CX290839

Overview
NameCX290839
Unique NameCX290839
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length733
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290839 vs. ExPASy Swiss-Prot
Match: TDXH_ARCFU (Probable peroxiredoxin OS=Archaeoglobus fulgidus GN=AF_0270 PE=3 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.234e-25
Identity = 63/174 (36.21%), Postives = 103/174 (59.20%), Query Frame = 1
Query:  187 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGI-ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGW 705
            PL+G+  P+        +    +KL +    K+ +LF +P DFT VC TE  AF +RY EF KLN E++G+S D VFSH+ W++  ++   + ++++P+IAD T  +++  G++ P +G   +R +FI+D E VI+        +GR++DE LR ++ALQ   +N     PA W
Sbjct:    3 PLLGDNFPEIEVVTTHGR----MKLPEAFKGKWFVLFSHPADFTPVCTTEFVAFQNRYDEFRKLNCELIGLSIDQVFSHIKWIEWIKEKLDI-EIEFPVIADDTGRVAEMLGLIHPAKGTNTVRAVFIVDPEAVIRAVIYYPQELGRNMDEILRAVKALQVSDQN-GVAMPANW 170          
BLAST of CX290839 vs. ExPASy Swiss-Prot
Match: TDXH_STAMF (Probable peroxiredoxin OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=Smar_0058 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.918e-25
Identity = 62/174 (35.63%), Postives = 101/174 (58.05%), Query Frame = 1
Query:  187 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVL-IPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGW 705
            PL+G   P+        +    +KL DY   KY +LF +P DFT VC TE  AF+ RY +F+KLNTE++G+S DS FSH+ W++  ++  G+ ++ +P++AD   +++   G+L        +R +F+ID  G+I+      L  GR++DE LR ++A+Q + +      PA W
Sbjct:    6 PLIGEKFPEMEVVTQHGK----IKLPDYFKGKYWVLFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELIGLSVDSNFSHIKWIEWIKEKLGV-EIPFPIMADPRGTVASKLGMLHAASSTHTVRAVFVIDPNGIIRAIIYYPLDNGRNIDEILRLVKAIQ-ITDKYGRATPANW 173          
BLAST of CX290839 vs. ExPASy Swiss-Prot
Match: TDXH_METJA (Probable peroxiredoxin OS=Methanocaldococcus jannaschii GN=MJ0736 PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.918e-25
Identity = 63/180 (35.00%), Postives = 104/180 (57.78%), Query Frame = 1
Query:  187 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKK--YVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQG-IALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGD 717
            P++G   P+   +         +KL DY  +K  + +LF +P DFT VC TE   F  RY EF KLNTE++G+S D VFSHL WV+  ++   + ++++P+IAD    +++  G++ P +G   +R +F++D +G+I+        +GR++DE +R ++ALQ V +      PA W   D
Sbjct:    2 PVIGEKFPEVEVKTTHGA----IKLPDYYVEKGKWFVLFSHPADFTPVCTTEFVGFQKRYDEFRKLNTELIGLSIDQVFSHLKWVEWIKEKLNV-EIEFPIIADDRGELAEKLGMISPYKGNNTVRAVFVVDNKGIIRAIIYYPQEVGRNLDEIVRLVKALQ-VSDEKGVAMPANWPEND 175          
BLAST of CX290839 vs. ExPASy Swiss-Prot
Match: TDXH_METMA (Probable peroxiredoxin OS=Methanosarcina mazei GN=MM_0814 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.448e-24
Identity = 73/186 (39.25%), Postives = 105/186 (56.45%), Query Frame = 1
Query:  187 PLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWV-----QTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGI--ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDE--VCPAGWKPGD 717
            PL+G+ AP F A  V  Q  I     DY GK +VILF +P DFT VC TE   F+    EF  +NTE++G+S DSVFSH+AW+     + + K     ++K+P+I D+   ++K YG++ P      A+R +FIID E  I+       + GR++ E  R + AL   Q+N  E    PA W+PG+
Sbjct:    2 PLIGDDAPSFTA--VTTQGIIKFP-DDYKGK-WVILFSHPADFTPVCTTEFMTFASMQEEFRSMNTELIGLSIDSVFSHIAWLKRIEEKIEYKGMKNLEIKFPVIEDLKMDVAKKYGMVQPKASTTQAVRAVFIIDPEAKIRTILYYPQSTGRNMQEIKRIVVAL---QKNAAEKVATPANWQPGE 180          
