CX290847

Overview
NameCX290847
Unique NameCX290847
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_THIDA (Adenylate kinase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=adk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 54/178 (30.34%), Postives = 92/178 (51.69%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ-----------------------------GREDDNVETIRKRFKVFLESSLPVVQYY 640
            LGGPG+GKGTQ   I E +G   +S GD+LRA+IK+G+E G   + ++  G +V  ++ I +++  ++E+   + +L DGFPR      A +A   +  ++V+  D ++EE+ +R+  R                                R+DD  ET++KR  V+   + P+V+YY
Sbjct:    6 LGGPGAGKGTQANYIKEKYGIPQISTGDMLRAQIKAGTELGMKAKAIMDAGGLVSDDIIIGMVKARLQEADCKNGYLFDGFPRTIPQAEAMKA-AGVPIDYVVEIDVADEEIIKRMSGRRVHVASGRTYHVVFNPPKVAGKDDVTGEDLIQRDDDQEETVKKRLDVYHAQTEPLVKYY 182          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_MARAV (Adenylate kinase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=adk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 55/180 (30.56%), Postives = 92/180 (51.11%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR--NQG---------------------------REDDNVETIRKRFKVFLESSLPVVQYYEA 646
            LG PG+GKGTQ   I E F    +S GD+LRA +K+ SE G  ++ ++  G +V  ++ I L+++ +++    + FL+DGFPR      A +    I  ++V+     +EE+  R+  R  ++G                           REDD  ET+RKR K++ E + P+V +Y++
Sbjct:    6 LGAPGAGKGTQAQFITERFEIPQISTGDMLRAAVKAESELGLQVKEVMASGGLVSDDIIIALIEERIQQPDCKNGFLLDGFPRTIPQAEALKD-QGIAIDYVVEISVEDEEIVSRLSGRRVHEGSGRIYHVKYDPPKVEGKDDETGEALIQREDDKEETVRKRLKIYHEQTAPLVGFYQS 184          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_LEPIN (Adenylate kinase OS=Leptospira interrogans GN=adk PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 49/164 (29.88%), Postives = 89/164 (54.27%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNRN--QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            +G PG+GKGTQ   + E      +S GD+LR  +K+ +  G   +  +  G +VP  V I +++  + E+   + FL+DGFPR  E   A + + K E + +   +     + E+ +R+L R   +GR DDN  TI+ R   + + +LP++ +Y  + K+ +++
Sbjct:    7 MGPPGAGKGTQAKILCERLSIPQISTGDILREAVKNQTAMGIEAKRYMDAGDLVPDSVVIGIIKDRIREADCKNGFLLDGFPRTVEQAEALDTLLKNEGKSIDKAINLQVPDAELLKRLLGRAEIEGRADDNEVTIKNRLDNYNKKTLPLLDFYATRKKLSQVN 170          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_LEPIC (Adenylate kinase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=adk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 49/164 (29.88%), Postives = 89/164 (54.27%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFV---LFFDCSEEEMERRILNRN--QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            +G PG+GKGTQ   + E      +S GD+LR  +K+ +  G   +  +  G +VP  V I +++  + E+   + FL+DGFPR  E   A + + K E + +   +     + E+ +R+L R   +GR DDN  TI+ R   + + +LP++ +Y  + K+ +++
Sbjct:    7 MGPPGAGKGTQAKILCERLSIPQISTGDILREAVKNQTAMGIEAKRYMDAGDLVPDSVVIGIIKDRIREADCKNGFLLDGFPRTVEQAEALDTLLKNEGKSIDKAINLQVPDAELLKRLLGRAEIEGRADDNEVTIKNRLDNYNKKTLPLLDFYATRKKLSQVN 170          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_DEIDV (Adenylate kinase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=adk PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17
Identity = 51/169 (30.18%), Postives = 88/169 (52.07%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR-NQG-------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PG+GKGTQ   + +    T +S GD+LR  +  G+E G  ++ ++  G +VP E+ I L++  +      + + DGFPR      A +A+ +        V   +  ++ +  RI+ R NQ        R DDN ET R+R +V+ E + P++ YY  +G++  ++
Sbjct:   12 LGPPGAGKGTQAERLAQEQSLTKISTGDILRDHVARGTELGQQVKPILDAGHLVPDEILIALIRDKLAGMRPVRVIFDGFPRTGAQAEALDALLEDLGAPVTAVPLLEVPDQVLIDRIVERGNQAQARGEAVRSDDNEETARRRQQVYREQTQPLIDYYAGRGQLYTVN 180          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_THESQ (Adenylate kinase OS=Thermotoga sp. (strain RQ2) GN=adk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 55/192 (28.65%), Postives = 94/192 (48.96%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEI-KSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PG+GKGT    + E  G  H+S GD+ R  + K   E G  I+ +++ G++VP E+  +++++ + E   ++ F++DG+PR        +   K    E    + F+  EE + +R+  R                                REDD  ET+R R+KV+LE + PV+ YY+ KG ++++D
Sbjct:    8 LGPPGAGKGTYAKRLQEITGIPHISTGDIFRDIVKKENDELGKKIKEIMERGELVPDELVNEVVKRRLSEKDCERGFILDGYPRTVAQAEFLDDFLKNQNKELTAAVLFEVPEEVVVQRLTARRICPKCGRIYNLISLPPKEDELCDDCKVKLVQREDDKEETVRHRYKVYLEKTQPVIDYYDKKGILKRVD 199          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_THEP1 (Adenylate kinase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=adk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 55/192 (28.65%), Postives = 94/192 (48.96%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEI-KSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PG+GKGT    + E  G  H+S GD+ R  + K   E G  I+ +++ G++VP E+  +++++ + E   ++ F++DG+PR        +   K    E    + F+  EE + +R+  R                                REDD  ET+R R+KV+LE + PV+ YY+ KG ++++D
