CX290814
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: RRP3_BOTFB (ATP-dependent rRNA helicase rrp3 OS=Botryotinia fuckeliana (strain B05.10) GN=rrp3 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.504e-31 Identity = 76/235 (32.34%), Postives = 136/235 (57.87%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILA-LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERV 706 RELAYQI +FE + + +K AV GG+++ + + + + P I+V TPGR+L L K SL+++++ ++DE D++L+ LD + +I K+ P +++ +FSAT+S ++ + + ++DP+ + + T+ L+Q+YI + + K+ L LL+ +IF ++V+ + LL F +I +H +SQ RL F+ G++ ILVATD+ RG+DI V Sbjct: 138 RELAYQISQQFEALGSVIR-VKCAVIVGGMDM-VPQSIALGKKPHIIVATPGRLLDHLENTKGFSLRSLKYLVMDEADRLLD-LDFGPILDKILKVLPRERRTYLFSATISSKVESLQRASLKDPLRVSISSNKYQTVSTLIQNYIFIPLIHKDTYLIYLLNEFAGQSAIIFTRTVNETQRIAILLRTLGFGAIPLHGQLSQSSRLGALNKFRAGSREILVATDVAARGLDIPSV 369
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: IF4A_AJECN (ATP-dependent RNA helicase eIF4A OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=TIF1 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.504e-31 Identity = 83/237 (35.02%), Postives = 136/237 (57.38%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELA QI ++ I+ GG++++ L++ PQ+VVGTPGR+ + + + L +++ F+LDE D+ML S + +IF+ P QV++ SAT+ +++ V KFM+DP+ I V +A+LTL G+ Q YI + + E K L+DL + + Q VIF + + L L +F +H M Q++R K F+ G+ R+L+ATDL+ RGID+++V+L Sbjct: 103 RELAQQIQKVVVAIGDFM-SIECHACIGGISVREDMKALQDG-PQVVVGTPGRVHDMIQRRVLKTDHMKMFVLDEADEML-SHGFTEQIYDIFQFLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVK-KAELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQQQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSL 335
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: IF4A_EMENI (ATP-dependent RNA helicase eIF4A OS=Emericella nidulans GN=tif1 PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.683e-31 Identity = 86/237 (36.29%), Postives = 134/237 (56.54%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELA QI ++ +I+ GG ++ + L+ E PQIVVGTPGRI + + + L ++ FILDE D+ML S + +IF++ P QV++ SAT+ +++ V KFM+DP+ I V + +LTL G+ Q YI + + E K L+DL + + Q VIF + + L L +F +H M Q +R K F+ G+ R+L+ATDL+ RGID+++V+L Sbjct: 126 RELAQQIQKVVIAIGDFM-NIQCHACIGGTAVRDDMNALR-EGPQIVVGTPGRIHDMIQRRVLKTDQMKMFILDEADEML-SRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQ-ELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSL 358
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: IF4A_CAEEL (Eukaryotic initiation factor 4A OS=Caenorhabditis elegans GN=inf-1 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.003e-30 Identity = 81/237 (34.18%), Postives = 132/237 (55.70%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELA QI YL ++ + GG +++ + L+ +VVGTPGR+ + L ++ F+LDE D+ML S + + E+F+ P D QV++ SAT+ E+ V +FM++P+ I V + +LTL G+ Q YI + + E K L DL + ++ Q VIF + + L + + E F C+H M Q ER T + F+ G+ R+L+ TD++ RGID+++V+L Sbjct: 107 RELAQQIQKVMSALGEYL-NVNILPCIGGTSVRDDQRKLEAGI-HVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEML-SRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKD-ELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSL 339
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: DEAD_KLEPN (Cold-shock DEAD box protein A OS=Klebsiella pneumoniae GN=deaD PE=3 SV=3) HSP 1 Score: 133.65 bits (335), Expect = 1.003e-30 Identity = 78/236 (33.05%), Postives = 124/236 (52.54%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELA Q+ FS ++ + V YGG + L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + KN L L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+ RG+D+ER++L Sbjct: 84 RELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTAYGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQALERLKDGRLDILIATDVAARGLDVERISL 316
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30 Identity = 83/237 (35.02%), Postives = 133/237 (56.12%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELE-KNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELA QI ++ ++ GG N++ L++ PQ+VVGTPGR+ + + + L ++ FILDE D+ML S + +IF++ P QV++ SAT+ +++ V KFM+DP+ I V + +LTL G+ Q YI + + E K L+DL + + Q VIF + + L L +F +H M Q +R K F+ G+ R+L+ATDL+ RGID+++V+L Sbjct: 103 RELAQQIQKVVVAIGDFM-SLECHACIGGTNVREDMKALQDG-PQVVVGTPGRVQDMIQRRVLRTDQMKLFILDEADEML-SRGFTEQIYDIFQLLPQSTQVVLLSATMPQDVLEVTTKFMRDPVRILVKKQ-ELTLEGIKQFYIAVEKEEWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQSQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSL 335
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: DEAD_SHIFL (Cold-shock DEAD box protein A OS=Shigella flexneri GN=deaD PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30 Identity = 78/236 (33.05%), Postives = 125/236 (52.97%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELA Q+ FS ++ + V YGG + L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+ RG+D+ER++L Sbjct: 84 RELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISL 316
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: DEAD_ECOLI (Cold-shock DEAD box protein A OS=Escherichia coli (strain K12) GN=deaD PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30 Identity = 78/236 (33.05%), Postives = 125/236 (52.97%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELA Q+ FS ++ + V YGG + L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+ RG+D+ER++L Sbjct: 84 RELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISL 316
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: DEAD_ECOL6 (Cold-shock DEAD box protein A OS=Escherichia coli O6 GN=deaD PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30 Identity = 78/236 (33.05%), Postives = 125/236 (52.97%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELA Q+ FS ++ + V YGG + L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+ RG+D+ER++L Sbjct: 84 RELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISL 316
BLAST of CX290814 vs. ExPASy Swiss-Prot
Match: DEAD_ECO57 (Cold-shock DEAD box protein A OS=Escherichia coli O157:H7 GN=deaD PE=3 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 1.311e-30 Identity = 78/236 (33.05%), Postives = 125/236 (52.97%), Query Frame = 2 Query: 5 RELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGNKRILVATDLVGRGIDIERVTL 712 RELA Q+ FS ++ + V YGG + L+ + PQIVVGTPGR+L + L L + +LDE D+ML + DV+ I P Q +FSAT+ + IR + ++FM++P E+ + T + Q Y + + KN L L+A DF+ +IFV++ + E+ + L + S ++ M+Q R + K+G IL+ATD+ RG+D+ER++L Sbjct: 84 RELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALR-QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR-MGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVT-TRPDISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISL 316 The following BLAST results are available for this feature:
BLAST of CX290814 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290814 ID=CX290814; Name=CX290814; organism=Citrus clementina; type=EST; length=721bpback to top |