CX290808

Overview
NameCX290808
Unique NameCX290808
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHL_GADMO (Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.019e-43
Identity = 80/173 (46.24%), Postives = 118/173 (68.21%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIH 532
            G +GL+V  G +A GASRII +D NP+K   AK FG T+ +NP D+++PV+QV+  +TDGG DYSFEC+G+  ++  AL++C  GWG +V +GV     E++      ++GRT KG+ FGG+K    +P LV  Y+ K+  VDEF+TH L FE I++ F+LM  GK +R+V++
Sbjct:  202 GALGLAVIMGCQAAGASRIIAIDVNPDKFRIAKEFGATDLVNPKDHSKPVEQVLVEMTDGGVDYSFECVGNIAVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRTWKGTAFGGYKSVESVPKLVEEYMNKKVKVDEFVTHTLPFEKIHEGFDLMGAGKSIRTVLN 374          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSJ (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. japonica GN=ADH2 PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 2.637e-43
Identity = 83/174 (47.70%), Postives = 121/174 (69.54%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+  +GA+  GASRIIGVD NP K E+AK FG T+F+NP D+++PV +V+  +T+GG D + EC G+   + +  +   DGWG+AV +GVP        H   FL+ +TLKG+ FG +KP+TDLP++V  Y+KKE  +++FITH++ F +IN AF+LM +G+ LR V+ M
Sbjct:  204 GAVGLAAMEGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDHSKPVHEVLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRM 377          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH2_ORYSI (Alcohol dehydrogenase 2 OS=Oryza sativa subsp. indica GN=ADH2 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 2.637e-43
Identity = 83/174 (47.70%), Postives = 121/174 (69.54%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+  +GA+  GASRIIGVD NP K E+AK FG T+F+NP D+++PV +V+  +T+GG D + EC G+   + +  +   DGWG+AV +GVP        H   FL+ +TLKG+ FG +KP+TDLP++V  Y+KKE  +++FITH++ F +IN AF+LM +G+ LR V+ M
Sbjct:  204 GAVGLAAMEGARLSGASRIIGVDLNPAKFEQAKKFGCTDFVNPKDHSKPVHEVLIEMTNGGLDRAVECTGNINAMISCFECVHDGWGVAVLVGVPTKDDVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPNVVELYMKKELELEKFITHSVPFSEINTAFDLMLKGESLRCVMRM 377          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 5.874e-43
Identity = 82/174 (47.13%), Postives = 118/174 (67.82%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+V  G K  GASRIIG+D N +K  KAK FG TE +NP D ++ +Q+V+  +TDGG D+SFECIG+  ++ +AL++   GWG++V +GV     E++      ++GRT KG+ FGGWK    +P LV+ Y+ K+  VDEF+T NL F+ IN+AF+LM  G  +R+V+ M
Sbjct:  201 GGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECINPQDFSKSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINKAFDLMHSGNSIRTVLKM 374          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 173.711 bits (439), Expect = 7.671e-43
Identity = 82/174 (47.13%), Postives = 118/174 (67.82%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+V  G K  GASRIIG+D N +K  KAK FG +E ++P D ++ +Q+V+  +TDGG DYSFECIG+  ++ +AL++   GWG++V +GV     E++      ++GRT KG+ FGGWK    +P LV+ Y+ K+  VDEF+T NL F+ INQAF+LM  G  +R+V+ M
Sbjct:  201 GGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGASECISPQDFSKSIQEVLVEMTDGGVDYSFECIGNVKVMRSALEAAHKGWGVSVVVGVAASGEEISTRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINQAFDLMHSGDSIRTVLKM 374          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.002e-42
Identity = 84/174 (48.28%), Postives = 119/174 (68.39%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+ A+GA+  GASRIIGVD + ++ E+AK FGVTEF+NP  + +PVQ+VI  +T+ G D S EC G T  + +A +   DGWG+AV +GVP        H   FL+ RTLKG+ FG +K +TD+PS+V +Y+ KE  +++FITH + F +IN+AF  M +G+ LR +I M
Sbjct:  205 GAVGLAAAEGARLSGASRIIGVDLHSDRFEEAKKFGVTEFVNPKAHEKPVQEVIAELTNRGVDRSIECTGSTEAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELELEKFITHKVPFSEINKAFEYMLKGEGLRCIIRM 378          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.232e-42
Identity = 80/176 (45.45%), Postives = 122/176 (69.32%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHMPK 541
            G VGL+VA G KA GA+RIIG+D N  K E  K FG+TEF+NP    + VQ+V+  +TD G D++FECIG+ G++  AL+SC  GWG +V +GV     E++      ++GR  KG+ FGG+K +  +P LV+ Y+ K+ ++DEF++H L F+ IN+AF+LM +G+ +R+V+ +P+
