CX290836

Overview
NameCX290836
Unique NameCX290836
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length603
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.825e-19
Identity = 45/128 (35.16%), Postives = 80/128 (62.50%), Query Frame = 3
Query:  210 IDHILDAQTKGE-----INEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAW 578
            +D +L  Q + E     +++  +  ++ ++ +A  +TT+ ++EW ++EL+ +P   K L+ E+  V G   +I E D  K+PYL+AV+KE+LRL   +PLLVP  +  D K+ GYDV + +++L+N W
Sbjct:  279 VDLLLQFQRENERSSSPVDDLTIKAVILDMFLAGTDTTVTALEWALSELIKNPRAMKILQKEVRGVAGSKGEIEESDLEKMPYLKAVMKESLRLHAPVPLLVPRESTRDTKVLGYDVASGTRVLINCW 406          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.302e-19
Identity = 57/189 (30.16%), Postives = 99/189 (52.38%), Query Frame = 3
Query:   39 YNYGDFIPILRPF-LRGYLKICKEVKERRLQLFKDYFVEERKKL-ASTKSMSNESLKCAIDHILDAQTKG-EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANIP 596
            +N GDFIP L    ++G     K++  R      D   E + K+    K + +  +    D   DA   G ++ +  +  ++ N+ VA  +T+  ++EW IAEL+ +P+I  + + E+D V+G    + E D  +L YL+A++KET RL  + PL +P +     ++ GY +P  S +L+N W +A  P
Sbjct:  220 FNIGDFIPQLNWLDIQGVAAKMKKLHARFDAFLTDILEEHKGKIFGEMKDLLSTLISLKND---DADNDGGKLTDTEIKALLLNLFVAGTDTSSSTVEWAIAELIRNPKILAQAQQEIDKVVGRDRLVGELDLAQLTYLEAIVKETFRLHPSTPLSLPRIASESCEINGYFIPKGSTLLLNVWAIARDP 405          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: C83B1_ARATH (Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CYP83B1 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.302e-19
Identity = 45/112 (40.18%), Postives = 71/112 (63.39%), Query Frame = 3
Query:  243 EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAW 578
            +   +NV  ++ +I V   +T    + W +  L+ +PE  KK ++E+ +V+G    ++E D   LPYL+AVIKE+LRL   IP+L+    + DAK+GGYD+PA++ I VNAW
Sbjct:  283 KFTHENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRSVIGDKGYVSEEDIPNLPYLKAVIKESLRLEPVIPILLHRETIADAKIGGYDIPAKTIIQVNAW 394          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 6.302e-19
Identity = 52/169 (30.77%), Postives = 90/169 (53.25%), Query Frame = 3
Query:   78 LRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ--ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAW 578
            L  Y+K C E ++  +Q   +  ++ ++    T+SM    +   +    +     E   DNV  ++ +I VA  +T   ++ WG+  L+ +P++ KK + E+   +       +TE D   LPY +A++KETLR+   IPLL+P   + D K+ GYD+PA + + VNAW
Sbjct:  233 LTAYMKECFERQDTYIQEVVNETLDPKRVKPETESM----IDLLMGIYKEQPFASEFTVDNVKAVILDIVVAGTDTAAAAVVWGMTYLMKYPQVLKKAQAEVREYMKEKGSTFVTEDDVKNLPYFRALVKETLRIEPVIPLLIPRACIQDTKIAGYDIPAGTTVNVNAW 397          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: CP1A1_FELCA (Cytochrome P450 1A1 OS=Felis catus GN=CYP1A1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.075e-18
Identity = 53/179 (29.61%), Postives = 89/179 (49.72%), Query Frame = 3
Query:   51 DFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKL---ASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAW 578
