AR++AP ++F DE+DS+   RG   G+   A+ R+  ++L +M G+    + V ++ ATN P  +D AI R  R D+ IYIPLPD K+R  + K +L  +P    + D E LA+ T GFSG+D++ +C+
Sbjct:  527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSP-VAKDVDLEFLAKMTNGFSGADLTEICQ 692

HSP 2 Score: 103.605 bits (257), Expect = 7.179e-22
Identity = 61/165 (36.97%), Postives = 99/165 (60.00%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLC 492
            +A+AVA E  + FF I+  +++SK   ESE  +   F+ A ++AP+IIFIDE+D++  +R E    +  RRI ++LL  M G+      V+V+AATN P ++D A+RR  RFD+ + I +PD   R  + ++H  +      + D E +A +T G  G+D++ LC
Sbjct:  254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-EKTHGEVERRIVSQLLTLMDGLKQR-AHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALC 415
[Close]
BLAST of CX290765 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5)

HSP 1 Score: 120.553 bits (301), Expect = 5.675e-27
Identity = 67/168 (39.88%), Postives = 102/168 (60.71%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGE--GNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLCK 495
            LAKA+A E  + F SI   +L++ W  ESE  V  +F  AR++AP ++F DE+DS+   RG   G+   A+ R+  ++L +M G+    + V ++ ATN P  +D AI R  R D+ IYIPLPD K+R  + K +L  +P    + D E LA+ T GFSG+D++ +C+
Sbjct:  527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSP-VAKDVDLEFLAKMTNGFSGADLTEICQ 692

HSP 2 Score: 103.605 bits (257), Expect = 7.179e-22
Identity = 61/165 (36.97%), Postives = 99/165 (60.00%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLC 492
            +A+AVA E  + FF I+  +++SK   ESE  +   F+ A ++AP+IIFIDE+D++  +R E    +  RRI ++LL  M G+      V+V+AATN P ++D A+RR  RFD+ + I +PD   R  + ++H  +      + D E +A +T G  G+D++ LC
Sbjct:  254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-EKTHGEVERRIVSQLLTLMDGLKQR-AHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALC 415
[Close]
BLAST of CX290765 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4)

HSP 1 Score: 120.553 bits (301), Expect = 5.675e-27
Identity = 67/168 (39.88%), Postives = 102/168 (60.71%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGE--GNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLCK 495
            LAKA+A E  + F SI   +L++ W  ESE  V  +F  AR++AP ++F DE+DS+   RG   G+   A+ R+  ++L +M G+    + V ++ ATN P  +D AI R  R D+ IYIPLPD K+R  + K +L  +P    + D E LA+ T GFSG+D++ +C+
Sbjct:  527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSP-VAKDVDLEFLAKMTNGFSGADLTEICQ 692

HSP 2 Score: 103.605 bits (257), Expect = 7.179e-22
Identity = 61/165 (36.97%), Postives = 99/165 (60.00%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLC 492
            +A+AVA E  + FF I+  +++SK   ESE  +   F+ A ++AP+IIFIDE+D++  +R E    +  RRI ++LL  M G+      V+V+AATN P ++D A+RR  RFD+ + I +PD   R  + ++H  +      + D E +A +T G  G+D++ LC
Sbjct:  254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-EKTHGEVERRIVSQLLTLMDGLKQR-AHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALC 415
[Close]
BLAST of CX290765 vs. ExPASy Swiss-Prot
Match: TERA_HUMAN (Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP PE=1 SV=4)

HSP 1 Score: 120.553 bits (301), Expect = 5.675e-27
Identity = 67/168 (39.88%), Postives = 102/168 (60.71%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGE--GNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLCK 495
            LAKA+A E  + F SI   +L++ W  ESE  V  +F  AR++AP ++F DE+DS+   RG   G+   A+ R+  ++L +M G+    + V ++ ATN P  +D AI R  R D+ IYIPLPD K+R  + K +L  +P    + D E LA+ T GFSG+D++ +C+
Sbjct:  527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSP-VAKDVDLEFLAKMTNGFSGADLTEICQ 692