Sbjct:  203 GAVGLAVAMGCKAAGAARIIGIDINESKFEIGKKFGITEFVNPKKFCKSVQKVLGEMTDVGVDFTFECIGNVGVMRAALESCHKGWGTSVIVGVAAHGEEISTRPFQLVTGRVWKGTAFGGFKSRDSVPKLVDDYMNKKLLLDEFVSHKLSFKKINEAFDLMHKGESIRAVLDIPE 378          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADHL7_ARATH (Alcohol dehydrogenase-like 7 OS=Arabidopsis thaliana GN=At5g42250 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.807e-42
Identity = 85/176 (48.30%), Postives = 115/176 (65.34%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPND-NNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAH-YGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G++GL+VA+GA+  GASRIIGVD NP K +  + FGVTEF+N        V +VI  +TDGGADY FEC+G + ++  A   C  GWG  +TLGV K   ++    + +   G+ L GSLFGG K KT +P L+ RYL  E  +D+F+TH + FE+IN AF L+ EGKC+R V+ M
Sbjct:  214 GSIGLAVAEGARLCGASRIIGVDINPTKFQVGQKFGVTEFVNSMTCEKNRVSEVINEMTDGGADYCFECVGSSSLVQEAYACCRQGWGKTITLGVDKPGSQICLDSFDVLHHGKILMGSLFGGLKAKTHIPILLKRYLSNELELDKFVTHEMKFEEINDAFQLLLEGKCIRCVLWM 389          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.807e-42
Identity = 82/174 (47.13%), Postives = 119/174 (68.39%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSVIHM 535
            G VGL+ A+GA+  GASRIIGVD    + E AK FGV EF+NP ++++PVQQVI  +T+GG D + EC G    + +A +   DGWG+AV +GVP        H   FL+ RTLKG+ +G +KP+TDLP++V +Y+K E  +++FITH + F +IN+AF+ M +G+ +R +I M
Sbjct:  205 GAVGLAAAEGARISGASRIIGVDLVSSRFELAKKFGVNEFVNPKEHDKPVQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHTVPFSEINKAFDYMLKGESIRCIIKM 378          
BLAST of CX290808 vs. ExPASy Swiss-Prot
Match: ADH3_HORVU (Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 4.972e-42
Identity = 81/171 (47.37%), Postives = 116/171 (67.84%), Query Frame = 2
Query:   14 GTVGLSVAQGAKARGASRIIGVDTNPEKCEKAKAFGVTEFLNPNDNNEPVQQVIKRITDGGADYSFECIGDTGMITTALQSCCDGWGLAVTLGVPKLKPEVAAHYGLFLSGRTLKGSLFGGWKPKTDLPSLVNRYLKKEFMVDEFITHNLLFEDINQAFNLMKEGKCLRSV 526
            G VGL+  +GA+  GASRIIGVD NP K E+AK FG T+F+NP D+ +PVQ+V+  +T+GG D + EC G    +    +   DGWG+AV +GVP  +     H   FL+ +TLKG+ FG +KP+TDLP +V  Y++KE  +++FITH++ F  IN AF+LM +G+ LR +
Sbjct:  204 GAVGLAAMEGARMAGASRIIGVDLNPAKYEQAKKFGCTDFVNPKDHTKPVQEVLVEMTNGGVDRAVECTGHIDAMIATFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNEKTLKGTFFGNYKPRTDLPEVVEMYMRKELDLEKFITHSVPFSQINTAFDLMLKGEGLRCI 374          
The following BLAST results are available for this feature:
BLAST of CX290808 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 115
Match NameE-valueIdentityDescription
ADHL_GADMO2.019e-4346.24Alcohol dehydrogenase class-3 chain L OS=Gadus mor... [more]
ADH2_ORYSJ2.637e-4347.70Alcohol dehydrogenase 2 OS=Oryza sativa subsp. jap... [more]
ADH2_ORYSI2.637e-4347.70Alcohol dehydrogenase 2 OS=Oryza sativa subsp. ind... [more]
ADHX_RAT5.874e-4347.13Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_MOUSE7.671e-4347.13Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADH_MALDO1.002e-4248.28Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADHX_OCTVU2.232e-4245.45Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]
ADHL7_ARATH3.807e-4248.30Alcohol dehydrogenase-like 7 OS=Arabidopsis thalia... [more]
ADH1_PEA3.807e-4247.13Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]
ADH3_HORVU4.972e-4247.37Alcohol dehydrogenase 3 OS=Hordeum vulgare GN=ADH3... [more]

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Properties
Property NameValue
Genbank descriptionC02027D07SK IF1 Citrus clementina cDNA clone C02027D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290808 ID=CX290808; Name=CX290808; organism=Citrus clementina; type=EST; length=671bp
GGATTCGGCCGAGGGAACTGTAGGCCTTTCTGTTGCACAAGGTGCAAAAG
CCAGAGGAGCGTCTAGAATTATTGGCGTTGACACTAACCCTGAGAAATGT
GAAAAAGCCAAAGCTTTTGGAGTTACAGAGTTTCTCAACCCAAATGATAA
TAATGAACCTGTTCAACAGGTTATTAAGAGAATTACTGATGGAGGGGCAG
ATTACTCGTTTGAATGTATTGGTGATACAGGAATGATAACTACTGCTTTA
CAATCTTGCTGTGATGGATGGGGTCTTGCAGTGACTCTTGGTGTACCAAA
ACTGAAGCCCGAAGTAGCAGCACACTATGGACTGTTTCTAAGTGGAAGAA
CACTGAAAGGCTCTCTATTTGGTGGATGGAAACCTAAAACTGACCTTCCT
TCATTAGTAAACAGGTATCTTAAAAAGGAGTTCATGGTCGATGAGTTTAT
CACCCATAATCTCCTGTTCGAGGATATCAATCAAGCTTTTAATCTCATGA
AAGAAGGGAAATGTTTGCGCAGTGTAATTCATATGCCGAAATAGTTATGT
TTGGGTTATCGAAACCAAGAAATAGAGACCAAACAACACTGTGGTCAGAT
GGATGAATGCACAAGTGATAATGCACAGCATTTGTGGAGATCTATGAGAA
GTATGTAGCTCTGTTCTTTTT
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