CX290847

Overview
NameCX290847
Unique NameCX290847
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_PSEA8 (Adenylate kinase OS=Pseudomonas aeruginosa (strain LESB58) GN=adk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16
Identity = 55/179 (30.73%), Postives = 84/179 (46.93%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ-----------------------------GREDDNVETIRKRFKVFLESSLPVVQYYE 643
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+GS  G  ++ ++  G +V  ++ I L+++ + E+   K FL DGFPR      A +    +  + V+     +EE+  RI  R                                REDD  ET+R R  V+   + P+V +Y+
Sbjct:    6 LGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKD-AGVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQ 183          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_PSEA7 (Adenylate kinase OS=Pseudomonas aeruginosa (strain PA7) GN=adk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16
Identity = 55/179 (30.73%), Postives = 84/179 (46.93%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQ-----------------------------GREDDNVETIRKRFKVFLESSLPVVQYYE 643
            LG PG+GKGTQ   I E FG   +S GD+LRA +K+GS  G  ++ ++  G +V  ++ I L+++ + E+   K FL DGFPR      A +    +  + V+     +EE+  RI  R                                REDD  ET+R R  V+   + P+V +Y+
Sbjct:    6 LGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKD-AGVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEDLIQREDDKEETVRHRLSVYHSQTKPLVDFYQ 183          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_HALMA (Adenylate kinase OS=Haloarcula marismortui GN=adk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16
Identity = 55/181 (30.39%), Postives = 89/181 (49.17%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRA----EIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNR--------------NQ---------------GREDDNVETIRKRFKVFLESSLPVVQYY 640
            +G PG+GKGTQ AN+ E +G  H++ GD LRA    +I          +  ++ G +VP  V   ++ +A+ ++  D F++DG+PRN E     E +T +  + +L  D S EE+  R+  R              NQ                R+DDN E++R R  VF +++ PV+ +Y
Sbjct:    9 VGPPGAGKGTQSANLAEAYGVEHITTGDALRANKDMDISDMDTEYDTPREYMEAGDLVPDAVVNAIVDEALSQA--DGFVLDGYPRNLEQAEELEGMTAL--DVILSLDVSREELVDRLTGRRVCDDCGTNYHVEFNQPEEDGVCDECGGDLIQRDDDNEESVRNRLDVFDDNTAPVIDHY 185          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_FUSNN (Adenylate kinase OS=Fusobacterium nucleatum subsp. nucleatum GN=adk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16
Identity = 53/185 (28.65%), Postives = 92/185 (49.73%), Query Frame = 2
Query:  200 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRN-EENRAAFEAVTKI--EPEFVLFFDCSEEEMERRILNRNQG------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            G PG+GKGTQ   IV+ +G   +S GD+LR  + + ++ G   +  +  G++VP E+   L+ + + E   +K F++DGFPRN  + +   E +TK+  + E V+  +  ++++  RI  R                           R DD  E + KR + +   + PV+ YY+ + KV +ID
Sbjct:   10 GAPGAGKGTQAKFIVDKYGIPQISTGDILRVAVANKTKLGLEAKKFMDAGQLVPDEIVNGLVAERLAEKDCEKGFIMDGFPRNVAQAKVLDEILTKLGKQIEKVIALNVPDKDIIERITGRRTSKVTGKIYHIKFNPPVDEKPEDLVQRADDTEEVVVKRLETYHNQTAPVLDYYKVQNKVTEID 194          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_CLOBJ (Adenylate kinase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=adk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16
Identity = 56/191 (29.32%), Postives = 89/191 (46.60%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PG+GKGTQ   I E F   H+S GD+ RA IK  +  G   +  I  G++VP EVTI +++  + +   D  FL+DGFPR      A +   K    E +  L     EE +  R+  R                   +G           R+DD   T+++R +V+ + + P++ YY+  G + +++
Sbjct:    6 LGPPGAGKGTQAKLISEEFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFILERMTGRRVCTSCGASYHIRFNPPKIEGKCDICDNELIQRKDDTEATVKERLEVYSKQTYPLINYYKDNGIISEVN 196          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_CLOBH (Adenylate kinase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=adk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16
Identity = 56/191 (29.32%), Postives = 89/191 (46.60%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PG+GKGTQ   I E F   H+S GD+ RA IK  +  G   +  I  G++VP EVTI +++  + +   D  FL+DGFPR      A +   K    E +  L     EE +  R+  R                   +G           R+DD   T+++R +V+ + + P++ YY+  G + +++
Sbjct:    6 LGPPGAGKGTQAKLISEEFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFILERMTGRRVCTSCGASYHIRFNPPKIEGKCDICDNELIQRKDDTEATVKERLEVYSKQTYPLINYYKDNGIISEVN 196          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_CLOB1 (Adenylate kinase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=adk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16
Identity = 56/191 (29.32%), Postives = 89/191 (46.60%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PG+GKGTQ   I E F   H+S GD+ RA IK  +  G   +  I  G++VP EVTI +++  + +   D  FL+DGFPR      A +   K    E +  L     EE +  R+  R                   +G           R+DD   T+++R +V+ + + P++ YY+  G + +++
