CX290814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB2_YEAS7 (ATP-dependent RNA helicase SUB2 OS=Saccharomyces cerevisiae (strain YJM789) GN=SUB2 PE=3 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 2.873e-86 Identity = 157/239 (65.69%), Postives = 193/239 (80.75%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 715 RELAYQI +E+ RFS Y+PD+K AVFYGG I +LLKN+ P IVV TPGR+ AL R+K + L +V++F++DECDK+LE LDMRRDVQEIF+ TP DKQVMMFSATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YIKL E EKNRKL LLD L+FNQV+IFVKS +RA EL KLL NFP+I +H M QEER+ RYK FK+ KRI V+TD+ GRGIDIER+ L+ Sbjct: 140 RELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLA 378
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB2_KLULA (ATP-dependent RNA helicase SUB2 OS=Kluyveromyces lactis GN=SUB2 PE=3 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 4.900e-86 Identity = 157/239 (65.69%), Postives = 191/239 (79.92%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLL--KNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 715 RELAYQI +E+ RFS Y+PD+K AVFYGG K DLL K P I+V TPGR+ AL RDK + L +V++F++DECDK+LE LDMRRDVQ+IF+ TP DKQVMMFSATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YIKL+E EKNRKL LLD L+FNQV+IFVKS RA EL KLL NFP+I +H M QEER+ RYK FKE KRI V+TD+ GRGIDIER+ L+ Sbjct: 131 RELAYQIRNEYLRFSKYMPDVKTAVFYGGTEYKNDIDLLSKKETVPHIIVATPGRLKALVRDKHIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLNEKEKNRKLAQLLDDLEFNQVIIFVKSTVRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKEFEKRICVSTDVFGRGIDIERINLA 369
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB21_VANPO (ATP-dependent RNA helicase SUB2-1 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=SUB2-1 PE=3 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 8.358e-86 Identity = 157/239 (65.69%), Postives = 191/239 (79.92%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 715 RELAYQI +E+ RFS Y+PD+K AVFYGG I +LLKN+ P IVV TPGR+ AL RDK + L +V++F++DECDK+LE LDMRRDVQ+IF+ TP DKQVMMFSATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+Y KL E EKNRKL LLD L+FNQV+IFVKS RA EL KLL E NFP+I +H M Q ER+ RYK FKE KRI V+TD+ GRGIDIER+ L+ Sbjct: 135 RELAYQIRNEYLRFSKYMPDVKTAVFYGGTPINKDAELLKNKETAPHIVVATPGRLKALVRDKLIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMMFSATLSEEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYTKLQENEKNRKLAQLLDDLEFNQVIIFVKSTKRANELTKLLNESNFPAITVHGHMKQAERIARYKAFKEFEKRICVSTDVFGRGIDIERINLA 373
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB2_EMENI (ATP-dependent RNA helicase sub2 OS=Emericella nidulans GN=sub2 PE=3 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 1.092e-85 Identity = 164/256 (64.06%), Postives = 197/256 (76.95%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLES-----------------LDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 715 RELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P I+VGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ LDMRRDVQEIF+ TP DKQVMMFSATLS+++RP+CKKFM++P+E+YVDD+ KLTLHGL Q+YIKLSE EKNRKLN+LLD+L+FNQV+IFVKS RA EL+KLL ECNFPSI +HSG RYK FKE NKRI VATD+ GRGIDIER+ L+ Sbjct: 137 RELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKDTFPNIIVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIGRSFNPNSQSRSPLTPLDMRRDVQEIFRATPTDKQVMMFSATLSQDVRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDSLEFNQVIIFVKSTIRANELDKLLRECNFPSIAVHSG--------RYKEFKEFNKRICVATDVFGRGIDIERINLA 384
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB2_ASHGO (ATP-dependent RNA helicase SUB2 OS=Ashbya gossypii GN=SUB2 PE=3 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 1.426e-85 Identity = 155/239 (64.85%), Postives = 193/239 (80.75%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 715 RELAYQI +E+ RFS Y+PD+K AVFYGG + + +LLKN+ P IVV TPGR+ AL RD ++ L +V++F++DECDK+LE LDMRRDVQ+IF+ TP DKQVMMFSATLS+EIRP+C++F+Q+P+EI+VDDEAKLTLHGL Q+YI+L E EKNRKL LLD L+FNQV+IFVKS RA EL KLL NFP+I +H M QEER+ RYK FKE KRI V+TD+ GRGIDIER+ L+ Sbjct: 132 RELAYQIRNEYLRFSKYMPDVKTAVFYGGTDTRKDIELLKNKDTAPHIVVATPGRLKALVRDNNIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIRLEEREKNRKLAQLLDDLEFNQVIIFVKSTLRANELTKLLNASNFPAITVHGHMRQEERIARYKAFKEFEKRICVSTDVFGRGIDIERINLA 370
