CX290847

Overview
NameCX290847
Unique NameCX290847
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_CORU7 (Adenylate kinase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=adk PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.099e-24
Identity = 63/162 (38.89%), Postives = 96/162 (59.26%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEES-GNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PG+GKGTQ   + +     H+S GDL RA I  G+E G   Q  +  GK+VP+EVT  +++  +EE+   + FL+DGFPR  E     E + K   ++ + V+ +  SE+ +  R+L+R  GR DDN  TIR R +V+ E + P++ YY+  G++  ID
Sbjct:    6 LGPPGAGKGTQAQLLSDALNIPHISTGDLFRANISQGTELGKQAQEYMDAGKLVPTEVTANMVRARLEEADAANGFLLDGFPRTIEQADLLEEMLKEKDLKLDAVINYQVSEDVVVERMLSR--GRNDDNESTIRTRLQVYREETAPLIDYYQ--GRILNID 163          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_SYNR3 (Adenylate kinase OS=Synechococcus sp. (strain RCC307) GN=adk PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.106e-24
Identity = 58/160 (36.25%), Postives = 100/160 (62.50%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTK--IEP-EFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKI 667
            +G PG+GKGTQ   +  + G  HLS GDLLRAE+K+GSE G   + ++  G++V   + + +++  + +S +  +L+DGFPRN     A +A+     +P + VL  +  ++E+ +R+L R  GR DDN E IR R  V+ E + P++ +YE +G+++++
Sbjct:    8 VGPPGAGKGTQAERLAANHGLLHLSTGDLLRAEVKAGSELGKEAEAVMNRGELVSDALVLAIVRSRL-QSHSGGWLLDGFPRNLAQAEALDALLSELNQPLQSVLLMELDDDELVQRLLAR--GRADDNEEVIRHRLSVYREQTAPLINHYEQRGQLKRV 164          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_STRMU (Adenylate kinase OS=Streptococcus mutans GN=adk PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.360e-23
Identity = 65/187 (34.76%), Postives = 101/187 (54.01%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK--FLIDGFPRNEENRAAFEAV---TKIEPEFVLFFD----CSEEEMERRILNRNQG--------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            +G PG+GKGTQ A IVE FG  H+S GD+ RA + + +E GT+ ++ I +G++VP EVT  ++++ + ES   K  FL+DG+PR  E   A + +     ++ + V+  D    C  E +  RI+NR  G                    REDD  ET+++R  V +    P+++YY  KG V  I+
Sbjct:    6 MGLPGAGKGTQAAKIVEKFGLAHISTGDMFRAAMANQTEMGTLAKSFIDKGELVPDEVTNGIVKERLSESDITKKGFLLDGYPRTIEQAHALDEILSKLNLKLDGVINIDVDPACLVERLSGRIINRKTGETYHKVFNPPADYNEDDYYQREDDKPETVKRRLDVNIAQGHPIIEYYRNKGLVYDIE 192          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_BACTN (Adenylate kinase OS=Bacteroides thetaiotaomicron GN=adk PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.777e-23
Identity = 64/166 (38.55%), Postives = 98/166 (59.04%), Query Frame = 2
Query:  200 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLI-DGFPRNEENRAAFEAVTKIEPE------FVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            G PGSGKGTQ   IVE +G  H+S GD+LRAEIK+G+E G   +  I +G+++P E+ I +L    +   + K +I DGFPR     A  EA+ K+  E       +L  +  E+E+  R++ R  + GR DDN ETI+KR  V+   + P++ +Y+ + K + I+
Sbjct:    8 GAPGSGKGTQSERIVEKYGINHISTGDVLRAEIKNGTELGKTAKGYIDQGQLIPDELMIDILASVFDSFKDSKGVIFDGFPR---TIAQAEALKKMLAERGQDVSVMLDLEVPEDELMVRLIKRGKDSGRADDNEETIKKRLHVYHSQTSPLIDWYKNEKKYQHIN 170          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_PORGI (Adenylate kinase OS=Porphyromonas gingivalis GN=adk PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.320e-23
Identity = 58/162 (35.80%), Postives = 89/162 (54.94%), Query Frame = 2
Query:  200 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKI 667
            G PGSGKGTQ   ++  +G+ H+S G+LLRAEIK+ +E G      I EG +VP  + + +++K +      +  + DGFPR      A E +      + + VL     EE +  R+LNR +  GR DDN+ETIRKR  V+   + P+V ++  K  +  +
Sbjct:    8 GAPGSGKGTQSEELIRRYGFRHISTGELLRAEIKAQTELGQAAAGYINEGHLVPDSLIVDMMEKLISTLVDTEGIIFDGFPRTIPQAEAMETMLAHHGWKVDIVLNLQVPEEMLIERLLNRGKVSGRSDDNIETIRKRLDVYANETAPLVDFFTRKNVLHNV 169          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_PORG3 (Adenylate kinase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=adk PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.320e-23
Identity = 58/162 (35.80%), Postives = 89/162 (54.94%), Query Frame = 2
Query:  200 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKI 667
            G PGSGKGTQ   ++  +G+ H+S G+LLRAEIK+ +E G      I EG +VP  + + +++K +      +  + DGFPR      A E +      + + VL     EE +  R+LNR +  GR DDN+ETIRKR  V+   + P+V ++  K  +  +
Sbjct:    8 GAPGSGKGTQSEELIRRYGFRHISTGELLRAEIKAQTELGQAAAGYINEGHLVPDSLIVDMMEKLISTLVDTEGIIFDGFPRTIPQAEAMETMLAHHGWKVDIVLNLQVPEEMLIERLLNRGKISGRSDDNIETIRKRLDVYANETAPLVDFFTRKNVLHNV 169          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_STRM5 (Adenylate kinase OS=Stenotrophomonas maltophilia (strain R551-3) GN=adk PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.031e-23
