CX290814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB2_ASPFU (ATP-dependent RNA helicase sub2 OS=Aspergillus fumigatus GN=sub2 PE=3 SV=1) HSP 1 Score: 333.954 bits (855), Expect = 5.059e-91 Identity = 169/246 (68.70%), Postives = 203/246 (82.52%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLD-------MRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 715 RELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P IVVGTPGR+ AL R+K LSL+NV+ F+LDECDKML+ + MRRDVQEIF+ TP DKQVMMFSATLS+EIRP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD+L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+ L+ Sbjct: 136 RELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKESYPNIVVGTPGRLNALVREKKLSLRNVKAFVLDECDKMLDQIGKQAQIAHMRRDVQEIFRATPADKQVMMFSATLSQEIRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSESEKNRKLNELLDSLEFNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDVFGRGIDIERINLA 381
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: UAP56_CAEEL (Spliceosome RNA helicase BAT1 homolog OS=Caenorhabditis elegans GN=hel-1 PE=2 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 1.472e-90 Identity = 165/236 (69.92%), Postives = 194/236 (82.20%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELA+QI E+ERFS YLP +KVAVF+GG+ IK ++ L N+CP IVVGTPGR+LALAR L L V++F+LDECDKM+ DMRRDVQEI KMTP KQVMMFSATL KE+R VCK+FMQDPME+YVDDEAKLTLHGL QHY+KL E EKNR+L +LLDAL+FNQVVIFVK+V R L++LL E NFPSI IH M+QEERL+RY+ FK+ KRILVATDL GRG+DIERV + Sbjct: 119 RELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAEKNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNI 354
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB2_CRYNE (ATP-dependent RNA helicase SUB2 OS=Cryptococcus neoformans GN=SUB2 PE=3 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 1.472e-90 Identity = 163/238 (68.49%), Postives = 192/238 (80.67%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELAYQI +EF RFS ++ +++ VFYGG I +++L N+ CP IVVGTPGR +AL RDK L+ V+HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSATLSK+IR CKKFMQ P+EIYVDDE KLTLHGL Q Y+KL E EKNRKLNDLLD L+FNQV IFVKSV RA +L+ LL ECNFPSICIHSG+ Q ER++R++ FK KRILVATD+ GRGID+ERV + Sbjct: 137 RELAYQIKNEFTRFSKFMTNVRTGVFYGGTPISADQEILANKEKCPHIVVGTPGRTMALVRDKKLNASKVKHFVLDECDKMLEQLDMRRDVQEIFRATPHHKQVMMFSATLSKDIRATCKKFMQSPLEIYVDDETKLTLHGLQQFYLKLEEREKNRKLNDLLDNLEFNQVCIFVKSVQRATQLDALLQECNFPSICIHSGLQQAERISRFQQFKAFEKRILVATDIFGRGIDVERVNV 374
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB2_CHAGB (ATP-dependent RNA helicase SUB2 OS=Chaetomium globosum GN=SUB2 PE=3 SV=1) HSP 1 Score: 327.791 bits (839), Expect = 3.625e-89 Identity = 163/239 (68.20%), Postives = 194/239 (81.17%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 715 RELA+QI +E+ RFS Y+PDIK VFYGG I+ ++LKN+ P I+VGTPGR+ AL RDK L L NVR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATL+ EI+P+C+KFMQ+P E YVD++ KLTLHGL Q+YI L E EKNRKLN+LLD L FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+ L+ Sbjct: 128 RELAFQIRNEYNRFSKYMPDIKTGVFYGGTPIQKDAEVLKNKETHPHIIVGTPGRLNALVRDKHLRLGNVRMFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLADEIKPICRKFMQNPTEHYVDEDTKLTLHGLQQYYIPLEEREKNRKLNELLDELQFNQVIIFVKSTIRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIERINLA 366
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB2_MAGGR (ATP-dependent RNA helicase SUB2 OS=Magnaporthe grisea GN=SUB2 PE=3 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.350e-88 Identity = 162/239 (67.78%), Postives = 194/239 (81.17%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 715 RELA+QI +E+ RFS Y+PDIK VF+GG I+ +LLKN+ P I+VGTPGR+ AL RDK L L +VR F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS EI+P+CKKFMQ+P E YVD++ KLTLHGL Q+++ L E EKNRKLN+LLD L FNQV+IFVKS RA EL+KLL ECNFPSI +HSG+SQEER+ RYK FKE NKRI VATD+ GRGIDIER+ L+ Sbjct: 130 RELAFQIRNEYNRFSKYMPDIKTGVFFGGTPIQKDAELLKNKETHPHIIVGTPGRLNALVRDKFLRLSSVRIFVLDECDKMLDQIDMRRDVQEIFRATPQQKQVMMFSATLSDEIKPICKKFMQNPTEHYVDEDTKLTLHGLQQYFVALEEKEKNRKLNELLDDLQFNQVIIFVKSTLRATELDKLLRECNFPSIAVHSGVSQEERIRRYKEFKEFNKRICVATDVFGRGIDIERINLA 368
