CX290847

Overview
NameCX290847
Unique NameCX290847
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_PARL1 (Adenylate kinase OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=adk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.351e-22
Identity = 60/167 (35.93%), Postives = 94/167 (56.29%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAV-----TKIEPEFVLFFDCS--EEEMERRILNRNQG-REDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PG+GKGTQ   + E  G   LS GD+LRA +  GSE G + + ++  G++VP +V + ++   +E+    + +++DGFPRN     A + +     T ++    L  D S   + +E R      G R DDN E + KR KV+ E + P++ YY+AKGK+R +D
Sbjct:    6 LGPPGAGKGTQAKRLEEAHGLVQLSTGDMLRAAVAQGSEVGKVAEGIMARGELVPDDVVVGIIADRIEQPDAVNGYILDGFPRNVAQAEALDKMLAGKGTTLDAVVELGVDDSILLKRIETRAAETAGGPRADDNAEALAKRLKVYHEQTAPLIAYYKAKGKLRTVD 172          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_CORK4 (Adenylate kinase OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=adk PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.351e-22
Identity = 64/171 (37.43%), Postives = 98/171 (57.31%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAV-----TKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYE-------AKGKVRKID 670
            LG PG+GKGTQ A + +  G  H+S GDL R  I + +E G   ++ I  GK+VP+ VT+ +++ +  ++   D FL+DGFPR  E     + +     TK++   VL FD SE+ +  R+L R  GR DD  E IR R KV+ + + P+++YY+       A+G V  I+
Sbjct:    6 LGPPGAGKGTQAAILSDKLGVPHVSTGDLFRENIGNNTELGQEAKSYIDAGKLVPTSVTVNMVKDRLSQDDAADGFLLDGFPRTVEQGDELKNILDGLGTKLDA--VLQFDVSEDVVVERMLAR--GRADDTEEVIRTRLKVYRDETAPLLEYYKDSIIRIVAEGSVEDIN 172          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_MYCA9 (Adenylate kinase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=adk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.715e-22
Identity = 59/153 (38.56%), Postives = 87/153 (56.86%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENR---AAFEAVTKIEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYE 643
            LG PG+GKGTQ   I E FG   +S GDL R+ I  G+E G   +  +  G +VPSEVT K+++  ++E      F++DGFPR  +     AA E    +  + VL F    EE+ +R+L R  GR DD  + IR R  V+ + + P+++YY+
Sbjct:    6 LGPPGAGKGTQAQLISEKFGIPQISTGDLFRSNISEGTELGLQAKQYLDAGDLVPSEVTNKMVEARLDEPDAAAGFILDGFPRTVDQADALAAMEEARGVTIDAVLEFRVPVEELVQRLLGR--GRADDTEDIIRNRLNVYRDETAPLLEYYQ 156          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_AZOPC (Adenylate kinase OS=Azobacteroides pseudotrichonymphae genomovar. CFP2 GN=adk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 5.715e-22
Identity = 59/162 (36.42%), Postives = 93/162 (57.41%), Query Frame = 2
Query:  200 GGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNRNQ--GREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKI 667
            G PGSGKGTQ   I E +    +S G++LR EIK  +E G + +  I +G+++P  +TI++L    ++  N+K ++ DGFPR      A + + K +      V      E+E+ RR+L R +   R+DDN+ETI+ R  V+ E +  V +YY  KGK+ +I
Sbjct:    8 GAPGSGKGTQSELISEKYSLYPISTGEILRREIKDKTELGKIAEEYINQGQLLPDYLTIRILVDLFDKVDNNKGYIFDGFPRTISQAKALDDLLKEQNTSIAIVFSLSVDEKELIRRLLKRGKLFSRKDDNLETIQNRLTVYREQTESVQEYYRKKGKLMEI 169          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD1_SYNY3 (Adenylate kinase 1 OS=Synechocystis sp. (strain PCC 6803) GN=adk1 PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 5.715e-22
