CX290841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RAB6A_CHICK (Ras-related protein Rab-6A OS=Gallus gallus GN=RAB6A PE=2 SV=3) HSP 1 Score: 158.688 bits (400), Expect = 2.716e-38 Identity = 79/199 (39.70%), Postives = 122/199 (61.31%), Query Frame = 2 Query: 107 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMD----RPGERTASASCC 691 GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D T++ ++WDTAGQER+ SL P Y R +AAA++VYDITN SF++ KW+ +++ + ++++ L GNK DL D R+V+ EE + A+E + F+ETSAK NV +F +A LP ++ + S ++D +P E+ S C Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDKSREDMIDIKLEKPQEQPVSEGGC 206
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 3.547e-38 Identity = 80/184 (43.48%), Postives = 116/184 (63.04%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV----------QPAPNPSGMVL 649 KLVL+GD G GKS+L+ RF + +F +STIG F ++++ V+D VK +IWDTAGQERY ++ YYRGA A++VYDIT +FE ++W++EL+ + N+V+ L GNKADL R V+ E+A+A+A+ FFMETSA + NV + F E+ + +V PA P G + Sbjct: 16 KLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDPAALPKGQTI 199
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38 Identity = 74/163 (45.40%), Postives = 113/163 (69.33%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 616 KLVL+GD G GKS+L+ RF + +F +STIG F +++L ++ +K +IWDTAGQERY ++ YYRGA A++VYD+T +FE A +W++EL+ +PN+V+ L GNK+DL V+ E+ +A+A++ L+FMETSA ATNV + F E+ ++ R+ Sbjct: 15 KLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRI 177
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.633e-38 Identity = 77/163 (47.24%), Postives = 107/163 (65.64%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 616 K+VL+GD G GKS+L+ RF + +F +STIG F ++TL V TVK +IWDTAGQERY ++ YYRGA A++VYD+T +FE +W++EL+ + N+V+ L GNK DL R V E+AQ+YA++ GL F+ETSA A NV F I + R+ Sbjct: 14 KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRI 176
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: YPT3_NICPL (Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.032e-37 Identity = 74/163 (45.40%), Postives = 111/163 (68.10%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 616 KLVL+GD G GKS+L+ RF K +F +STIG F +++L +++ +K +IWDTAGQERY ++ YYRGA A++VYD+T ++E +W++EL+ +PN+V+ L GNK+DL V+ +EA+ A+ GL+FMETSA ATNV + F E ++ R+ Sbjct: 15 KLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSDLRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRI 177
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.032e-37 Identity = 73/163 (44.79%), Postives = 112/163 (68.71%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV 616 K+VL+GD G GKS+L+ RF + +F +STIG F +++L V+ VK +IWDTAGQERY ++ YYRGA A++VYD+T ++FE ++W++EL+ +PN+V+ L GNK+DL V +E +A+A+ L+FMETSA +TNV + F E+ ++ R+ Sbjct: 16 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRI 178
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RAB6B_CAEEL (Ras-related protein Rab-6.2 OS=Caenorhabditis elegans GN=rab-6.2 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.348e-37 Identity = 82/203 (40.39%), Postives = 119/203 (58.62%), Query Frame = 2 Query: 95 MATTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRV--QPAPNPSGMVLMDRPGER---TASASC 688 M+ GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R + A++VYDITN SF + KW+ +++ + ++++ L GNK DL D R+VT +E + A+E + F+ETSAK NV +F IA LP + P +V MD +R T SC Sbjct: 1 MSDFGNPLKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLFRRIAGALPGIIKDDPVEPPNVVTMDPIRQRQIVTDEGSC 203
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: YPT53_YEAST (GTP-binding protein YPT53 OS=Saccharomyces cerevisiae GN=YPT53 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.761e-37 Identity = 79/176 (44.89%), Postives = 111/176 (63.07%), Query Frame = 2 Query: 101 TTGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLL------DARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLP 610 T + K+VLLG+ GKSS+VLRFV F E +E TIGAAF ++ + + +KFEIWDTAGQER+ LAPMYYR A AA++V+D+TN+ SF +A+ WV+EL + ++V+AL GNK DLL + R + A Q + L + E SAKT N+ IF + +++P Sbjct: 5 TAAIPTLTIKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKVIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVIALVGNKMDLLNNDDENENRAMKAPAVQNLCERENLLYFEASAKTGENIYQIFQTLGEKVP 180
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RAB6A_PONAB (Ras-related protein Rab-6A OS=Pongo abelii GN=RAB6A PE=2 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 2.299e-37 Identity = 78/199 (39.20%), Postives = 120/199 (60.30%), Query Frame = 2 Query: 107 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMD----RPGERTASASCC 691 GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK DL D R+V+ EE + A+E + F+ETSAK NV +F +A LP ++ + S ++D +P E+ S C Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVSEGGC 206
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RAB6A_HUMAN (Ras-related protein Rab-6A OS=Homo sapiens GN=RAB6A PE=1 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 2.299e-37 Identity = 78/199 (39.20%), Postives = 120/199 (60.30%), Query Frame = 2 Query: 107 GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRLPRVQPAPNPSGMVLMD----RPGERTASASCC 691 GN KLV LG+ GK+SL+ RF+ F ++TIG F S+T+ + D TV+ ++WDTAGQER+ SL P Y R + A++VYDITN SF++ KW+ +++ + ++++ L GNK DL D R+V+ EE + A+E + F+ETSAK NV +F +A LP ++ + S ++D +P E+ S C Sbjct: 8 GNPLRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMIDIKLEKPQEQPVSEGGC 206 The following BLAST results are available for this feature:
BLAST of CX290841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290841 ID=CX290841; Name=CX290841; organism=Citrus clementina; type=EST; length=693bpback to top |