CX290847

Overview
NameCX290847
Unique NameCX290847
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_THICR (Adenylate kinase OS=Thiomicrospira crunogena (strain XCL-2) GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 55/183 (30.05%), Postives = 86/183 (46.99%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ-----------------------------GREDDNVETIRKRFKVFLESSLPVVQYYEAKGK 655
            LG PG+GKGTQ   + + F    +S GD+LRA IK+ +  G M +  +  GK+V  E+ I L++ +  E    + FL+DGFPR      A +A   +E + V+  D  + E+  R+  R                                REDD  E +  R KV+ E + P++ YY+A+ +
Sbjct:    6 LGAPGAGKGTQAQFLTKEFNIPQISTGDMLRAAIKAQTPMGKMAKEFMDAGKLVTDEIIIGLVKDRIAEPDCANGFLLDGFPRTVPQADALKA-AGVEIDAVIEIDVPDSEIVNRMAGRRVHPASGRTYHITYNPPKVDDKDNETGDDLIQREDDKAEVVLDRLKVYHEQTAPLIGYYKAEAE 187          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_SHEON (Adenylate kinase OS=Shewanella oneidensis GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 58/184 (31.52%), Postives = 92/184 (50.00%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKV 658
            LG PG+GKGTQ   I+E +G   +S GD+LRA +K+G+  G   + ++  G++V  ++ I L+++ + +    K FL+DGFPR      A  A   I  + V+  D  +EE+ +R+  R                   +G           R DD   T+RKR  ++ E + P+V+YY   GKV
Sbjct:    6 LGAPGAGKGTQAQFIMEQYGIPQISTGDMLRAAVKAGTPLGLEAKKVMDAGQLVSDDLIIGLVKERIAQDDCAKGFLLDGFPRTIPQADAM-AANGISIDHVIEIDVPDEEIVKRMSGRRVHPGSGRVYHVVFNPPKVEGKDDVTGEDLAIRPDDEEATVRKRLGIYHEQTKPLVEYY---GKV 185          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_SALRD (Adenylate kinase OS=Salinibacter ruber (strain DSM 13855) GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 52/185 (28.11%), Postives = 86/185 (46.49%), Query Frame = 2
Query:  200 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENR---AAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            G PG+GKGTQ   + E  G T +S GD+LR  +   +E G   ++ I  G++VP  +   L ++A+ + G+D F++DG+PR ++       F A  +   + VL     ++ + RR+  R                            R DD  ETI+ R  V+ E + P+  YYE +  +  +D
Sbjct:    7 GPPGAGKGTQAGLLEERHGITQISTGDILREAMAQETELGQKAKSYIDAGELVPDALVRDLAEQAIADEGHDDFMLDGYPRTDQQAEWLTEFLASNETPLDGVLSMKVPDDVLVRRLSRRRVHEETGETYHLDHDPPPEDVDPDLIVQRSDDEPETIQNRLDVYREETAPLATYYEERDLLVPVD 191          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_POLSJ (Adenylate kinase OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 55/183 (30.05%), Postives = 88/183 (48.09%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ-----------------------------GREDDNVETIRKRFKVFLESSLPVVQYYEAKGK 655
            LG PG+GKGTQ   I + +G   +S GD+LRA +K+G+  G   + ++  G +V  ++ I L+++ + +    K FL DGFPR      A +A   ++ ++VL  D   E +  R+  R                                REDD  ET+RKR +V+   + P+V+YY +  K
Sbjct:    6 LGAPGAGKGTQATFICQKYGIPQISTGDMLRAAVKAGTPLGVEAKKIMDAGALVSDDLIINLVKERIAQPDCAKGFLFDGFPRTIPQADAMKA-AGVKIDYVLEIDVPFEAIIERMSGRRSHTASGRTYHVKYNPPKVEGKDDVTGEPLIQREDDKEETVRKRLEVYSAQTRPLVEYYSSWAK 187          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_METFK (Adenylate kinase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 53/178 (29.78%), Postives = 87/178 (48.88%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ-----------------------------GREDDNVETIRKRFKVFLESSLPVVQYY 640
            LG PG+GKGTQ   I E F    +S GD+LRA +K+G++ G   +  +  G +VP +V I L+++ ++++     FL DGFPR      A +    ++ ++V+  D  +EE+ +R+  R                                R+DD  ET+ KR +V+   + P+V YY
Sbjct:    6 LGAPGAGKGTQATFIKEAFDIPQISTGDMLRAAVKAGTQLGLEAKRYMDSGGLVPDDVIIGLVKERIKDADCQQGFLFDGFPRTIPQAEAMKQ-AGVDIDYVVEIDVPDEEIIKRMSGRRTHLPSGRTYHVVFNPPKVAGKDDVTGEDLVQRDDDKEETVAKRLEVYHRQTKPLVDYY 182          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_MARMS (Adenylate kinase OS=Marinomonas sp. (strain MWYL1) GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 54/179 (30.17%), Postives = 91/179 (50.84%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYYE 643
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+GSE G   + ++  G++V  ++ I L+++ + ++   +  L DGFPR      A +    +E ++V+  D ++EE+ +R+  R                   +G           R DD  ET+R R  V+ + + P++ YY+
Sbjct:    6 LGAPGAGKGTQAQFITEEFGIPQISTGDMLRAAVKAGSEMGLKAKAVMDAGQLVSDDIIIGLVKERLTQDDCANGALFDGFPRTIPQADALKD-AGVEIDYVVEIDVADEEIVKRMSGRRVHEASGRTYHLVYNPPKVEGKDDVTGEDLVQRADDTEETVRLRLGVYHDQTAPLIGYYQ 183          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_ERWCT (Adenylate kinase OS=Erwinia carotovora subsp. atroseptica GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 53/179 (29.61%), Postives = 89/179 (49.72%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLL-QKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN-----------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYE 643