BLAST of CX290839 vs. ExPASy Swiss-Prot
Match: TDXH_SULSO (Probable peroxiredoxin OS=Sulfolobus solfataricus GN=SSO2121 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.226e-24
Identity = 65/179 (36.31%), Postives = 106/179 (59.22%), Query Frame = 1
Query:  172 SVEIPPLVGNTAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIA-LRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGW 705
            S E  PL+G   P+   E +  Q    +KL D    ++ +LF +P DFT VC TE  +F+ +Y EF+KLNTE++G+S DS  SH+ W+    K+  + ++ +P+IAD   +++K  G++      A +R +F++D +GV++      + IGR++DE LR ++ALQ V +    V PA W
Sbjct:    2 SEERIPLIGERFPEM--EVITTQG--RIKLPDDYKGRWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSNISHIEWIMWIEKNLKV-EIPFPIIADPMGNVAKRLGMIHAQSSTATVRAVFVVDDKGVVRLILYYPMEIGRNIDEILRAIRALQLV-DKAGVVTPANW 174          
BLAST of CX290839 vs. ExPASy Swiss-Prot
Match: TDXH1_THETN (Probable peroxiredoxin 1 OS=Thermoanaerobacter tengcongensis GN=TTE0270 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 7.946e-23
Identity = 58/134 (43.28%), Postives = 87/134 (64.93%), Query Frame = 1
Query:  265 DYIGKKYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGI-ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQ 663
            DY GK +V LF +P DFT VC TE   F+ +  EF++LNTE++G+S D VFSH+ WV+  + + G+  + +P+IAD    +S   G++ P +G   +R +FI+D +GVI+        +GR+VDE LR L+ALQ
Sbjct:   25 DYAGKWFV-LFSHPADFTPVCTTEFVEFARKAEEFKQLNTELIGLSVDQVFSHIKWVEWIKDNTGV-QIPFPVIADELGRVSNQLGMIHPGKGTNTVRAVFIVDDKGVIRLIMYYPQEVGRNVDEILRALKALQ 156          
BLAST of CX290839 vs. ExPASy Swiss-Prot
Match: TDXH_AERPE (Probable peroxiredoxin OS=Aeropyrum pernix GN=APE_2278 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.150e-22
Identity = 63/176 (35.80%), Postives = 104/176 (59.09%), Query Frame = 1
Query:  187 PLVGNTAPDFAAEAVFDQEFINVKLSD-YIGK-KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGI-ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGW 705
            PL+G   P+   E   D   I  KL D Y+ + K+ +LF +P DFT VC TE  +F+ RY +F++L  +++G+S DSVFSH+ W +   +  G+  + +P+IAD   ++++  G+L  +     +RG+FI+D  GVI+      + +GR VDE LR ++AL+ + ++     PA W
Sbjct:    6 PLIGERFPEM--EVTTDHGVI--KLPDHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGV-RIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKALK-LGDSLKRAVPADW 175          
BLAST of CX290839 vs. ExPASy Swiss-Prot
Match: TDXH1_SULME (Probable peroxiredoxin 1 OS=Sulfolobus metallicus PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.726e-22
Identity = 50/147 (34.01%), Postives = 87/147 (59.18%), Query Frame = 1
Query:  280 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGDK 720
            K++ LF +P DFT VC TE   FS  Y EF++LN E++G+S DS++SH+ W++  ++  G+  + +PLIAD  K +++   ++    G+ +R +F+++ EG+I+      +  GR ++E LR  +A   V        P  W+PG +
Sbjct:   30 KWLFLFAHPADFTPVCTTEFVGFSKVYEEFKRLNVELVGMSVDSIYSHIEWLKDIQERYGI-QVPFPLIADPDKRLARLLDIIDEASGVTIRAVFLVNPEGIIRFMAYYPIEYGRKIEELLRITKA-ALVNYKAKVSLPVDWEPGQE 174          
BLAST of CX290839 vs. ExPASy Swiss-Prot
Match: TDXH_METVS (Probable peroxiredoxin OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0492 PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.147e-21
Identity = 60/172 (34.88%), Postives = 98/172 (56.98%), Query Frame = 1
