CX290808
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3) HSP 1 Score: 130.568 bits (327), Expect = 7.447e-30 Identity = 73/172 (42.44%), Postives = 105/172 (61.05%), Query Frame = 2 Query: 14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 529 G VG S G KA GASRIIGV T+ +K KA G TE LNP D ++P+ +VI T+GG DY+ EC G + ALQS G G+ V LG+ + L L+GR+LKGS+FGG+K + ++ LV+ Y+KK+ V+ ++ L + IN+AF L+ G+ +RS++ Sbjct: 201 GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKGE-EVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQGVRSIM 371
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: FADH_AMYME (NAD/mycothiol-dependent formaldehyde dehydrogenase OS=Amycolatopsis methanolica PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16 Identity = 57/176 (32.39%), Postives = 92/176 (52.27%), Query Frame = 2 Query: 14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGL---FLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVI 529 G VG +V GA+ GA++II VD + +K E A G T +N + + V + ++ +T G GAD + +G A + D G V +GVP P++ L F G LK S +G P+ D P L++ +L+ +D+F+T + +D+ +AF+ M G+ LRSV+ Sbjct: 188 GAVGDAVIAGARLAGANKIIAVDRDAKKLEWATELGATHTVNATETD--VVEAVQALTGGFGADVVIDAVGRPETWKQAFYAR-DLAGTVVLVGVPT--PDMRLEMPLLDFFSRGGALKSSWYGDCLPERDFPVLIDLHLQGRLPLDKFVTERISLDDVEKAFHTMHAGEVLRSVV 358
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: YPHC_ECOLI (Uncharacterized zinc-type alcohol dehydrogenase-like protein yphC OS=Escherichia coli (strain K12) GN=yphC PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 7.482e-14 Identity = 64/179 (35.75%), Postives = 84/179 (46.93%), Query Frame = 2 Query: 14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLG-VPKLKPEVAA---HYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMP 538 G VG+ AK RGA RIIGVD PE+ AK GV + E + Q+I +T GGAD + +C G+ ALQS D WG V +G K++ EV+A H+ + G + SLF K DL + ITH E A+ LM GKC + VI+ P Sbjct: 184 GPVGMMAMMLAKGRGAKRIIGVDMLPERLAMAKQLGVMDH-GYLATTEGLPQIIAELTHGGADVALDCSGNAAGRLLALQSTAD-WGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVT-SLFHMEKCAHDLTDW-------KLWPRNAITHRFSLEQAGDAYALMASGKCGKVVINFP 352
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH_THEBR (NADP-dependent alcohol dehydrogenase OS=Thermoanaerobacter brockii GN=adh PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.560e-11 Identity = 51/168 (30.36%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDG-GADYSFECIGDTGMITTALQSCCDGWGLAVT--LGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLL-FEDINQAFNLMKE 505 G VGL GAK RGA RII V + P + AK +G T+ +N D P++ I +T+G G D + G+ ++ TA++ G +A G ++ P +G ++ +T+KG L G + + + L++ K + +TH F++I +AF LMK+ Sbjct: 176 GPVGLMAVAGAKLRGAGRIIAVGSRPVCVDAAKYYGATDIVNYKDG--PIESQIMNLTEGKGVDAAIIAGGNADIMATAVKIVKPGGTIANVNYFGEGEVLPVPRLEWGCGMAHKTIKGGLCPGGRLR--MERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKD 339
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: XYLB_PSEPU (Aryl-alcohol dehydrogenase OS=Pseudomonas putida GN=xylB PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11 Identity = 52/174 (29.89%), Postives = 79/174 (45.40%), Query Frame = 2 Query: 14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535 G VGLS A G + II VD + E A G T +NP N+P+ + IK I G Y E G ++T A+ S G + + +G P + V L R L+G + G +P LV Y + +F D+ I F++IN+A ++G L+ V+ + Sbjct: 196 GAVGLSAVMAAVVAGCTTIIAVDVKENRLELASELGATHIINP-AANDPI-EAIKEIFADGVPYVLETSGLPAVLTQAILSSAIGGEIGI-VGAPPMGATVPVDINFLLFNRKLRGIVEGQSISDIFIPRLVELYRQGKFPFDKLIKF-YPFDEINRAAEDSEKGVTLKPVLRI 365 The following BLAST results are available for this feature:
BLAST of CX290808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 115
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290808 ID=CX290808; Name=CX290808; organism=Citrus clementina; type=EST; length=671bpback to top |