            DF PILR      L   K+V E+   +F    V+E  K       + +++  ++   D  LD     +++++ ++ +V ++  A  +T   +I W +  LV  P +Q+K++ ELDTV+G   Q    D  +LPY++A I E  R    +P  +PH    D  L G+ +P E  + VN W
Sbjct:  240 DFFPILRYLPNPALDFFKDVNEK-FSIFIHKMVKEHYKTFEKGHIRDITDSLIEHCQDKRLDENANIQLSDEKIVNVVSDLFGAGFDTVTTAISWCLMYLVTSPNVQEKIQKELDTVIGRERQPRLSDRLQLPYMEAFILEMFRHTSFVPFTIPHSTTKDTSLSGFYIPKERCVFVNQW 417          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.075e-18
Identity = 54/141 (38.30%), Postives = 79/141 (56.03%), Query Frame = 3
Query:  177 KSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQ-ITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAWWLANIP 596
            K   ++SL+  IDHI     KG         ++ NI +A I+T   ++ W + EL  +PEI KK++ E+   LG   + IT+ D  K+P+L  VIKET RL    PLL+P   +   K+ GYD+P + +ILVNAW +   P
Sbjct:  280 KQGKDDSLRLTIDHI-----KG---------LLTNIIIAGIDTGALTMIWTMTELARNPEIMKKVQGEIRDRLGNNRERITKEDLDKVPFLNLVIKETFRLHPVAPLLLPRETMAHVKVQGYDIPPKRRILVNAWAIGRDP 406          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: CP21A_BOVIN (Steroid 21-hydroxylase OS=Bos taurus GN=CYP21 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.834e-18
Identity = 63/185 (34.05%), Postives = 95/185 (51.35%), Query Frame = 3
Query:   51 DFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLASTK-SMSNESLKCAIDHILDA-------QTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPG---HQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVN 572
            D +P LR F    L   K+  E R     D+ VE  K+L   K SM     +   D++L         +  G++ E +V   V ++ +   ETT  ++ W +A L++HPEIQ++L+ ELD  LGPG    ++T  D  +LP L A I E LRLR  +PL +PH     + + GYD+P    ++ N
Sbjct:  209 DMVPFLRFFPNPGLWRLKQAIENR-----DHMVE--KQLTRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPN 386          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: CP1A1_MESAU (Cytochrome P450 1A1 OS=Mesocricetus auratus GN=CYP1A1 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 1.834e-18
Identity = 51/178 (28.65%), Postives = 88/178 (49.44%), Query Frame = 3
Query:   51 DFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLAS--TKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAW 578
            DFIPILR      L   K++ ++     +    E  +       + +++  ++   D  LD     ++++D V+ I+ ++  A  +T   +I W +  LV +P +Q+K++ ELDTV+G   +    D  +LPYL+A I ET R    +P  +PH    D  L G+ +P    + VN W
Sbjct:  239 DFIPILRYLPNSSLDAFKDLNKKFYSFMQKSVKEHYRTFEKGHIRDITDSLIEHCQDKSLDENANVQLSDDRVINIIVDLFGAGFDTVTTAISWSLMYLVTNPGVQRKIQEELDTVIGRSRRPRLCDRSQLPYLEAFILETFRHSSFLPFTIPHSTTRDTSLCGFYIPKGHCVFVNQW 416          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: CP1A1_HUMAN (Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.834e-18
Identity = 51/181 (28.18%), Postives = 88/181 (48.62%), Query Frame = 3
Query:   42 NYGDFIPILRPFLRGYLKICKEVKERRLQLFKDYFVEERKKLAS--TKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGPGHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAW 578
