CX290879

Overview
NameCX290879
Unique NameCX290879
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length553
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7096 contig Ccv1_Contig7096:7..557. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1A1_PIG (Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR1A1 PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 5.484e-17
Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = 1 
Query:   85 TGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            TG+ +PL+G GT +    +  K  + +A+ +GYRH D AA Y +E  +GEALTE +  G     +ELF+TSKLW T  +   V P L+K   D
Sbjct:   10 TGQKMPLIGLGTWKSEPGQV-KAAIKYALTVGYRHIDCAAIYGNELEIGEALTETVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLAD 101

HSP 2 Score: 34.2686 bits (77), Expect = 5.484e-17
Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 2 
Query:  341 AYKKTLKTLGLEYLDLYLVHFP 406
            A +KTL  L LEYLDLYL+H+P
Sbjct:   94 ALRKTLADLQLEYLDLYLMHWP 115
[Close]
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1A1_MOUSE (Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=Akr1a1 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 5.484e-17
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 1 
Query:   85 TGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            TG+ +PL+G GT +    +  K  + HA+  GYRH D A+ Y +E  +GEAL E++  G     +ELF+TSKLW T  +   V P L+K   D
Sbjct:   10 TGQKMPLIGLGTWKSEPGQV-KAAIKHALSAGYRHIDCASVYGNETEIGEALKESVGSGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLAD 101

HSP 2 Score: 34.2686 bits (77), Expect = 5.484e-17
Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 2 
Query:  341 AYKKTLKTLGLEYLDLYLVHFP 406
            A +KTL  L LEYLDLYL+H+P
Sbjct:   94 ALRKTLADLQLEYLDLYLMHWP 115
[Close]
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: DDBX_BOVIN (Dihydrodiol dehydrogenase 3 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 7.130e-17
Identity = 36/92 (39.13%), Postives = 54/92 (58.70%), Query Frame = 1 
Query:   88 GKSIPLVGFGTV---EYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKN 354
            G  IP++GFGT    E P +EA  E    AI+ G+RH D+A  Y +E+ +G+A+   +  G V+  +++F TSKLW T      V P L+K+
Sbjct:   13 GHFIPVLGFGTFAPREVPKSEAL-EVTKFAIEAGFRHIDSAHLYQNEEQVGQAIRSKIADGTVKR-EDIFYTSKLWSTSLRPELVRPALEKS 102

HSP 2 Score: 47.3654 bits (111), Expect = 7.130e-17
Identity = 26/64 (40.62%), Postives = 37/64 (57.81%), Query Frame = 2 
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED----IRSFDYEGVWEEMEKCQELGPTK 520
            A +K+L  L L+Y+DLY++HFPV+L    T     E+      S D    WE +EKC++ G TK
Sbjct:   98 ALEKSLNNLQLDYVDLYIIHFPVALKPGETLFPTDENGKPIFDSVDLCRTWEALEKCKDAGLTK 161
[Close]
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1A1_PONAB (Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 9.267e-17
Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 1 
Query:   85 TGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            TG+ +PL+G GT +    +  K  V +A+ +GYRH D AA Y +E  +GEAL E +  G     +ELF+TSKLW T  +   V P LQK   D
Sbjct:   10 TGQKMPLIGLGTWKSEPGQV-KAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALQKTLAD 101

HSP 2 Score: 33.8834 bits (76), Expect = 9.267e-17
Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 2 
Query:  341 AYKKTLKTLGLEYLDLYLVHFP 406
            A +KTL  L LEYLDLYL+H+P
Sbjct:   94 ALQKTLADLQLEYLDLYLMHWP 115
[Close]
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: PGFS2_BOVIN (Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 9.269e-17
Identity = 36/95 (37.89%), Postives = 56/95 (58.95%), Query Frame = 1 
Query:   88 GKSIPLVGFGTV---EYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            G  IP++GFGT    E P +EA  E    AI++G+RH D+A  Y +E+ +G+A+   +  G V+  +++F TSKLW        V P L+K+ Q+
Sbjct:   13 GHFIPVLGFGTYAPEEVPKSEAL-EATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVKR-EDIFYTSKLWCNSLQPELVRPALEKSLQN 105

