CX290841
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RASH_MSVNS (GTPase HRas OS=Murine sarcoma virus NS.C58 GN=H-RAS PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.162e-19 Identity = 59/177 (33.33%), Postives = 101/177 (57.06%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK-----RLPRVQPAPNPSG 640 KLV++G G GKS+L ++ ++ F++ + TI ++ Q + ++ T +I DTAGQE Y ++ Y R + V+ I N SFE ++ +++ + + + ++ M L GNK DL AR V + +AQ A+ G+ ++ETSAKT V D FY + + +L ++ P P+ SG Sbjct: 5 KLVVVGARGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA-ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNP-PDESG 178
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RASH_HUMAN (GTPase HRas OS=Homo sapiens GN=HRAS PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.162e-19 Identity = 59/177 (33.33%), Postives = 101/177 (57.06%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK-----RLPRVQPAPNPSG 640 KLV++G G GKS+L ++ ++ F++ + TI ++ Q + ++ T +I DTAGQE Y ++ Y R + V+ I N SFE ++ +++ + + + ++ M L GNK DL AR V + +AQ A+ G+ ++ETSAKT V D FY + + +L ++ P P+ SG Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA-ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNP-PDESG 178
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RAB36_HUMAN (Ras-related protein Rab-36 OS=Homo sapiens GN=RAB36 PE=1 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.162e-19 Identity = 55/161 (34.16%), Postives = 85/161 (52.80%), Query Frame = 2 Query: 125 AKLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQE-LQAQGNPNMVMALAGNKADLLDARKVTAEEAQA--YAQENGLFFMETSAKTATNVNDIFYEIA 598 +K+V++GD+ GK+SL+ RF K F ++TIG F + + +IWDTAGQE++ +A YYRGA I +D+T+ + E ++W+++ L+ + + L G K DLL EA A A+E + SAKT NV F +A Sbjct: 124 SKVVVVGDLYVGKTSLIHRFCKNVFDRDYKATIGVDFEIERFEIAGIPYSLQIWDTAGQEKFKCIASAYYRGAQVIITAFDLTDVQTLEHTRQWLEDALRENEAGSCFIFLVGTKKDLLSGAACEQAEADAVHLAREMQAEYWSVSAKTGENVKAFFSRVA 284
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RB40L_HUMAN (Ras-related protein Rab-40A-like OS=Homo sapiens GN=RAB40AL PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 53/158 (33.54%), Postives = 86/158 (54.43%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 601 K +L+GD GKS ++ G G + + T+ ++ VK ++WDT+GQ R+ ++ Y RGA I+VYDI N+ SFE +W+++++ P + L GN+ L R+V E+AQAYA+ G+ F E S N+ + F E+A+ Sbjct: 16 KFLLVGDRDVGKSEILESLQDGTAESPYSHLGGIDYKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHA-PGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELAR 172
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RB40C_MOUSE (Ras-related protein Rab-40C OS=Mus musculus GN=Rab40c PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 52/158 (32.91%), Postives = 87/158 (55.06%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 601 K +L+GD GK ++ G + G + + T+ ++ VK E+WDT+GQ R+ ++ Y RGA ++VYDITN+ SF+ +W++E+ P + L GN+ L R+V E+A+AYA++N + F E S NV + F E+++ Sbjct: 16 KFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHA-PGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSR 172
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RB40C_HUMAN (Ras-related protein Rab-40C OS=Homo sapiens GN=RAB40C PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 52/158 (32.91%), Postives = 87/158 (55.06%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 601 K +L+GD GK ++ G + G + + T+ ++ VK E+WDT+GQ R+ ++ Y RGA ++VYDITN+ SF+ +W++E+ P + L GN+ L R+V E+A+AYA++N + F E S NV + F E+++ Sbjct: 16 KFLLVGDSDVGKGEILESLQDGAAESPYAYSNGIDYKTTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIKEIDEHA-PGVPRILVGNRLHLAFKRQVPTEQARAYAEKNCMTFFEVSPLCNFNVIESFTELSR 172
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RB40B_MOUSE (Ras-related protein Rab-40B OS=Mus musculus GN=Rab40b PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 51/158 (32.28%), Postives = 83/158 (52.53%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 601 K +L+GD GK ++ G G + T+ ++ VK ++WDT+GQ R+ ++ Y RGA ++VYDI N+ SF+ +W++E+ P + L GN+ L R+V E+AQAYA+ G+ F E S N+ + F E+A+ Sbjct: 16 KFLLVGDSDVGKGEILASLQDGAAESPYGHPAGIDHKTTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVVLVYDIANRWSFDGINRWIKEIDEHA-PGVPKILVGNRLHLAFKRQVPTEQAQAYAERLGVTFFEVSPLCNFNITESFTELAR 172
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RB40A_HUMAN (Ras-related protein Rab-40A OS=Homo sapiens GN=RAB40A PE=2 SV=2) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 53/158 (33.54%), Postives = 86/158 (54.43%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK 601 K +L+GD GKS ++ G G + + T+ ++ VK ++WDT+GQ R+ ++ Y RGA I+VYDI N+ SFE +W+++++ P + L GN+ L R+V E+AQAYA+ G+ F E S N+ + F E+A+ Sbjct: 16 KFLLVGDRDVGKSEILESLQDGAAESPYSHLGGIDYKTTTILLDGQRVKLKLWDTSGQGRFCTIFRSYSRGAQGVILVYDIANRWSFEGMDRWIKKIEEHA-PGVPKILVGNRLHLAFKRQVPREQAQAYAERLGVTFFEVSPLCNFNIIESFTELAR 172
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RASK_CYPCA (GTPase KRas OS=Cyprinus carpio GN=kras PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 54/161 (33.54%), Postives = 93/161 (57.76%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQELQ-AQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAKRL 607 KLV++G G GKS+L ++ ++ F++ + TI ++ Q + ++ T +I DTAGQE Y ++ Y R + V+ I N SFE + ++++ + + ++ M L GNK DL +R V ++AQ A+ G+ F+ETSAKT V+D FY + + + Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDL-PSRSVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREI 163
BLAST of CX290841 vs. ExPASy Swiss-Prot
Match: RASH_CHICK (GTPase HRas OS=Gallus gallus GN=HRAS1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 59/177 (33.33%), Postives = 100/177 (56.50%), Query Frame = 2 Query: 128 KLVLLGDVGAGKSSLVLRFVKGQFIEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQASFERAKKWVQEL-QAQGNPNMVMALAGNKADLLDARKVTAEEAQAYAQENGLFFMETSAKTATNVNDIFYEIAK-----RLPRVQPAPNPSG 640 KLV++G G GKS+L ++ ++ F++ + TI ++ Q + ++ T +I DTAGQE Y ++ Y R + V+ I N SFE ++ +++ + + + ++ M L GNK D L AR V +AQ A+ G+ ++ETSAKT V D FY + + +L ++ P P+ SG Sbjct: 5 KLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCD-LPARTVETRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNP-PDESG 178 The following BLAST results are available for this feature:
BLAST of CX290841 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290841 ID=CX290841; Name=CX290841; organism=Citrus clementina; type=EST; length=693bpback to top |