Sbjct:    8 LGPPGAGKGTYAKRLQEITGIPHISTGDIFRDIVKKENDELGKKIKEIMERGELVPDELVNEVVKRRLSEKDCERGFILDGYPRTVAQAEFLDDFLKNQNKELTAAVLFEVPEEVVVQRLTARRICPKCGRIYNLISLPPKEDELCDDCKVKLVQREDDKEETVRHRYKVYLEKTQPVIDYYDKKGILKRVD 199          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_PSEA6 (Adenylate kinase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=adk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 57/181 (31.49%), Postives = 90/181 (49.72%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR------------------NQG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAK 649
            LG PG+GKGTQ   ++  +G   +S GD+LRA IK+G+E G   + ++ EGK+V  E+ I L+ ++  ++     FL+DGFPR      A +    I  + V+ FD  +E +  R+  R                  N G           R DD  +T+R R  V+ E + P+V YY+++
Sbjct:    6 LGAPGAGKGTQAQYLMGKYGIPQISTGDMLRAAIKAGTELGNAAKRVMDEGKLVSDELIIGLVKERIAQDDCKGGFLLDGFPRTIPQADAMKE-AGINVDHVIEFDVPDEVIVERMAGRRVHPASGRVYHLQYNPPQNDGKDDETGEDLVIRADDQEDTVRHRLGVYHEQTKPLVDYYQSE 185          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_PECCP (Adenylate kinase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=adk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 56/179 (31.28%), Postives = 93/179 (51.96%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYYE 643
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+E G   + ++  GK+V  E+ I L+ ++  ++   + FL+DGFPR      A + V  I  ++V+ F   +E +  RI+ R                   +G           R+DD+ +T+RKR   + + + P+V YY+
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKAGTELGKQAKEIMDAGKLVTDELVIALVKERIAQDDCRNGFLLDGFPRTIPQADAMKDV-GINVDYVIEFAVPDELIIDRIVGRRVHAASGRVYHVKFNPPKVEGKDDVTGEDLTIRKDDHEDTVRKRLVEYHQQTAPLVSYYQ 183          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_METBU (Adenylate kinase OS=Methanococcoides burtonii (strain DSM 6242) GN=adk PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17
Identity = 54/189 (28.57%), Postives = 91/189 (48.15%), Query Frame = 2
Query:  200 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNRN----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            G PG+GKGTQ   + +H+   H+S GD+LRA ++ G++ G   +  + +G++VP EV I +++  + ES     +L+DG+PR      A  ++     +  E VL  D ++EE+  R+  R                               R+DD  + IR+R   + E + P++ YY  KG +  ID
Sbjct:    7 GPPGAGKGTQAKELDKHYQIPHISTGDILRANVRDGTKLGKEAKGYMDKGELVPDEVLIGVIKNRLAESDCKPGYLLDGYPRTTPQADALSSILVEIGMPLEVVLNIDVADEELVTRLCGRYVCTCGESYHMKFNPPKKENVCDACGADLYQRDDDKEDVIRQRLDSYKEKTQPLISYYGEKGLLVDID 195          
The following BLAST results are available for this feature:
BLAST of CX290847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_THIDA2.485e-1730.34Adenylate kinase OS=Thiobacillus denitrificans (st... [more]
KAD_MARAV2.485e-1730.56Adenylate kinase OS=Marinobacter aquaeolei (strain... [more]
KAD_LEPIN2.485e-1729.88Adenylate kinase OS=Leptospira interrogans GN=adk ... [more]
KAD_LEPIC2.485e-1729.88Adenylate kinase OS=Leptospira interrogans serogro... [more]
KAD_DEIDV2.485e-1730.18Adenylate kinase OS=Deinococcus deserti (strain VC... [more]
KAD_THESQ3.245e-1728.65Adenylate kinase OS=Thermotoga sp. (strain RQ2) GN... [more]
KAD_THEP13.245e-1728.65Adenylate kinase OS=Thermotoga petrophila (strain ... [more]
KAD_PSEA63.245e-1731.49Adenylate kinase OS=Pseudoalteromonas atlantica (s... [more]
KAD_PECCP3.245e-1731.28Adenylate kinase OS=Pectobacterium carotovorum sub... [more]
KAD_METBU3.245e-1728.57Adenylate kinase OS=Methanococcoides burtonii (str... [more]

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Properties
Property NameValue
Genbank descriptionC02027G11SK IF1 Citrus clementina cDNA clone C02027G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290847 ID=CX290847; Name=CX290847; organism=Citrus clementina; type=EST; length=672bp
GAGGATTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTC
TCTCTCCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGA
CTGAGTTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGA
AGCAGATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGG
GTGGACCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACAC
TTTGGATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAA
ATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAA
AAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAG
GAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGA
AAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTC
TGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGG
AATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGGAAGCGGTTTAA
GGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGG
GTAAAGTTCGGAAGATTGATGC
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