HSP 2 Score: 45.4394 bits (106), Expect = 9.269e-17
Identity = 26/64 (40.62%), Postives = 36/64 (56.25%), Query Frame = 2 
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED----IRSFDYEGVWEEMEKCQELGPTK 520
            A +K+L+ L L+Y+DLY++H PVSL        K E       S D    WE +EKC++ G TK
Sbjct:   98 ALEKSLQNLQLDYVDLYIIHSPVSLKPGNKFVPKDESGKLIFDSVDLCHTWEALEKCKDAGLTK 161
[Close]
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: PGFS1_BOVIN (Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3)

HSP 1 Score: 60.4622 bits (145), Expect = 9.269e-17
Identity = 36/95 (37.89%), Postives = 56/95 (58.95%), Query Frame = 1 
Query:   88 GKSIPLVGFGTV---EYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            G  IP++GFGT    E P +EA  E    AI++G+RH D+A  Y +E+ +G+A+   +  G V+  +++F TSKLW        V P L+K+ Q+
Sbjct:   13 GHFIPVLGFGTYAPEEVPKSEAL-EATKFAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVKR-EDIFYTSKLWCNSLQPELVRPALEKSLQN 105

HSP 2 Score: 45.4394 bits (106), Expect = 9.269e-17
Identity = 26/64 (40.62%), Postives = 36/64 (56.25%), Query Frame = 2 
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED----IRSFDYEGVWEEMEKCQELGPTK 520
            A +K+L+ L L+Y+DLY++H PVSL        K E       S D    WE +EKC++ G TK
Sbjct:   98 ALEKSLQNLQLDYVDLYIIHSPVSLKPGNKFVPKDESGKLIFDSVDLCHTWEALEKCKDAGLTK 161
[Close]
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1A1_BOVIN (Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.566e-16
Identity = 38/93 (40.86%), Postives = 55/93 (59.14%), Query Frame = 1 
Query:   85 TGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            TG+ +PL+G GT +    +  K  + +A+ +GYRH D AA Y +E  +GEAL E +  G +   +ELF+TSKLW T  +   V P L+K   D
Sbjct:   10 TGQKMPLIGLGTWKSDPGQV-KAAIKYALSVGYRHIDCAAIYGNETEIGEALKENVGPGKLVPREELFVTSKLWNTKHHPEDVEPALRKTLAD 101

HSP 2 Score: 34.6538 bits (78), Expect = 1.566e-16
Identity = 20/55 (36.36%), Postives = 30/55 (54.55%), Query Frame = 2 
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLIL-EATCPVKPEDIRSFD---YEGVWEEME 493
            A +KTL  L LEYLDLYL+H+P +    ++  P   +    +D   Y+  W  +E
Sbjct:   94 ALRKTLADLQLEYLDLYLMHWPYAFERGDSPFPKNADGTIRYDSTHYKETWRALE 148
[Close]
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1A1_XENLA (Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN=akr1a1 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.566e-16
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 1 
Query:   49 MRTAIPEEPLGSTGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            M T++  E L  TG+ +PL+G GT +    +  K+ V +A+ +GYRH D A  Y +E  +GEA+ E++        +E+F+TSKLW    +   V   L+K  Q+
Sbjct:    1 MATSVEYETL-YTGQKMPLIGLGTWKSAPGQV-KDAVKYALGVGYRHIDCAFVYGNETEVGEAIKESVGPDKGLKREEVFVTSKLWNNKHHPDDVECALRKTLQE 103

HSP 2 Score: 43.8986 bits (102), Expect = 1.566e-16
Identity = 25/64 (39.06%), Postives = 36/64 (56.25%), Query Frame = 2 
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLIL-EATCPVKPEDIRSF---DYEGVWEEMEKCQELGPTK 520
            A +KTL+ L L+YLDLYL+H+P +    +   P  P+    +   DY+  W+ MEK  E G  K
Sbjct:   96 ALRKTLQELQLDYLDLYLMHWPYAFKRGDQVFPQNPDGSVQYDLTDYKDTWKAMEKLVEKGLAK 159
[Close]
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: ALDR_ENCCU (Aldose reductase OS=Encephalitozoon cuniculi GN=ECU01_0970 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.569e-16
Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = 1 
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            + GK IP VG GT         +  + +A+ LGYRH DTA  Y +E+ +G  L +    G+VQ  D LFITSKLW  +++ G    GL+++  D
Sbjct:    9 NNGKEIPTVGLGTWGMEDEAVLEGAIRNALSLGYRHIDTAFIYGNEKMIGNILKKLFDEGVVQRKD-LFITSKLW--NTFHGCPEDGLRRSLND 99