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: SUB2_YARLI (ATP-dependent RNA helicase SUB2 OS=Yarrowia lipolytica GN=SUB2 PE=3 SV=2) HSP 1 Score: 303.908 bits (777), Expect = 5.606e-82 Identity = 150/239 (62.76%), Postives = 187/239 (78.24%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTLS 715 RELAYQI +E+ RFS YLPD+K AVFYGG I+ +L++N+ P ++V TPGR+ AL RDK L L NV+ F++DECDK+L+ +DMRRDVQEIF++TP KQVMMFSATLS+EIRP+CKKFM P+EI VDDE KLTLHGL Q+Y+ + E KNRKL DLLD L+FNQV+IFVKS SRA L+++L FP +HSG+ QEER+ RYK FKE KRI V+TD+ GRGIDIER+ L+ Sbjct: 135 RELAYQIMNEYARFSKYLPDVKTAVFYGGSPIQKDIELIQNKETSPHVIVATPGRLHALVRDKHLRLGNVKTFVIDECDKVLDQIDMRRDVQEIFRVTPRQKQVMMFSATLSQEIRPICKKFMSSPLEILVDDEGKLTLHGLQQYYVDVEEKSKNRKLGDLLDNLEFNQVIIFVKSTSRANGLSQVLNANGFPCTAVHSGIPQEERIARYKEFKEFKKRICVSTDVFGRGIDIERINLA 373
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: IF4A_KLULA (ATP-dependent RNA helicase eIF4A OS=Kluyveromyces lactis GN=TIF1 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.767e-35 Identity = 90/237 (37.97%), Postives = 139/237 (58.65%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELA QI + ++ D+KV GG +++ + L+ QI+VGTPGR+ + + N++ FILDE D+ML S + + IF M P QV++ SAT+ ++ V KFM+DP+ I V + +LTL G+ Q+Y+ + E + K L DL D++ Q VIF + + EL + L E NF I+S + Q+ER T K F+ G+ RIL++TDL+ RGID+++V+L Sbjct: 100 RELALQIQKVVMALAIHM-DVKVHACIGGTSLQEDSEALRGGA-QIIVGTPGRVFDMIDRRIFKTDNIKMFILDEADEML-STGFKEQIYNIFTMLPPTSQVVLLSATMPGDVLEVTSKFMKDPVRILVKKD-ELTLEGIGQYYVNVEEEQYKYDCLTDLYDSISVTQAVIFCNTRRKVEELTERLRENNFTVSAIYSDLQQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSL 332
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: IF4A_ASHGO (ATP-dependent RNA helicase eIF4A OS=Ashbya gossypii GN=TIF1 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.770e-35 Identity = 92/237 (38.82%), Postives = 139/237 (58.65%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELA QI + ++ D+KV GG + + + L+ QIVVGTPGR+ + ++ +++ FILDE D+ML S + + +IF M P QV++ SAT+ KE+ V KFM P+ I V +A LTL G+ Q+YI + SE K L+DL D++ Q VIF + + EL K L + +F I+S + Q +R T K F+ G+ RIL++TDL+ RGID+++V+L Sbjct: 100 RELALQIQKVVMALALHM-DVKVHACIGGTDPREDAEALRAGA-QIVVGTPGRVFDMIERRNFKTDHIKMFILDEADEMLSS-GFKEQIYKIFTMLPPTTQVVLLSATMPKEVLDVTDKFMNKPVRILVKKDA-LTLEGIQQYYINVESEEYKYDCLSDLYDSISVTQAVIFCNTRRKVEELTKRLTDDSFTVSAIYSDLPQAQRDTIMKEFRTGSSRILISTDLLARGIDVQQVSL 332
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: IF4A_CANGA (ATP-dependent RNA helicase eIF4A OS=Candida glabrata GN=TIF1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.552e-34 Identity = 91/237 (38.40%), Postives = 138/237 (58.23%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELA QI ++ DIKV GG + + L++ QIVVGTPGR+ + + + N++ FILDE D+ML S + + +IF M P QV++ SAT+ +++ V KFMQ+P+ I V + +LTL G+ Q Y+ + E + K L DL D++ Q VIF + + EL + L NF I+S + Q+ER T K F+ G+ RIL++TDL+ RGID+++V+L Sbjct: 101 RELALQIQKVVMALGFHM-DIKVHACIGGTSFVEDAEGLRDA--QIVVGTPGRVFDNIQRRKFKVDNIKMFILDEADEML-STGFKEQIYQIFTMLPPTTQVVLLSATMPRDVLEVTAKFMQNPVRILVKKD-ELTLEGIKQFYVNVEEEQFKYDCLTDLYDSISVTQAVIFCNTRRKVEELTQRLTADNFTVSSIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSL 332
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: IF4A_VANPO (ATP-dependent RNA helicase eIF4A OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=TIF1 PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 7.425e-34 Identity = 93/237 (39.24%), Postives = 137/237 (57.81%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELA QI + ++ D+KV GG + + LK+ QIVVGTPGR+ + N++ FILDE D+ML S R + +IF M P QV++ SATL ++ V KFM++P+ I V + +LTL G+ Q YI + E + K L+DL D++ Q VIF + + EL + L E NF I+S + Q+ER K F+ G+ RIL++TDL+ RGID+++V+L Sbjct: 101 RELALQIQKVVIALAFHM-DVKVHACIGGTSFVEDTEGLKDA--QIVVGTPGRVSDNIQRHRFKTDNIKMFILDEADEMLSS-GFREQIYQIFTMLPPTTQVVLLSATLPGDVLEVTTKFMRNPIRILVKKD-ELTLEGIKQFYINVEEEQYKFDCLSDLYDSISVTQAVIFCNTRRKVEELTQKLTESNFTVSSIYSDLPQQERDVIMKEFRSGSSRILISTDLLARGIDVQQVSL 332 The following BLAST results are available for this feature:
BLAST of CX290814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290814 ID=CX290814; Name=CX290814; organism=Citrus clementina; type=EST; length=721bpback to top |