Query:  226 AVFDQEFINVKLSDYIGK-----------KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQGI-ALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGW 705
            AV  ++F +V+L    GK           K+ +LF +P DFT VC TE  AF  RY +F +LNTE++G+S D VFSH+ WV+  ++   + D+++P+IAD    ++   G++ P +G   +R +F++D  G I+        +GR++DE +R ++ALQ   +      PA W
Sbjct:    2 AVIGEKFPDVELLTTHGKLKLPEHFIEAGKWFVLFSHPGDFTPVCTTEFVAFQKRYDQFRELNTELIGLSIDQVFSHIKWVEWIKEKLDV-DIEFPIIADERGDLAVKLGMISPFKGSNTVRAVFVVDATGTIRAIIYYPQEVGRNMDEVVRLVKALQTADKG--YATPADW 170          
BLAST of CX290839 vs. ExPASy Swiss-Prot
Match: TDXH_METM5 (Probable peroxiredoxin OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0413 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.498e-21
Identity = 54/147 (36.73%), Postives = 87/147 (59.18%), Query Frame = 1
Query:  280 KYVILFFYPLDFTFVCPTEITAFSDRYTEFEKLNTEILGVSTDSVFSHLAWVQTDRKSGGLGDLKYPLIADITKSISKSYGVLIPDQG-IALRGLFIIDKEGVIQHSTINNLAIGRSVDETLRTLQALQYVQENPDEVCPAGWKPGD 717
            K+ +LF +P DFT VC TE  AF  RY +F  LNTE++G+S D VFSH+ WV+  ++   + D+++P+IAD    ++   G++ P +G   +R +F++D  G I+        +GR++DE +R ++ALQ   +      PA W   D
Sbjct:   31 KWFVLFSHPGDFTPVCTTEFVAFQKRYDQFRSLNTELIGLSIDQVFSHIKWVEWIKEKLDV-DIEFPIIADDRGELAVKLGMISPYKGNNTVRAVFVVDATGTIRAIIYYPQEVGRNMDEVVRLVKALQTADKG--YATPANWPEND 174          
The following BLAST results are available for this feature:
BLAST of CX290839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 147
Match NameE-valueIdentityDescription
TDXH_ARCFU2.234e-2536.21Probable peroxiredoxin OS=Archaeoglobus fulgidus G... [more]
TDXH_STAMF2.918e-2535.63Probable peroxiredoxin OS=Staphylothermus marinus ... [more]
TDXH_METJA2.918e-2535.00Probable peroxiredoxin OS=Methanocaldococcus janna... [more]
TDXH_METMA1.448e-2439.25Probable peroxiredoxin OS=Methanosarcina mazei GN=... [more]
TDXH_SULSO3.226e-2436.31Probable peroxiredoxin OS=Sulfolobus solfataricus ... [more]
TDXH1_THETN7.946e-2343.28Probable peroxiredoxin 1 OS=Thermoanaerobacter ten... [more]
TDXH_AERPE5.150e-2235.80Probable peroxiredoxin OS=Aeropyrum pernix GN=APE_... [more]
TDXH1_SULME6.726e-2234.01Probable peroxiredoxin 1 OS=Sulfolobus metallicus ... [more]
TDXH_METVS1.147e-2134.88Probable peroxiredoxin OS=Methanococcus vannielii ... [more]
TDXH_METM51.498e-2136.73Probable peroxiredoxin OS=Methanococcus maripaludi... [more]

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Properties
Property NameValue
Genbank descriptionC02027G03SK IF1 Citrus clementina cDNA clone C02027G03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290839 ID=CX290839; Name=CX290839; organism=Citrus clementina; type=EST; length=733bp
GAGGATTTCCTCTAACCCAAGGCTTTCTCTTCTTCCTCAATCTCCCCTTC
TCAAAACCTAACCATTCCCCGCTCCTTCTCCGGCCTCCGCAATCCCCTCC
AGTCCCAGGTCCCCCGCCCCGTTTCTCTTTCCCGCGGGTCCCGTTCTCGC
AAGTCCTTCGTTGTCAAAGCATCCGTTGAAATACCACCATTGGTGGGCAA
CACGGCACCTGATTTTGCTGCAGAGGCTGTTTTCGATCAAGAGTTCATCA
ATGTCAAGCTTTCGGATTACATTGGGAAGAAATATGTGATTCTCTTTTTC
TACCCGTTGGACTTCACATTTGTTTGCCCCACAGAAATCACTGCTTTCAG
CGACCGATATACTGAATTTGAGAAGCTAAACACAGAGATATTGGGTGTCT
CAACCGACAGTGTGTTTTCACACTTGGCATGGGTCCAAACAGACAGAAAG
TCAGGTGGTCTTGGTGATTTGAAGTACCCACTAATTGCTGATATCACCAA
ATCAATTTCAAAATCCTATGGTGTTCTGATCCCTGATCAGGGAATTGCAT
TGAGAGGACTCTTTATTATTGACAAAGAAGGAGTCATCCAGCACTCAACC
ATTAACAACCTTGCCATTGGTAGGAGTGTTGACGAGACACTGAGAACACT
TCAGGCCTTGCAGTACGTGCAGGAGAACCCAGATGAAGTTTGCCCAGCAG
GATGGAAGCCCGGGGACAAATCATGAAGCCAGA
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