HSP 2 Score: 42.3578 bits (98), Expect = 1.569e-16
Identity = 22/62 (35.48%), Postives = 36/62 (58.06%), Query Frame = 2 
Query:  347 KKTLKTLGLEYLDLYLVHFPVSLILEATCPV----KPEDIRSFDYEGVWEEMEKCQELGPTK 520
            +++L  L ++Y+DLYL+H+PV+        V    K  ++  FD  GVW++ME   +LG  K
Sbjct:   94 RRSLNDLQMDYVDLYLIHWPVTFDPAPDGTVESCGKKYNVGKFDAVGVWKKMEALVDLGLAK 155
[Close]
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1A1_HUMAN (Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=AKR1A1 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 2.035e-16
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = 1 
Query:   85 TGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            TG+ +PL+G GT +    +  K  V +A+ +GYRH D AA Y +E  +GEAL E +  G     +ELF+TSKLW T  +   V P L+K   D
Sbjct:   10 TGQKMPLIGLGTWKSEPGQV-KAAVKYALSVGYRHIDCAAIYGNEPEIGEALKEDVGPGKAVPREELFVTSKLWNTKHHPEDVEPALRKTLAD 101

HSP 2 Score: 34.2686 bits (77), Expect = 2.035e-16
Identity = 15/22 (68.18%), Postives = 18/22 (81.82%), Query Frame = 2 
Query:  341 AYKKTLKTLGLEYLDLYLVHFP 406
            A +KTL  L LEYLDLYL+H+P
Sbjct:   94 ALRKTLADLQLEYLDLYLMHWP 115
The following BLAST results are available for this feature:
BLAST of CX290879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
AK1A1_PIG5.484e-1741.94Alcohol dehydrogenase [NADP+] OS=Sus scrofa GN=AKR... [more]
AK1A1_MOUSE5.484e-1740.86Alcohol dehydrogenase [NADP+] OS=Mus musculus GN=A... [more]
DDBX_BOVIN7.130e-1739.13Dihydrodiol dehydrogenase 3 OS=Bos taurus PE=2 SV=... [more]
AK1A1_PONAB9.267e-1743.01Alcohol dehydrogenase [NADP+] OS=Pongo abelii GN=A... [more]
PGFS2_BOVIN9.269e-1737.89Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1[more]
PGFS1_BOVIN9.269e-1737.89Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3[more]
AK1A1_BOVIN1.566e-1640.86Alcohol dehydrogenase [NADP+] OS=Bos taurus GN=AKR... [more]
AK1A1_XENLA1.566e-1635.24Alcohol dehydrogenase [NADP+] OS=Xenopus laevis GN... [more]
ALDR_ENCCU1.569e-1639.36Aldose reductase OS=Encephalitozoon cuniculi GN=EC... [more]
AK1A1_HUMAN2.035e-1641.94Alcohol dehydrogenase [NADP+] OS=Homo sapiens GN=A... [more]

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Properties
Property NameValue
Genbank descriptionC03001C03Rv OF1 Citrus clementina cDNA clone C03001C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290879 ID=CX290879; Name=CX290879; organism=Citrus clementina; type=EST; length=553bp
TGGAATCATTGTGGTAATTTAGCTAGGCAAATACTGGATAGGAGGAAAAT
GAGGACGGCCATTCCAGAAGAACCCTTGGGCTCAACAGGGAAATCGATTC
CTCTTGTAGGCTTTGGAACCGTTGAATATCCATTGAATGAAGCCTTTAAA
GAACGCGTTCTGCATGCAATTAAGCTGGGGTATAGACACTTTGATACTGC
TGCAGCTTACCCATCCGAGCAACCTCTTGGCGAAGCATTAACTGAAGCTT
TACGTCTTGGCCTCGTTCAATCCGGCGACGAGCTTTTCATCACCTCAAAA
CTCTGGCTCACCGACTCCTATCGCGGCCGTGTCATCCCGGGCCTACAAAA
AAACTCTCAAGACTCTTGGATTGGAGTACCTTGATCTCTATCTAGTTCAT
TTTCCGGTAAGCTTGATTCTAGAGGCGACGTGTCCTGTGAAACCGGAGGA
TATTCGTTCATTTGACTATGAGGGTGTTTGGGAGGAAATGGAGAAATGTC
AAGAGCTAGGTCCTACAAAAAAAAAAAGGAGTAAGTAACTTTACATGCAA
GAA
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