CX290843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290843 vs. ExPASy Swiss-Prot
Match: PWP2_YEAST (Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae GN=PWP2 PE=1 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 7.780e-15 Identity = 50/173 (28.90%), Postives = 87/173 (50.29%), Query Frame = 3 Query: 24 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSE 536 G + S A+ PDG + T + + +K+WD+ S +A F+ H +VTA+ F++ G + +++ DG V+ WDL + +NFR+F ++ N + D SG + S D V SV+ + LSG G +C+ F + +A S D+ +R++ + G E Sbjct: 343 GHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTE-RIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQTG----QLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSIFGRSQQVE 510
BLAST of CX290843 vs. ExPASy Swiss-Prot
Match: Y2800_ANASP (Uncharacterized WD repeat-containing protein alr2800 OS=Anabaena sp. (strain PCC 7120) GN=alr2800 PE=4 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.043e-14 Identity = 50/160 (31.25%), Postives = 81/160 (50.62%), Query Frame = 3 Query: 45 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWN-----CIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 506 S AFHPDG L + + + +K+WD++ + GH V ++FS +G LA++A D +KLWD+ + K R+ +S SV F G LA S D R ++ WN C+KT+ + T + + PD+K + GS DR ++++ Sbjct: 731 SVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGW--VRSVAFSADGQTLASGSGD-RTIKI------WNYHTGECLKTY--IGHTNSVYSIAYSPDSKILVSGSGDRTIKLW 879 HSP 2 Score: 67.3958 bits (163), Expect = 8.902e-11 Identity = 51/158 (32.28%), Postives = 80/158 (50.63%), Query Frame = 3 Query: 45 SAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT-AAHDGVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVF 506 SAAF P+G +L T ++ V++W+VKS + GH V + FS +G LA+ A + VKLW +R ++ + E SV F G LA AS D I+++ + D C++T L+G T CV F PD +A + D ++++ Sbjct: 647 SAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHE--VFSVAFHPDGETLASASGDKTIKLWDI----QDGTCLQT---LTGHTDWVRCVAFSPDGNTLASSAADHTIKLW 795
BLAST of CX290843 vs. ExPASy Swiss-Prot
Match: KTNB1_DANRE (Katanin p80 WD40-containing subunit B1 OS=Danio rerio GN=katnb1 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.916e-13 Identity = 55/163 (33.74%), Postives = 83/163 (50.92%), Query Frame = 3 Query: 24 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFG 509 G +S FHP G L +G+ ++ +K+WDV+ + V ++ GH AV ++FS +G +LA+A+ D VKLWDL K F S S N V F H YL + + R ++ ++ +N I + TG V F PD + GS + LRV+G Sbjct: 103 GHKASISSLDFHPMGEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTS--AVNVVQF-HPNEYLLASGSADRTVKLWDLE-KFNMIGS--SEGETGVVRSVLFNPDGSCLYSGS-ENTLRVYG 258
BLAST of CX290843 vs. ExPASy Swiss-Prot
Match: WD51B_PONAB (WD repeat-containing protein 51B OS=Pongo abelii GN=WDR51B PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = 3 Query: 24 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 506 G TS P+G L T + + + +W+ K A ++ GH VT++ FS +G LA+A+ D V+LW K F F++ + P SVDF G +LA AS D I+V+ + + ++ + T C KF PD + I S D+ ++++ Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA--PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR------HTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
BLAST of CX290843 vs. ExPASy Swiss-Prot
Match: WD51B_HUMAN (WD repeat-containing protein 51B OS=Homo sapiens GN=WDR51B PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = 3 Query: 24 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVF 506 G TS P+G L T + + + +W+ K A ++ GH VT++ FS +G LA+A+ D V+LW K F F++ + P SVDF G +LA AS D I+V+ + + ++ + T C KF PD + I S D+ ++++ Sbjct: 16 GHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA--PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYR------HTHWVRCAKFSPDGRLIVSCSEDKTIKIW 171