            LG PG+GKGTQ   I+  +G   +S GD+LRA +K+G+E G   + ++  GK+V  E+ I L+ ++  ++   + FL+DGFPR      A +    I+ ++V+ F   +E +  RI+ R                                R+DD  +T+RKR   + + + P+V YY+
Sbjct:    6 LGAPGAGKGTQAQFIMGKYGIPQISTGDMLRAAVKAGTELGKQAKEIMDAGKLVTDELVIALVKERIAQDDCRNGFLLDGFPRTIPQADAMKD-AGIDVDYVIEFAVPDELIIDRIIGRRVHAASGRVYHVKFNPPKVEDKDDVTGEDLSVRKDDQEDTVRKRLVEYHQQTAPLVSYYQ 183          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_BREBN (Adenylate kinase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 56/191 (29.32%), Postives = 90/191 (47.12%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNR------------------------NQG-----REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            +G PG+GKGTQ   IV+ F   H+S GD+ RA +K+ +  G   ++ + +G +VP EV I ++++ +      K FL+DGFPR      A  A  K    E + V+  +   E++  R+  R                          G     REDD +E + +R  V +  + P++ YY A+  +R ID
Sbjct:    6 MGLPGAGKGTQAERIVKEFDIPHISTGDMFRAAVKNETPLGLEAKSYMDKGHLVPDEVVIGIVRERLSMDDCAKGFLLDGFPRTVPQAEALTATVKELGREIDHVININVQREQLIERLTGRWICPVCGASYHTMFNPPKEAGVCDKDGGKLYQREDDKIEVVTQRLDVNIAQTQPLIDYYSAQELLRDID 196          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_BIFLO (Adenylate kinase OS=Bifidobacterium longum GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 49/158 (31.01%), Postives = 85/158 (53.80%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFE---AVTKIEPEFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKG 652
            +G  G GKGTQ A + EHF    +S GD+ R  IK+ +E G    +   +G++VP  +T K+++ +  +E   + +++DG+PRN     A +   A      + V+  + + + +  R+  R   QGR DD  E I KR + + + + P++  YEA+G
Sbjct:    6 MGPQGVGKGTQAALLAEHFNIPTISTGDIFRYNIKNKTELGLEAMSYTDKGELVPDSLTNKIVKDRLAKEDCKNGWILDGYPRNAAQVTALDEMLADLDTPLDHVVALEAARDVLLERMKKRAAEQGRADDTPEAIAKRLETYEKETAPLLDIYEARG 163          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_ALISL (Adenylate kinase OS=Aliivibrio salmonicida (strain LFI1238) GN=adk PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 56/189 (29.63%), Postives = 92/189 (48.68%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAE-IKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQG-----------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PG+GKGTQ   I++ FG   +S GD+LRA  IK+G+E G   +++I  G++V  E+ + L+++ + +    K FL+DGFPR        +    +  ++VL FD ++E +  R+  R                                REDD  ET+  R  V+ E + P++ YY  + +  K +
Sbjct:    6 LGAPGAGKGTQAQFIMDKFGIPQISTGDMLRAAIIKAGTEMGKQAKSVIDAGQLVSDEIILGLVKERIAQEDCAKGFLLDGFPRTIPQADGLKE-NGVSIDYVLEFDVADEVIVERMSGRRAHLPSGRTYHVTFNPSKVEGQDDVTGEPLVIREDDKPETVLARLGVYHEQTAPLIAYYTKEAEAGKTE 193          
The following BLAST results are available for this feature:
BLAST of CX290847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_THICR3.588e-1630.05Adenylate kinase OS=Thiomicrospira crunogena (stra... [more]
KAD_SHEON3.588e-1631.52Adenylate kinase OS=Shewanella oneidensis GN=adk P... [more]
KAD_SALRD3.588e-1628.11Adenylate kinase OS=Salinibacter ruber (strain DSM... [more]
KAD_POLSJ3.588e-1630.05Adenylate kinase OS=Polaromonas sp. (strain JS666 ... [more]
KAD_METFK3.588e-1629.78Adenylate kinase OS=Methylobacillus flagellatus (s... [more]
KAD_MARMS3.588e-1630.17Adenylate kinase OS=Marinomonas sp. (strain MWYL1)... [more]
KAD_ERWCT3.588e-1629.61Adenylate kinase OS=Erwinia carotovora subsp. atro... [more]
KAD_BREBN3.588e-1629.32Adenylate kinase OS=Brevibacillus brevis (strain 4... [more]
KAD_BIFLO3.588e-1631.01Adenylate kinase OS=Bifidobacterium longum GN=adk ... [more]
KAD_ALISL3.588e-1629.63Adenylate kinase OS=Aliivibrio salmonicida (strain... [more]

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Properties
Property NameValue
Genbank descriptionC02027G11SK IF1 Citrus clementina cDNA clone C02027G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290847 ID=CX290847; Name=CX290847; organism=Citrus clementina; type=EST; length=672bp
GAGGATTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTC
TCTCTCCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGA
CTGAGTTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGA
AGCAGATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGG
GTGGACCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACAC
TTTGGATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAA
ATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAA
AAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAG
GAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGA
AAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTC
TGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGG
AATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGGAAGCGGTTTAA
GGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGG
GTAAAGTTCGGAAGATTGATGC
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