Sbjct:    6 LGPPGAGKGTQAKLISEEFSIPHISTGDIFRANIKEKTPLGIEAKRYIDNGQLVPDEVTIGIVKDRLTKDDCDNGFLLDGFPRTVAQAEALDEFLKGINKELDVALLIKVPEEFILERMTGRRVCTSCGASYHIRFNPPKIEGKCDICDNELIQRKDDTEATVKERLEVYSKQTYPLINYYKDNGIISEVN 196          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_CHLFF (Adenylate kinase OS=Chlamydophila felis (strain Fe/C-56) GN=adk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16
Identity = 56/182 (30.77%), Postives = 94/182 (51.65%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAF-EAVTKIEPEF-VLFFDCSEEEMERRI------------LNRNQG-------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKV 658
            +G PGSGKGTQ   + E  G  H+S+G+LLR+ IK+ +  G      I EG++VP+ +  +++Q+ + +S      +IDGFPR  +      + + K   ++ V+  D ++EE+ RRI             N++QG             R DD +E I+KR + +  ++  V+ YY   GK+
Sbjct:   10 MGPPGSGKGTQSQCLAEKLGLPHISSGNLLRSAIKASTPLGIKASEYIDEGQLVPNGLVWEIVQETLNKSECLSGCIIDGFPRTLDQAVLLHDFLVKANADYRVIQLDVADEEIIRRIYSRFICPSCNFVYNQSQGFRECPTCHSELVRRSDDTLEVIQKRLESYKNTTASVIDYYADLGKL 191          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_AERHH (Adenylate kinase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=adk PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16
Identity = 55/178 (30.90%), Postives = 90/178 (50.56%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTKIEPEFVLFFDCSEEEMERRILNRN------------------QG-----------REDDNVETIRKRFKVFLESSLPVVQYY 640
            LG PG+GKGTQ   I+E  G   +S GD+LRA IK+G+E G   + ++  G++V  ++ I L+++ + +    + FL+DGFPR      A +    +  +FVL FD  +EE+ +R+  R                   +G           R DD   T+RKR  V+ + + P++ +Y
Sbjct:    6 LGAPGAGKGTQAQFIMEKHGIPQISTGDMLRAAIKAGTELGLKAKAVMDAGQLVSDDIIIGLVKERIAQPDCANGFLLDGFPRTIPQAQAMKD-AGVAVDFVLEFDVPDEEIVKRMSGRRVHSGSGRTYHVVFNPPKVEGKDDVTGEDLVIRADDEETTVRKRLDVYHQQTAPLIGFY 182          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD2_XENLA (Adenylate kinase 2, mitochondrial OS=Xenopus laevis GN=ak2 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.686e-16
Identity = 56/191 (29.32%), Postives = 90/191 (47.12%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEPE---FVLFFDCSEEEMERRILNR----NQG-------------------------REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PG+GKGTQ   + E +   HL+ GD+LRA + SGSE G  ++  +  GK+V  E+ ++L++K ++     K FL+DGFPR  +     + + +   E    V+ F   +  + RRI  R    + G                         R DDN  T++ R + +   + P+V YY+  G    +D
Sbjct:   23 LGPPGAGKGTQAPKLAEKYCVCHLATGDMLRAMVASGSELGKRLKATMDAGKLVSDEMVVELIEKNLDTPPCKKGFLLDGFPRTVKQAEMLDELLEKRQEKLDSVIEFKVDDSLLVRRICGRLIHASSGRSYHEEFNPPKEPMKDDVTGEALIRRSDDNESTLKSRLEAYHTMTSPLVDYYQRHGIHTAVD 213          
The following BLAST results are available for this feature:
BLAST of CX290847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_PSEA84.686e-1630.73Adenylate kinase OS=Pseudomonas aeruginosa (strain... [more]
KAD_PSEA74.686e-1630.73Adenylate kinase OS=Pseudomonas aeruginosa (strain... [more]
KAD_HALMA4.686e-1630.39Adenylate kinase OS=Haloarcula marismortui GN=adk ... [more]
KAD_FUSNN4.686e-1628.65Adenylate kinase OS=Fusobacterium nucleatum subsp.... [more]
KAD_CLOBJ4.686e-1629.32Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_CLOBH4.686e-1629.32Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_CLOB14.686e-1629.32Adenylate kinase OS=Clostridium botulinum (strain ... [more]
KAD_CHLFF4.686e-1630.77Adenylate kinase OS=Chlamydophila felis (strain Fe... [more]
KAD_AERHH4.686e-1630.90Adenylate kinase OS=Aeromonas hydrophila subsp. hy... [more]
KAD2_XENLA4.686e-1629.32Adenylate kinase 2, mitochondrial OS=Xenopus laevi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC02027G11SK IF1 Citrus clementina cDNA clone C02027G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290847 ID=CX290847; Name=CX290847; organism=Citrus clementina; type=EST; length=672bp
GAGGATTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTC
TCTCTCCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGA
CTGAGTTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGA
AGCAGATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGG
GTGGACCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACAC
TTTGGATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAA
ATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAA
AAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAG
GAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGA
AAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTC
TGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGG
AATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGGAAGCGGTTTAA
GGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGG
GTAAAGTTCGGAAGATTGATGC
back to top