CX290841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.881e-39 Identity = 77/163 (47.24%), Postives = 112/163 (68.71%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 616 K VL+GD G GKS+L++RF + +F +STIG F ++ + +++ +K +IWDTAGQERY ++ YYRGA A+IVYDIT Q+SF+ +W++EL+ + N+V+ L GNK DLL R V+ EEAQA+A EN L F+ETSA A+NV + F + + R+ Sbjct: 12 KTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRI 174
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RAA1B_ARATH (Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.881e-39 Identity = 78/163 (47.85%), Postives = 112/163 (68.71%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 616 K+VL+GD G GKS+L+ RF K +F +STIG F ++TL V+ VK +IWDTAGQERY ++ YYRGA A++VYD+T +A+FE +W++EL+ +PN+V+ L GNK+DL V E+ ++YA++ L FMETSA ATNV D F E+ ++ R+ Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSDLRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRI 177
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.881e-39 Identity = 78/163 (47.85%), Postives = 110/163 (67.48%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 616 KLVL+GD G GKS+L+ RF K +F +STIG F ++T V VK +IWDTAGQERY ++ YYRGA A+++YD+T A+FE A +W++EL+ +PN+V+ L GNK DL V EEA+A+A+ L+FMETSA ATNV + F E+ ++ ++ Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKI 177
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RAB6B_MOUSE (Ras-related protein Rab-6B OS=Mus musculus GN=Rab6b PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.457e-39 Identity = 82/199 (41.21%), Postives = 122/199 (61.31%), Query Frame = 2 Query: 107 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--GM--VLMDRPGERTASASCC 691 GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ S GM + +D+P E AS C Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGC 206
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RAB6B_HUMAN (Ras-related protein Rab-6B OS=Homo sapiens GN=RAB6B PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.457e-39 Identity = 82/199 (41.21%), Postives = 122/199 (61.31%), Query Frame = 2 Query: 107 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--GM--VLMDRPGERTASASCC 691 GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ S GM + +D+P E AS C Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGC 206
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RAB6B_BOVIN (Ras-related protein Rab-6B OS=Bos taurus GN=RAB6B PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 2.457e-39 Identity = 82/199 (41.21%), Postives = 122/199 (61.31%), Query Frame = 2 Query: 107 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPS--GM--VLMDRPGERTASASCC 691 GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK DL D R++T EE + A+E + F+ETSAKT NV +F +A LP ++ S GM + +D+P E AS C Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMIDIKLDKPQEPPASEGGC 206
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.190e-39 Identity = 78/163 (47.85%), Postives = 113/163 (69.33%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 616 KLVL+GD G GKS+L+ RF K +F +STIG F ++TL V+ VK +IWDTAGQERY ++ YYRGA A++VYD+T +A+FE A +W++EL+ +PN+V+ L GNK+DL V E+ +++A+ L+FMETSA ATNV + F E+ ++ R+ Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRI 177
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RYH1_SCHPO (GTP-binding protein ryh1 OS=Schizosaccharomyces pombe GN=ryh1 PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.148e-39 Identity = 81/189 (42.86%), Postives = 121/189 (64.02%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVL--MDRPGERTASASC 688 KLV LG+ GK+SL+ RF+ QF ++TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R ++ AIIVYDITN SF +KW+++++A+ ++++ L GNK DL D R+VT EE + A+E + METSAK NV +F +IA+ LP ++ S ++ +P E +S +C Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPGMENVETQSTQMIDVSIQPNENESSCNC 201
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.080e-38 Identity = 74/163 (45.40%), Postives = 113/163 (69.33%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 616 K+VL+GD G GKS+L+ RF K +F +STIG F +++L V+D +K +IWDTAGQERY ++ YYRGA A++VYD+T ++FE + W++EL+ +PN+V+ L GNK+DL V E+A+++A++ L+FMETSA ATNV + F E+ ++ + Sbjct: 15 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHI 177
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.716e-38 Identity = 81/203 (39.90%), Postives = 122/203 (60.10%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV-----------QPAPNPSGM----VLMDRPGERTASASCC 691 K+VL+GD GKS ++ RF + +F ++TIG F ++TLA+ +VK +IWDTAGQERY ++ YYRGA A++VYDIT + +F+ +W++EL+A + N+V+ L GNK DL D R V E+A+ +AQ+ GLFF+ETSA ATN+ D F + + + Q NP+ + +L+ PG+ C Sbjct: 17 KVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDNQSNGNPASLTGKKILVPGPGQVIPEKKAC 219 The following BLAST results are available for this feature:
BLAST of CX290841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290841 ID=CX290841; Name=CX290841; organism=Citrus clementina; type=EST; length=693bpback to top |