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB2_SCLS1 (ATP-dependent RNA helicase sub2 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=sub2 PE=3 SV=1) HSP 1 Score: 322.013 bits (824), Expect = 1.989e-87 Identity = 156/239 (65.27%), Postives = 196/239 (82.01%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 715 RELAYQI +E++RF ++PD+K+ VFYGGV I ++LKN P I+VGTPGR+ AL RDK L L +V+ F+LDECDKML+ +DMRRDVQEIF+ TP KQVMMFSATLS+E+RP+CKKFMQ+P+EIY+D+E KLTL+GL Q+YIKL E EKNR+LN+LLD L FNQV+IFVKS RA EL+KLL ECNFPS+ IHSG+SQEER+ R+ FK+ NKRI VATD+ GRGID+ ++ L+ Sbjct: 137 RELAYQIRNEYQRFCHFMPDVKIGVFYGGVPISKDVEVLKNPETHPHIIVGTPGRLNALVRDKYLRLNSVKVFVLDECDKMLDQIDMRRDVQEIFRATPPQKQVMMFSATLSQEVRPICKKFMQNPLEIYIDNETKLTLYGLQQYYIKLEEREKNRRLNELLDELSFNQVIIFVKSTVRATELDKLLRECNFPSVAIHSGVSQEERIKRFNDFKDFNKRICVATDVFGRGIDVNKINLA 375
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB2_CANGA (ATP-dependent RNA helicase SUB2 OS=Candida glabrata GN=SUB2 PE=3 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 1.289e-86 Identity = 158/239 (66.11%), Postives = 193/239 (80.75%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 715 RELAYQI +E+ RFS Y+PD++ AVFYGG I +LLKN+ P IVV TPGR+ AL RDK + L +V++F++DECDK+LE LDMRRDVQEIF+ TP DKQVMMFSATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YIKL E EKNRKL LLD L+FNQV+IFVKS SRA EL KLL NFP+I +H M QEER+ RYK FK+ KRI V+TD+ GRGIDIER+ L+ Sbjct: 133 RELAYQIRNEYLRFSKYMPDVRTAVFYGGTPIAKDAELLKNKDTAPHIVVATPGRLKALVRDKMIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDDLEFNQVIIFVKSTSRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLA 371
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB2_PHANO (ATP-dependent RNA helicase SUB2 OS=Phaeosphaeria nodorum GN=SUB2 PE=3 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.684e-86 Identity = 158/239 (66.11%), Postives = 189/239 (79.08%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNEC--PQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 715 RELAYQI +E+ RF+ +LPD+KV VFYGG + +LL N+ P I+VGTPGRI AL RD+ L L N++HF+LDECDKML+ DMR DVQ IF+ TP KQVMMFSATLSKEIR VCKKFMQ+P+EIYVDDE KLTLHGL Q Y+KL E EKNRKLNDLLD L+FNQV+IFV+S R EL+KLL ECNFPS +HSG+ QEER+ RYK FKE RI V+TD+ GRGID+ER+ ++ Sbjct: 132 RELAYQIRNEYNRFAKFLPDVKVGVFYGGTPVAKDIELLSNKDTHPHIIVGTPGRINALVRDRHLRLANLKHFVLDECDKMLDQPDMRNDVQAIFRATPAHKQVMMFSATLSKEIRAVCKKFMQNPLEIYVDDEKKLTLHGLQQFYVKLDEREKNRKLNDLLDNLEFNQVIIFVRSTLRCTELDKLLRECNFPSTAVHSGIGQEERIKRYKEFKEFQTRICVSTDIFGRGIDVERINVA 370
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB22_VANPO (ATP-dependent RNA helicase SUB2-2 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=SUB2-2 PE=3 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.684e-86 Identity = 158/239 (66.11%), Postives = 192/239 (80.33%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 715 RELAYQI +E+ RFS Y+PD+K AVFYGG I +LLKN+ P IVV TPGR+ AL RDK + L +V++F++DECDK+LE LDMRRDVQ+IF+ TP DKQVMMFSATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YIKL E EKNRKL LLD L+FNQV+IFVKS RA EL KLL E NFP+I +H M Q ER+ RYK FKE KRI V+TD+ GRGIDIER+ L+ Sbjct: 136 RELAYQIRNEYLRFSKYMPDVKTAVFYGGTPITKDAELLKNKETAPHIVVATPGRLKALVRDKLIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMMFSATLSEEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLQENEKNRKLAQLLDDLEFNQVIIFVKSTKRANELTKLLNESNFPAITVHGNMKQAERIARYKAFKEFEKRICVSTDVFGRGIDIERINLA 374
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB2_YEAST (ATP-dependent RNA helicase SUB2 OS=Saccharomyces cerevisiae GN=SUB2 PE=1 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.873e-86 Identity = 157/239 (65.69%), Postives = 193/239 (80.75%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 715 RELAYQI +E+ RFS Y+PD+K AVFYGG I +LLKN+ P IVV TPGR+ AL R+K + L +V++F++DECDK+LE LDMRRDVQEIF+ TP DKQVMMFSATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YIKL E EKNRKL LLD L+FNQV+IFVKS +RA EL KLL NFP+I +H M QEER+ RYK FK+ KRI V+TD+ GRGIDIER+ L+ Sbjct: 140 RELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLA 378 The following BLAST results are available for this feature:
BLAST of CX290814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290814 ID=CX290814; Name=CX290814; organism=Citrus clementina; type=EST; length=721bpback to top |