HSP 2 Score: 103.605 bits (257), Expect = 7.179e-22
Identity = 61/165 (36.97%), Postives = 99/165 (60.00%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLC 492
            +A+AVA E  + FF I+  +++SK   ESE  +   F+ A ++AP+IIFIDE+D++  +R E    +  RRI ++LL  M G+      V+V+AATN P ++D A+RR  RFD+ + I +PD   R  + ++H  +      + D E +A +T G  G+D++ LC
Sbjct:  254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-EKTHGEVERRIVSQLLTLMDGLKQR-AHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALC 415
[Close]
BLAST of CX290765 vs. ExPASy Swiss-Prot
Match: TERA_BOVIN (Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.675e-27
Identity = 67/168 (39.88%), Postives = 102/168 (60.71%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGE--GNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLCK 495
            LAKA+A E  + F SI   +L++ W  ESE  V  +F  AR++AP ++F DE+DS+   RG   G+   A+ R+  ++L +M G+    + V ++ ATN P  +D AI R  R D+ IYIPLPD K+R  + K +L  +P    + D E LA+ T GFSG+D++ +C+
Sbjct:  527 LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSP-VAKDVDLEFLAKMTNGFSGADLTEICQ 692

HSP 2 Score: 103.605 bits (257), Expect = 7.179e-22
Identity = 61/165 (36.97%), Postives = 99/165 (60.00%), Query Frame = 1 
Query:    4 LAKAVATEADSTFFSISSSDLVSKWMVESEKLVSSLFQMARESAPSIIFIDEIDSLCGQRGEGNESKASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRR--RFDKRIYIPLPDLKARQLMFKVHLGDTPHNLTESDFESLARKTEGFSGSDISRLC 492
            +A+AVA E  + FF I+  +++SK   ESE  +   F+ A ++AP+IIFIDE+D++  +R E    +  RRI ++LL  M G+      V+V+AATN P ++D A+RR  RFD+ + I +PD   R  + ++H  +      + D E +A +T G  G+D++ LC
Sbjct:  254 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR-EKTHGEVERRIVSQLLTLMDGLKQR-AHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNM-KLADDVDLEQVANETHGHVGADLAALC 415
The following BLAST results are available for this feature:
BLAST of CX290765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 368
Match NameE-valueIdentityDescription
CD48D_ARATH6.704e-2841.07Cell division control protein 48 homolog D OS=Arab... [more]
CDC48_ENCCU8.756e-2843.11Cell division control protein 48 OS=Encephalitozoo... [more]
CD48E_ARATH1.951e-2740.48Cell division control protein 48 homolog E OS=Arab... [more]
TERA_DROME3.327e-2739.29Transitional endoplasmic reticulum ATPase TER94 OS... [more]
CD48A_ARATH3.327e-2740.24Cell division control protein 48 homolog A OS=Arab... [more]
TERA_RAT5.675e-2739.88Transitional endoplasmic reticulum ATPase OS=Rattu... [more]
TERA_PIG5.675e-2739.88Transitional endoplasmic reticulum ATPase OS=Sus s... [more]
TERA_MOUSE5.675e-2739.88Transitional endoplasmic reticulum ATPase OS=Mus m... [more]
TERA_HUMAN5.675e-2739.88Transitional endoplasmic reticulum ATPase OS=Homo ... [more]
TERA_BOVIN5.675e-2739.88Transitional endoplasmic reticulum ATPase OS=Bos t... [more]

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Properties
Property NameValue
Genbank descriptionC02026H12SK IF1 Citrus clementina cDNA clone C02026H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290765 ID=CX290765; Name=CX290765; organism=Citrus clementina; type=EST; length=570bp
TACCTGGCCAAGGCTGTTGCAACTGAAGCCGACTCTACATTTTTCAGTAT
TTCTTCATCAGACCTGGTTTCAAAGTGGATGGTTGAAAGTGAAAAGCTTG
TCTCAAGCCTTTTCCAGATGGCTCGTGAAAGTGCTCCTTCCATTATTTTT
ATTGATGAAATAGATTCCTTATGTGGTCAGCGTGGAGAAGGCAATGAGAG
CAAAGCTTCTCGGCGCATCAAAACTGAACTTCTTGTACAGATGCAGGGTG
TTGGACACAACGATCAGAAAGTTCTTGTTCTTGCTGCAACAAATACTCCC
TATGCTCTAGATCAGGCCATCCGGCGACGTTTTGACAAGCGTATATACAT
CCCTCTTCCAGATTTGAAGGCAAGACAGCTCATGTTCAAGGTGCATTTAG
GAGATACACCCCACAACTTGACTGAAAGTGATTTTGAAAGTTTAGCTCGC
AAGACCGAGGGGTTTTCTGGCTCTGATATTTCCCGTTTGTGTAAAGGATG
TCTTGGTTGAACCTGTACAGAAAACTCAGGATGCCATGTTTTTCTTTAAG
ACCTCTAATGGTATGTGGAT
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