CX290847

Overview
NameCX290847
Unique NameCX290847
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_PSEFS (Adenylate kinase OS=Pseudomonas fluorescens (strain SBW25) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 60/189 (31.75%), Postives = 95/189 (50.26%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTK--IEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYYE----AKGK 655
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+G+E G + ++++  G +V  ++ I L+ ++  +E   + FL DGFPR        EA+ K  +E + V+     +EE+ +RI  R                   +G           R+DD  ET+R R  V+   + P+V +Y+    A+GK
Sbjct:    6 LGAPGAGKGTQAKFITEKFGIPQISTGDMLRAAVKAGTELGLIAKSVMDSGGLVSDDLIINLVKERISQEDCKNGFLFDGFPRTIPQA---EALVKAGVELDAVVEIAVEDEEIVQRIAGRRVHEASGRVYHTVYNPPKVEGKDDVTGDDLVQRKDDTEETVRHRLSVYHSQTKPLVDFYQKLSAAQGK 191          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_METBF (Adenylate kinase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 53/189 (28.04%), Postives = 92/189 (48.68%), Query Frame = 2
Query:  200 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAV---TKIEPEFVLFFDCSEEEMERRILNR---NQG-------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            G PG+GKGTQ   +V+++G   +S GD+LRA ++ G+E G   +  + +G++VP EV I +++  ++E   +K F++DG+PR      A   +        + VL  +  +EE+  RI  R   N G                         R DD  E ++ R  V+ + + P++ YY  +G +  +D
Sbjct:    7 GPPGAGKGTQAKKMVDNYGIPQISTGDILRANVREGTELGLAAKEYMDKGELVPDEVLIGIIKNRLKEQDCEKGFILDGYPRTIPQADALAVILDEINKPIDVVLNLEVPDEELIERISGRLMCNCGASYHRTFNPPKKDDVCDICGGKVFQRADDKEEAVKNRLNVYKKQTEPLIDYYTKQGLLVTLD 195          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_DIAST (Adenylate kinase OS=Diaphorobacter sp. (strain TPSY) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 55/183 (30.05%), Postives = 89/183 (48.63%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ-----------------------------GREDDNVETIRKRFKVFLESSLPVVQYYEAKGK 655
            LG PG+GKGTQ A I + FG   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + E      FL DGFPR      A +A   ++ ++VL  D   + +  R+  R                                REDD  ET++KR +V+ + + P+V YY +  K
Sbjct:    6 LGAPGAGKGTQAAFICQKFGIPQISTGDMLRAAVKAGTPLGLQAKAVMDAGQLVSDDLIINLVKERIAEPDCAQGFLFDGFPRTIPQADAMKA-AGVKLDYVLEIDVPFDAIIERMSGRRSHPASGRTYHVKFNPPKVEGKDDVTGEPLVQREDDKEETVKKRLQVYSDQTRPLVDYYSSWAK 187          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_CHLP8 (Adenylate kinase OS=Chlorobaculum parvum (strain NCIB 8327) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 58/178 (32.58%), Postives = 88/178 (49.44%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYY 640
            LG PG+GKGTQ   I E F    +S GD+LRA +K+ SE G   + ++ EG +VP ++ I L+++ +EE    +  L DGFPR      A      I  + ++  D  +EE+ +R+  R                   +G           R+DD  ET+RKR KV+ + + P+V YY
Sbjct:    6 LGAPGAGKGTQAQYISEAFDIPQISTGDMLRAAVKAQSELGMAAKKVMDEGGLVPDDIIIGLVKERIEEDDCANGCLFDGFPRTIAQADALR-TEGIRIDNIIEIDVPDEEIIKRMSGRRVHPASGRTYHIVFNPPAVEGKDDVTGEDLVQRDDDTEETVRKRLKVYHDQTEPLVGYY 182          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_AGRT5 (Adenylate kinase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 53/170 (31.18%), Postives = 89/170 (52.35%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKIEP--EFVLFFDCSEEEMERRILNR--------NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PG+GKGTQ   + + +G   LS GD+LRA + +G+E G   + ++  G +V  ++  +++ + +E     K F++DG+PR   + +A  + + K     + V+     EE + RRI NR           R DDN E  RKR   + E + P+  YY  +G++  +D
Sbjct:    6 LGPPGAGKGTQAKRLTDKYGIPQLSTGDMLRAAVSAGTEIGKRAKAVMDAGGLVSDDIVNQIVSERIEAPDCAKGFILDGYPRTVPQAKALADNMRKKNQVLDAVIELKVDEEALIRRIENRVAETIAAGGTVRSDDNPEAFRKRLTEYREKTAPLSAYYSEQGELVTLD 175          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_ACISJ (Adenylate kinase OS=Acidovorax sp. (strain JS42) GN=adk PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 55/183 (30.05%), Postives = 89/183 (48.63%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ-----------------------------GREDDNVETIRKRFKVFLESSLPVVQYYEAKGK 655
            LG PG+GKGTQ A I + FG   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + E      FL DGFPR      A +A   ++ ++VL  D   + +  R+  R                                REDD  ET++KR +V+ + + P+V YY +  K
Sbjct:    6 LGAPGAGKGTQAAFICQKFGIPQISTGDMLRAAVKAGTPLGLQAKAVMDAGQLVSDDLIINLVKERIAEPDCAQGFLFDGFPRTIPQADAMKA-AGVKLDYVLEIDVPFDAIIERMSGRRSHPASGRTYHVKFNPPKVEGKDDVTGEPLVQREDDKEETVKKRLQVYSDQTRPLVDYYSSWAK 187          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_SHESW (Adenylate kinase OS=Shewanella sp. (strain W3-18-1) GN=adk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16