BLAST of CX290843 vs. ExPASy Swiss-Prot
Match: PWP2_NEUCR (Periodic tryptophan protein 2 homolog OS=Neurospora crassa GN=B18D24.40 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13 Identity = 49/173 (28.32%), Postives = 81/173 (46.82%), Query Frame = 3 Query: 24 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHDG-VKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASADIRVYQVASVKADWNCIKTFPDLSG-TGKATCVKFGPDAKYIAVGSMDRNLRVFGLPGNDAPSE 536 G + S + PDG + T + +K+WD +S + F H +TA FS+ G L T++ DG ++ WDL + +NFR+F ++ + + D SG +A S D + SV+ + LSG G + + F P+ + GS DR R++ + SE Sbjct: 337 GHFDSMNSLVYSPDGQRIVTVADDGKIKVWDTESGFCIVTFTEHTSGITACEFSKKGNVLFTSSLDGSIRAWDLIRYRNFRTF-TAPERLSFSCMAVDPSGEIVAAGSVDSFDIHIWSVQTG----QLLDRLSGHEGPVSSLAFAPNGGLLVSGSWDRTARIWSIFNRTQTSE 504
BLAST of CX290843 vs. ExPASy Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13 Identity = 55/165 (33.33%), Postives = 81/165 (49.09%), Query Frame = 3 Query: 24 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFG 509 G S FHP G + +G+ + +K+WD++ + V ++ GH AV + FS +G +LA+AA D VKLWDL K F P N V+F + LA S+D IR + + + +CI+ P G V F PD + G D +LRV+G Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG--PVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV-VSCIEGEP-----GPVRSVLFNPDGCCLYSGCQD-SLRVYG 258
BLAST of CX290843 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.269e-13 Identity = 55/165 (33.33%), Postives = 81/165 (49.09%), Query Frame = 3 Query: 24 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFG 509 G S FHP G + +G+ + +K+WD++ + V ++ GH AV + FS +G +LA+AA D VKLWDL K F P N V+F + LA S+D IR + + + +CI+ P G V F PD + G D +LRV+G Sbjct: 103 GHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTG--PVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQV-VSCIEGEP-----GPVRSVLFNPDGCCLYSGCQD-SLRVYG 258
BLAST of CX290843 vs. ExPASy Swiss-Prot
Match: KTNB1_CHICK (Katanin p80 WD40-containing subunit B1 OS=Gallus gallus GN=KATNB1 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13 Identity = 55/165 (33.33%), Postives = 80/165 (48.48%), Query Frame = 3 Query: 24 GRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLATAAHD-GVKLWDLRKLKNFRSFESSDSETPTNSVDFDHSGSYLAVASAD--IRVYQVASVKADWNCIKTFPDLSGTGKATCVKFGPDAKYIAVGSMDRNLRVFG 509 G S FHP G + +G+ + +K+WDV+ + + K+ H AV + FS +G +LA+AA D VKLWDL K FE + P N V+F S LA S+D IR + + +CI+ C+ F PD + G D +LRV+G Sbjct: 103 GHKANICSLDFHPYGSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKVM--FEFTGHSGPVNVVEFHPSEYLLASGSSDRTIRFWDLEKFHV-VSCIE-----EEATPVRCILFNPDGCCLYGGFQD-SLRVYG 258
BLAST of CX290843 vs. ExPASy Swiss-Prot
Match: YIDC_SCHPO (Uncharacterized WD repeat-containing protein C227.12 OS=Schizosaccharomyces pombe GN=SPAC227.12 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12 Identity = 33/78 (42.31%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 21 DGRPEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVAKFDGHVGAVTAISFSENGYYLAT-AAHDGVKLWDLRKL 251 +G EG S A PDG ++ +G ++A+ +IWD++S ++ D H+ + A+++S NGY LAT +A D VK+WDLRK+ Sbjct: 304 EGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKV 381 The following BLAST results are available for this feature:
BLAST of CX290843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290843 ID=CX290843; Name=CX290843; organism=Citrus clementina; type=EST; length=726bpback to top |