Identity = 61/164 (37.20%), Postives = 99/164 (60.37%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEA-VTKI-EP-EFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PGSGKGTQ   + E  G  H+S GD+LRAEI +GSE G   + ++  G +V  ++ + +L+  + ++   K F++DG+PRN     A +  + KI +P + V+  D + E +  RI  R   QGR DD+ E +R+R +V+ + + PVV +Y A+G + ++D
Sbjct:    6 LGPPGSGKGTQATRLKEKLGIAHISTGDMLRAEIAAGSELGKQAKAVMDAGNLVSDDILLGMLESRLTQADVAKGFILDGYPRNVAQANAMDGLLAKIGQPLDAVVQLDVATELLVDRIAGRAKEQGRADDSPEAVRQRLQVYNDQTAPVVDFYAARGTLARVD 169          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_THEEB (Adenylate kinase OS=Thermosynechococcus elongatus (strain BP-1) GN=adk PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.958e-23
Identity = 62/167 (37.13%), Postives = 93/167 (55.69%), Query Frame = 2
Query:  200 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKI---EPEFVLFFDCSEEEMERRILNR------NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            GGPGSGKGTQ A +    G  H+S GD+LRAE  +G+  G   Q+ +  G++VP +V + ++   +++      +L+DGFPRN    A FE + K    + +++LF D     ++ R LNR       Q R DD  ETI KR +V+   +LP++Q Y +  K   ID
Sbjct:    7 GGPGSGKGTQAAILTTLLGIPHISTGDILRAERAAGTLLGQQAQSYMDRGELVPDQVIVDMVANRLQQPDTAAGWLLDGFPRNGAQAAVFEEMLKSIHQDYDYLLFLDVPAAILQERALNRAKQAVNGQQRSDDTPETILKRLQVYERETLPMIQQYMSHPKFVPID 173          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_CORA7 (Adenylate kinase OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=adk PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 3.958e-23
Identity = 63/169 (37.28%), Postives = 99/169 (58.58%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYY-------EAKGKVRKID 670
            LG PG+GKGTQ A + E  G  H+S GDL RA I  G+  G   ++ I  GK+VP++VT ++++  + ++   D FL+DGFPR  +     E +     ++ + VL F+ SE+ +  R+L R  GR DD  ETIR R  V+ E + P++++Y       +A+G V +I+
Sbjct:    6 LGPPGAGKGTQAALLSEKLGVPHISTGDLFRANIGEGTPLGLEAKSYIDAGKLVPTDVTARMVEDRLNQDDAKDGFLLDGFPRTVQQADILEKLLSDKDLKLDGVLNFEVSEDVVVERMLAR--GRADDTEETIRTRLGVYREETFPLIEHYGDAIISIKAEGTVEEIN 172          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_LEPBP (Adenylate kinase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=adk PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 6.751e-23
Identity = 58/164 (35.37%), Postives = 96/164 (58.54%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            +G PG+GKGTQ   I E +    +S GD+LRA +K+G+  G   +  +  G +VP  V I +++ + +E    + F++DGFPR  E   A   + K   +E + V+  D  +EE+ +R+L R   +GR DDN ETI+ R   +   +LP++ +Y+A G +R+I+
Sbjct:    7 MGPPGAGKGTQADIIKEKYNIPQISTGDILRAAVKNGTAMGIEAKKYMDAGDLVPDAVVIGIIRDRLVEADCANGFILDGFPRTVEQAKALSEILKELHMELDSVVNLDVPDEELVKRLLGRAIKEGRSDDNEETIKNRLHTYNTKTLPLIDFYKATGILRQIN 170          
The following BLAST results are available for this feature:
BLAST of CX290847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_CORU72.099e-2438.89Adenylate kinase OS=Corynebacterium urealyticum (s... [more]
KAD_SYNR36.106e-2436.25Adenylate kinase OS=Synechococcus sp. (strain RCC3... [more]
KAD_STRMU1.360e-2334.76Adenylate kinase OS=Streptococcus mutans GN=adk PE... [more]
KAD_BACTN1.777e-2338.55Adenylate kinase OS=Bacteroides thetaiotaomicron G... [more]
KAD_PORGI2.320e-2335.80Adenylate kinase OS=Porphyromonas gingivalis GN=ad... [more]
KAD_PORG32.320e-2335.80Adenylate kinase OS=Porphyromonas gingivalis (stra... [more]
KAD_STRM53.031e-2337.20Adenylate kinase OS=Stenotrophomonas maltophilia (... [more]
KAD_THEEB3.958e-2337.13Adenylate kinase OS=Thermosynechococcus elongatus ... [more]
KAD_CORA73.958e-2337.28Adenylate kinase OS=Corynebacterium aurimucosum (s... [more]
KAD_LEPBP6.751e-2335.37Adenylate kinase OS=Leptospira biflexa serovar Pat... [more]

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Properties
Property NameValue
Genbank descriptionC02027G11SK IF1 Citrus clementina cDNA clone C02027G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290847 ID=CX290847; Name=CX290847; organism=Citrus clementina; type=EST; length=672bp
GAGGATTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTC
TCTCTCCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGA
CTGAGTTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGA
AGCAGATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGG
GTGGACCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACAC
TTTGGATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAA
ATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAA
AAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAG
GAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGA
AAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTC
TGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGG
AATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGGAAGCGGTTTAA
GGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGG
GTAAAGTTCGGAAGATTGATGC
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