Identity = 59/163 (36.20%), Postives = 94/163 (57.67%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAM-EESGNDKFLIDGFPRNEENRAAF--EAVTKI--EPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PGSGKGTQ   + E  G  H+S GD+LR  I  G+E G   +  + +G++VP ++ + L+++ +  +     +++DGFPRN  N+A F  E +  I     +V+     +E +  R+L R  GR DDN  TIR R  V+ E + P++ YY+ +GK+  +D
Sbjct:    8 LGAPGSGKGTQAVGLAETLGIPHISTGDMLRQAIADGTELGNQAKGYMDKGELVPDQLILGLIEERLGHKDAKAGWILDGFPRN-VNQAIFLDELLVNIGHRTHWVINLKVPDEVIVERLLAR--GRADDNETTIRNRLLVYTEQTAPLMAYYQEQGKLYSLD 167          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_WOLSU (Adenylate kinase OS=Wolinella succinogenes GN=adk PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.749e-22
Identity = 59/164 (35.98%), Postives = 91/164 (55.49%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHF--GYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDKFLIDGFPRNEENRAAFEAVTKIEPEF----VLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            +G PGSGK T    I ++      H S G+LLRAE+ SGSE G +I+    +G +VP E+ ++ +  A++ +  +  LIDG+PR+ E   A + + K E +     V+  + SE+    R+L R +G  DDN E  R R  V+L    P+  +Y AKG + KI+
Sbjct:    8 IGAPGSGKTTDAEIIAKNNPDSINHYSTGELLRAEVASGSERGKIIEGFTSKGNLVPLEIVVETIVSAIKNAPKNVVLIDGYPRSTEQMEALDKILKEESDVELTNVIEVEVSEQVACDRVLGRARG-ADDNAEVFRNRMSVYLAPLKPIQAFYTAKGILHKIN 170          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_STRAW (Adenylate kinase OS=Streptomyces avermitilis GN=adk PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.749e-22
Identity = 62/188 (32.98%), Postives = 97/188 (51.60%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEE-SGNDKFLIDGFPRNEENRAAFEAVTKIEP---EFVLFFDCSEEEMERRILNRN------------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKV 658
            +G PG+GKGTQ A + ++ G  H+S GDL RA I   +E G + ++ + EG +VP EVTI + +  ME+    + FL+DGFPRN +   A + + K E    + VL  +  E+E+ +RI  R                                 R+DD+ ET+R+R +V+   + P++ YY A+G V
Sbjct:    6 VGPPGAGKGTQAAFLAKNLGIPHISTGDLFRANISQQTELGKLAKSYMDEGNLVPDEVTIAMAKDRMEQPDAVNGFLLDGFPRNVKQAEALDEMLKSEGMKLDAVLDLEVPEDEVVKRIAGRRICRNDSAHVFHVSYKPPKQEGVCDVCGGELYQRDDDSEETVRRRLEVYHTQTEPIIDYYRAQGLV 193          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_BRAHW (Adenylate kinase OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) GN=adk PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 9.749e-22
Identity = 59/162 (36.42%), Postives = 93/162 (57.41%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQ-KAMEESGNDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRNQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            +G PG GKGTQ A I + +  +H++ GD+LR  I +G+E G   ++ + +G++VP  + I +L+ +  ++   + F++DGFPR  E       + +    +   V+    SEE +  R+L R  GR DDN ETI+ R KVF   S PV+ YY  K K+ KI+
Sbjct:    7 IGAPGVGKGTQSALIEKDYSISHIATGDMLRENIANGTELGKTAKSYMDKGELVPDSLVIDMLKDRIKKDDCKNGFMLDGFPRTIEQAKELSNILESLNYKISAVIDIFASEEIIIDRLLKR--GRADDNEETIKNRLKVFENQSKPVLDYYSDKAKIIKIE 166          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_STRMK (Adenylate kinase OS=Stenotrophomonas maltophilia (strain K279a) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.273e-21