            N  DFIPILR      L   K++ E+     +    E  K       + +++  ++   +  LD     +++++ ++ IV ++  A  +T   +I W +  LV +P +Q+K++ ELDTV+G   +    D   LPY++A I ET R    +P  +PH    D  L G+ +P    + VN W
Sbjct:  232 NPADFIPILRYLPNPSLNAFKDLNEKFYSFMQKMVKEHYKTFEKGHIRDITDSLIEHCQEKQLDENANVQLSDEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQW 412          
BLAST of CX290836 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.834e-18
Identity = 51/184 (27.72%), Postives = 103/184 (55.98%), Query Frame = 3
Query:   36 EYNYGDFIPILRPF--LRGYLKICKEVKERRLQLFKDYFVEERKKLASTKSMSNESLKCAIDHILDAQTKGEINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGP-GHQITEPDTHKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGYDVPAESKILVNAW 578
            E+  G+++PIL     +RG+    KEV  R      D  V+E  + ++ K+   + +   +    D  +  ++  +++ +++ ++ +    TT   +EW + EL+  P+  KKL++E+ + + P G  I E +   + YL+AVIKE LRL  ++P+++P +   D K+ GY++ A +++++NAW
Sbjct:  215 EFPIGEYVPILAWIDGIRGFNNKIKEVS-RGFSDLMDKVVQEHLEASNDKA---DFVDILLSIEKDKNSGFQVQRNDIKFMILDMFIGGTSTTSTLLEWTMTELIRSPKSMKKLQDEIRSTIRPHGSYIKEKEVENMKYLKAVIKEVLRLHPSLPMILPRLLSEDVKVKGYNIAAGTEVIINAW 394          
The following BLAST results are available for this feature:
BLAST of CX290836 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 276
Match NameE-valueIdentityDescription
C71A6_NEPRA4.825e-1935.16Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
F3PH_PETHY6.302e-1930.16Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C83B1_ARATH6.302e-1940.18Cytochrome P450 83B1 OS=Arabidopsis thaliana GN=CY... [more]
C83A1_ARATH6.302e-1930.77Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]
CP1A1_FELCA1.075e-1829.61Cytochrome P450 1A1 OS=Felis catus GN=CYP1A1 PE=2 ... [more]
C71BH_ARATH1.075e-1838.30Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
CP21A_BOVIN1.834e-1834.05Steroid 21-hydroxylase OS=Bos taurus GN=CYP21 PE=1... [more]
CP1A1_MESAU1.834e-1828.65Cytochrome P450 1A1 OS=Mesocricetus auratus GN=CYP... [more]
CP1A1_HUMAN1.834e-1828.18Cytochrome P450 1A1 OS=Homo sapiens GN=CYP1A1 PE=1... [more]
C71AD_ARATH1.834e-1827.72Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionC02027F12SK IF1 Citrus clementina cDNA clone C02027F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290836 ID=CX290836; Name=CX290836; organism=Citrus clementina; type=EST; length=603bp
CGAGGGGTGAGAGGAGTCGGTTGGCCCAGAGCTTTGAGTACAATTACGGT
GATTTTATTCCCATTTTGAGACCTTTCTTGAGAGGCTACTTGAAGATTTG
TAAGGAAGTTAAAGAAAGGAGACTCCAGCTCTTCAAGGACTACTTTGTTG
AGGAGAGAAAGAAATTGGCAAGCACGAAGAGCATGAGTAATGAAAGCTTG
AAATGCGCAATCGATCATATTTTGGACGCTCAGACAAAGGGAGAAATCAA
CGAGGACAACGTTCTATACATCGTTGAGAACATCAATGTTGCCGCGATCG
AGACAACTCTTTGGTCGATCGAGTGGGGAATTGCAGAGCTAGTGAATCAT
CCTGAAATCCAGAAGAAGCTCCGCAATGAACTTGACACCGTGCTTGGTCC
TGGTCATCAAATCACTGAGCCTGACACCCACAAACTACCCTACCTTCAGG
CCGTGATCAAGGAAACTCTTCGCCTTAGGATGGCAATTCCTCTTCTTGTG
CCGCACATGAACCTTCACGACGCCAAGCTTGGAGGCTACGACGTCCCTGC
TGAGAGCAAAATCCTAGTGAACGCGTGGTGGCTCGCCAACATCCCGCCCA
ATG
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