CX290808

Overview
NameCX290808
Unique NameCX290808
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH1_GADCA (Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.951e-46
Identity = 85/174 (48.85%), Postives = 122/174 (70.11%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+   G  + GA RII VD NP+K EKAK FG T+F+NPND++EP+ QV+ ++T+GG D+S EC+G+ G++  AL+SC  GWG++V +G   L  +VA      ++GRT KGS+FGG+K K  +P +V  YL K+  +DEFITH +  E +N A +LMK GKC+R+V+ +
Sbjct:  202 GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH-DVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 374          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 3.327e-46
Identity = 86/174 (49.43%), Postives = 120/174 (68.97%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+V  G K  GASRIIGVD N +K  KAK FG +E +NP D ++P+Q+V+  +TDGG DYSFECIG+  ++  AL++C  GWG++V +GV     E+A      ++GRT KG+ FGGWK    +P LV+ Y+ K+  VDEF+TH+L F+ IN+AF LM  GK +R+V+ +
Sbjct:  201 GGVGLAVIMGCKVAGASRIIGVDINKDKFAKAKEFGASECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESIPKLVSEYMSKKIKVDEFVTHSLSFDQINEAFELMHAGKSIRTVVKL 374          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH2_MAIZE (Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 3.327e-46
Identity = 87/174 (50.00%), Postives = 124/174 (71.26%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+  +GA+  GASRIIGVD NP K E+AK FG TEF+NP D+++PVQ+V+  +T+GG D S EC G+   + +A +   DGWG+AV +GVP    +   H   FLS +TLKG+ FG +KP+TDLP++V  Y+KKE  +++FITH++ F +IN AF+LM +G+ LR ++ M
Sbjct:  204 GAVGLAAMEGARLAGASRIIGVDINPAKYEQAKKFGCTEFVNPKDHDKPVQEVLIELTNGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPHKDDQFKTHPMNFLSEKTLKGTFFGNYKPRTDLPNVVEMYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCIMRM 377          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.413e-46
Identity = 85/172 (49.42%), Postives = 116/172 (67.44%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 529
            G VGL+V  G K  GA+RIIG+D NP K E AK FG TEF+NP D+++P+Q+V+  +TDGG DYSFECIG+  ++  AL++C  GWG +V +GV     E++      ++GR  KG+ FGGWK    +P LV  Y+ K+  VDEF+TH L FE IN+ F LM  GK +R+V+
Sbjct:  203 GAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGATEFVNPKDHSKPIQEVLVEMTDGGVDYSFECIGNVQIMRAALEACHKGWGESVIIGVAGAGQEISTRPFQLVTGRVWKGTAFGGWKSVESVPKLVEDYMSKKLKVDEFVTHTLPFEKINEGFELMHAGKSIRTVL 374          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSJ (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=ADH1 PE=2 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 7.413e-46
Identity = 87/174 (50.00%), Postives = 123/174 (70.69%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+ A+GA+  GASRIIG+D N  + E+A+ FG TEF+NP D+++PVQQV+  +T+GG D S EC G+   +  A +   DGWG+AV +GVP    E   H   FL+ RTLKG+ FG +KP+TDLP++V  Y+KKE  V++FITH++ F +IN AF+LM +G+ +R +I M
Sbjct:  204 GAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRM 377          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH1_ORYSI (Alcohol dehydrogenase 1 OS=Oryza sativa subsp. indica GN=ADH1 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 7.413e-46
Identity = 87/174 (50.00%), Postives = 123/174 (70.69%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+ A+GA+  GASRIIG+D N  + E+A+ FG TEF+NP D+++PVQQV+  +T+GG D S EC G+   +  A +   DGWG+AV +GVP    E   H   FL+ RTLKG+ FG +KP+TDLP++V  Y+KKE  V++FITH++ F +IN AF+LM +G+ +R +I M
Sbjct:  204 GAVGLAAAEGARIAGASRIIGIDLNANRFEEARKFGCTEFVNPKDHDKPVQQVLAEMTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINTAFDLMHKGEGIRCIIRM 377          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.681e-46
Identity = 89/174 (51.15%), Postives = 123/174 (70.69%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+ A+GA+  GASRIIGVD N  + E+AK FGVTEF+NP D ++PVQ+VI  +TDGG D S EC G    + +A +   DGWG+AV +GVP  +     H   FL+ RTLKG+ FG +KP++D+PS+V +Y+ KE  +++FITH L F +IN+AF+LM +G+ LR +I M