Identity = 58/164 (35.37%), Postives = 95/164 (57.93%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESGNDK-FLIDGFPRNEENRAAFEA-VTKI-EP-EFVLFFDCSEEEMERRILNR--NQGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PGSGKGTQ   + E     H+S GD+LRAEI +G+E G   + ++  G +V  ++ + +L+  + +    K F++DG+PRN     A +  + KI +P + V+  D + E +  RI  R   QGR DD  E +R+R +V+ + + PVV +Y  +G + ++D
Sbjct:    6 LGPPGSGKGTQATRLKEKLEIAHISTGDMLRAEIAAGTELGKQAKTVMDAGNLVSDDILLGMLESRLTQPDVAKGFILDGYPRNVAQANAMDGLLAKIGQPLDAVVQLDVATELLVERIAGRAKEQGRADDTPEAVRQRLQVYNDQTAPVVDFYAGRGTLARVD 169          
BLAST of CX290847 vs. ExPASy Swiss-Prot
Match: KAD_RHIEC (Adenylate kinase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=adk PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.273e-21
Identity = 63/192 (32.81%), Postives = 99/192 (51.56%), Query Frame = 2
Query:  197 LGGPGSGKGTQCANIVEHFGYTHLSAGDLLRAEIKSGSENGTMIQNMIKEGKIVPSEVTIKLLQKAMEESG-NDKFLIDGFPRNEENRAAFEAVTK---IEPEFVLFFDCSEEEMERRILNRN------------------------------QGREDDNVETIRKRFKVFLESSLPVVQYYEAKGKVRKID 670
            LG PG+GKGTQ   IVE  G   LS GD+LRA + +G+E G   + ++  GK+V  E+ I ++ + +++    + F++DGFPR      A EA+ K   ++   V+ F   +EE+ RR+  R                               + R DDN ET+ KR +V+ + + P++ YY AKGK+R +D
Sbjct:    6 LGPPGAGKGTQAQRIVEKHGIPQLSTGDMLRAAVNAGTEVGKRAKAVMDAGKLVSDEIVIAIVSERIDQPDCANGFILDGFPRTLVQADATEAMLKAKGLDLSVVIEFRVDDEELVRRVDGRYTCAQCGTVYHDTDKVPVEEGVCDKCGSTHFKRRPDDNAETMIKRLEVYYKETSPLIGYYHAKGKLRPVD 197          
The following BLAST results are available for this feature:
BLAST of CX290847 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
KAD_PARL13.351e-2235.93Adenylate kinase OS=Parvibaculum lavamentivorans (... [more]
KAD_CORK43.351e-2237.43Adenylate kinase OS=Corynebacterium kroppenstedtii... [more]
KAD_MYCA95.715e-2238.56Adenylate kinase OS=Mycobacterium abscessus (strai... [more]
KAD_AZOPC5.715e-2236.42Adenylate kinase OS=Azobacteroides pseudotrichonym... [more]
KAD1_SYNY35.715e-2236.20Adenylate kinase 1 OS=Synechocystis sp. (strain PC... [more]
KAD_WOLSU9.749e-2235.98Adenylate kinase OS=Wolinella succinogenes GN=adk ... [more]
KAD_STRAW9.749e-2232.98Adenylate kinase OS=Streptomyces avermitilis GN=ad... [more]
KAD_BRAHW9.749e-2236.42Adenylate kinase OS=Brachyspira hyodysenteriae (st... [more]
KAD_STRMK1.273e-2135.37Adenylate kinase OS=Stenotrophomonas maltophilia (... [more]
KAD_RHIEC1.273e-2132.81Adenylate kinase OS=Rhizobium etli (strain CFN 42 ... [more]

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Properties
Property NameValue
Genbank descriptionC02027G11SK IF1 Citrus clementina cDNA clone C02027G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290847 ID=CX290847; Name=CX290847; organism=Citrus clementina; type=EST; length=672bp
GAGGATTGGCATCCCTCTGCCTTCTTTCTTTCCCTCCATATTCTTCTCTC
TCTCTCCAAACAAAACAACGCTCGCAATTCGCTAAGATCGGTTATTCAGA
CTGAGTTAGTTGGCGCTGATGGGAACTGTGGTTGAAACTCCTGTCAAGGA
AGCAGATGCTACCGTAACTGTGAAGAAGCCCACTGTTGTTTTTGTTTTGG
GTGGACCAGGCAGTGGAAAAGGAACCCAGTGCGCAAACATTGTTGAACAC
TTTGGATACACCCATCTCAGTGCTGGTGATCTTCTCAGAGCCGAAATCAA
ATCTGGCTCTGAAAATGGAACCATGATTCAGAACATGATTAAAGAGGGAA
AAATCGTTCCTTCAGAGGTCACAATTAAGCTTCTCCAAAAAGCAATGGAG
GAAAGTGGAAATGATAAATTTCTCATCGATGGTTTTCCCAGAAACGAGGA
AAATCGTGCTGCATTTGAAGCTGTTACCAAAATTGAGCCAGAATTCGTTC
TGTTTTTTGACTGTTCTGAGGAGGAGATGGAGAGGCGCATTTTGAATAGG
AATCAGGGAAGAGAAGATGATAACGTTGAGACAATTAGGAAGCGGTTTAA
GGTTTTCTTAGAATCTAGTCTCCCTGTGGTTCAATATTATGAAGCTAAGG
GTAAAGTTCGGAAGATTGATGC
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