Identity = 58/184 (31.52%), Postives = 92/184 (50.00%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKV 658
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R                   +G           R DD   T+RKR  ++ E + P+V+YY   GKV
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCAKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLAIRPDDEEATVRKRLAIYHEQTKPLVEYY---GKV 185          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_SHEPC (Adenylate kinase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=adk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16
Identity = 58/184 (31.52%), Postives = 92/184 (50.00%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKV 658
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R                   +G           R DD   T+RKR  ++ E + P+V+YY   GKV
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCAKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLAIRPDDEEATVRKRLAIYHEQTKPLVEYY---GKV 185          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_SHEHH (Adenylate kinase OS=Shewanella halifaxensis (strain HAW-EB4) GN=adk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16
Identity = 60/187 (32.09%), Postives = 93/187 (49.73%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR--------------NQG---------------REDDNVETIRKRFKVFLESSLPVVQYY---EAKGKV 658
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  E+ I L+ ++  ++     FL+DGFPR      A  A + I  + V+  D  +EE+ +R+  R              NQ                R DD   T+RKR  ++ E + P+V+YY    AKG V
Sbjct:    6 LGAPGAGKGTQAQFIMEKYGVPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDELIIGLVKERVAQDDCAAGFLLDGFPRTIPQADAM-ASSGIALDHVIEIDVPDEEIVKRMSGRRVHPGSGRVYHIVFNQPKVEGKDDVTGEDLAIRPDDEESTVRKRLDIYHEQTKPLVEYYGAVAAKGDV 191          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_SHEFN (Adenylate kinase OS=Shewanella frigidimarina (strain NCIMB 400) GN=adk PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16
Identity = 59/184 (32.07%), Postives = 92/184 (50.00%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKV 658
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   IE + V+  D  +EE+ +R+  R                   +G           R DD   T+RKR  ++ E + P+V YY   GKV
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQEDCVKGFLLDGFPRTIPQADAM-AENGIEIDHVIEIDVPDEEIVKRMSGRRVHSGSGRVYHVVFNPPKVEGKDDVTGEDLSIRPDDEESTVRKRLGIYHEQTKPLVDYY---GKV 185          
The following BLAST results are available for this feature:
BLAST of CX290847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_PSEFS2.104e-1631.75Adenylate kinase OS=Pseudomonas fluorescens (strai... [more]
KAD_METBF2.104e-1628.04Adenylate kinase OS=Methanosarcina barkeri (strain... [more]
KAD_DIAST2.104e-1630.05Adenylate kinase OS=Diaphorobacter sp. (strain TPS... [more]
KAD_CHLP82.104e-1632.58Adenylate kinase OS=Chlorobaculum parvum (strain N... [more]
KAD_AGRT52.104e-1631.18Adenylate kinase OS=Agrobacterium tumefaciens (str... [more]
KAD_ACISJ2.104e-1630.05Adenylate kinase OS=Acidovorax sp. (strain JS42) G... [more]
KAD_SHESW2.747e-1631.52Adenylate kinase OS=Shewanella sp. (strain W3-18-1... [more]
KAD_SHEPC2.747e-1631.52Adenylate kinase OS=Shewanella putrefaciens (strai... [more]
KAD_SHEHH2.747e-1632.09Adenylate kinase OS=Shewanella halifaxensis (strai... [more]
KAD_SHEFN2.747e-1632.07Adenylate kinase OS=Shewanella frigidimarina (stra... [more]

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Properties
Property NameValue
Genbank descriptionC02027G11SK IF1 Citrus clementina cDNA clone C02027G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290847 ID=CX290847; Name=CX290847; organism=Citrus clementina; type=EST; length=672bp
GAGGATTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTC
TCTCTCCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGA
CTGAGTTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGA
AGCAGATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGG
GTGGACCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACAC
TTTGGATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAA
ATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAA
AAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAG
GAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGA
AAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTC
TGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGG
AATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGGAAGCGGTTTAA
GGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGG
GTAAAGTTCGGAAGATTGATGC
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