Sbjct:  205 GAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITM 378          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 9.681e-46
Identity = 89/174 (51.15%), Postives = 123/174 (70.69%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+ A+GA+  GASRIIGVD N  + E+AK FGVTEF+NP D ++PVQ+VI  +TDGG D S EC G    + +A +   DGWG+AV +GVP  +     H   FL+ RTLKG+ FG +KP++D+PS+V +Y+ KE  +++FITH L F +IN+AF+LM +G+ LR +I M
Sbjct:  205 GAVGLAAAEGARIAGASRIIGVDLNASRFEQAKKFGVTEFVNPKDYSKPVQEVIAEMTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITM 378          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.264e-45
Identity = 88/174 (50.57%), Postives = 120/174 (68.97%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+ A+GA+  GASRIIGVD N  + E+AK FG+TEF+NP D+ +PVQ+VI  +T+GG D S EC G+   +  A +   DGWG+AV +GVP        H   FL+ RTLKG+ FG +KP+TD+PS+V +Y+ KE  VD+FITH L F  IN+AF+ M +G+ +R +I M
Sbjct:  205 GAVGLAAAEGARMAGASRIIGVDLNSNRFEEAKKFGITEFVNPKDHKKPVQEVIAELTNGGVDRSIECTGNIQAMIPAFECVHDGWGVAVLVGVPHKDAVFTTHPMNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELEVDKFITHQLPFSQINKAFDYMLKGEGIRCIITM 378          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH1_HORVU (Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.651e-45
Identity = 88/174 (50.57%), Postives = 122/174 (70.11%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+ A+GA+  GASRIIGVD N  + E+A+ FG TEF+NP D+ +PVQQV+  +T+GG D S EC G+   +  A +   DGWG+AV +GVP    E   H   FL+ RTLKG+ FG +KP+TDLP++V  Y+KKE  V++FITH++ F +IN AF+LM +G+ +R +I M
Sbjct:  204 GAVGLAAAEGARIAGASRIIGVDLNAVRFEEARKFGCTEFVNPKDHTKPVQQVLADMTNGGVDRSVECTGNVNAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVEMYMKKELEVEKFITHSVPFSEINTAFDLMAKGEGIRCIIRM 377          
The following BLAST results are available for this feature:
BLAST of CX290808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
ADH1_GADCA1.951e-4648.85Alcohol dehydrogenase 1 OS=Gadus callarias PE=1 SV... [more]
ADHX_HORSE3.327e-4649.43Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADH2_MAIZE3.327e-4650.00Alcohol dehydrogenase 2 OS=Zea mays GN=ADH2 PE=2 S... [more]
ADHX_SPAAU7.413e-4649.42Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADH1_ORYSJ7.413e-4650.00Alcohol dehydrogenase 1 OS=Oryza sativa subsp. jap... [more]
ADH1_ORYSI7.413e-4650.00Alcohol dehydrogenase 1 OS=Oryza sativa subsp. ind... [more]
ADH3_SOLTU9.681e-4651.15Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU9.681e-4651.15Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH_FRAAN1.264e-4550.57Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH1_HORVU1.651e-4550.57Alcohol dehydrogenase 1 OS=Hordeum vulgare GN=ADH1... [more]

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Properties
Property NameValue
Genbank descriptionC02027D07SK IF1 Citrus clementina cDNA clone C02027D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290808 ID=CX290808; Name=CX290808; organism=Citrus clementina; type=EST; length=671bp
GGATTCGGCCGAGGGAACTGTAGGCCTTTCTGTTGCACAAGGTGCAAAAG
CCAGAGGAGCGTCTAGAATTATTGGCGTTGACACTAACCCTGAGAAATGT
GAAAAAGCCAAAGCTTTTGGAGTTACAGAGTTTCTCAACCCAAATGATAA
TAATGAACCTGTTCAACAGGTTATTAAGAGAATTACTGATGGAGGGGCAG
ATTACTCGTTTGAATGTATTGGTGATACAGGAATGATAACTACTGCTTTA
CAATCTTGCTGTGATGGATGGGGTCTTGCAGTGACTCTTGGTGTACCAAA
ACTGAAGCCCGAAGTAGCAGCACACTATGGACTGTTTCTAAGTGGAAGAA
CACTGAAAGGCTCTCTATTTGGTGGATGGAAACCTAAAACTGACCTTCCT
TCATTAGTAAACAGGTATCTTAAAAAGGAGTTCATGGTCGATGAGTTTAT
CACCCATAATCTCCTGTTCGAGGATATCAATCAAGCTTTTAATCTCATGA
AAGAAGGGAAATGTTTGCGCAGTGTAATTCATATGCCGAAATAGTTATGT
TTGGGTTATCGAAACCAAGAAATAGAGACCAAACAACACTGTGGTCAGAT
GGATGAATGCACAAGTGATAATGCACAGCATTTGTGGAGATCTATGAGAA
GTATGTAGCTCTGTTCTTTTT
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