CX290879

Overview
NameCX290879
Unique NameCX290879
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length553
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7096 contig Ccv1_Contig7096:7..557. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1CL_MOUSE (Aldo-keto reductase family 1 member C21 OS=Mus musculus GN=Akr1c21 PE=1 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 1.658e-15
Identity = 35/94 (37.23%), Postives = 56/94 (59.57%), Query Frame = 1
Query:   88 GKSIPLVGFGT---VEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQ 360
            G  IP++GFGT   +E P ++A KE    AI  G+ HFD+A+ Y +E  +GEA+   +  G V+  +++F TSK+W T  +   V   L+++ Q
Sbjct:   13 GNFIPVLGFGTALPLECPKSKA-KELTKIAIDAGFHHFDSASVYNTEDHVGEAIRSKIADGTVRR-EDIFYTSKVWCTSLHPELVRASLERSLQ 104          

HSP 2 Score: 43.5134 bits (101), Expect = 1.658e-15
Identity = 24/62 (38.71%), Postives = 36/62 (58.06%), Query Frame = 2
Query:  347 KKTLKTLGLEYLDLYLVHFPVSLIL-EATCPVKPEDIRSFDYE---GVWEEMEKCQELGPTK 520
            +++L+ L  +Y+DLYL+H+P++L   E   PV       FD       WE MEKC++ G TK
Sbjct:  100 ERSLQKLQFDYVDLYLIHYPMALKPGEENFPVDEHGKLIFDRVDLCATWEAMEKCKDAGLTK 161          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: XYL1_CANPA (NADH-dependent D-xylose reductase OS=Candida parapsilosis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.800e-15
Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = 1
Query:   55 TAIPEEPLGSTGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            TA P   L S G  IPLVGFG  +   N+   +++  AIK GYR FD A  Y +EQ +GE +  A++ G+V+  +ELFITSKLW +   +  V   L K   D
Sbjct:    5 TASPAVKLNS-GYEIPLVGFGCWKLT-NDVASDQIYRAIKSGYRLFDGAEDYANEQEVGEGIKRAIKEGIVKR-EELFITSKLWNSFHDKKNVEVALMKTLSD 104          

HSP 2 Score: 32.7278 bits (73), Expect = 2.800e-15
Identity = 12/24 (50.00%), Postives = 18/24 (75.00%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVS 412
            A  KTL  L L+Y+DL+ +HFP++
Sbjct:   97 ALMKTLSDLNLDYVDLFYIHFPIA 120          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: ALDR_RABIT (Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B1 PE=2 SV=3)

HSP 1 Score: 61.6178 bits (148), Expect = 2.802e-15
Identity = 38/92 (41.30%), Postives = 50/92 (54.35%), Query Frame = 1
Query:   88 GKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            G  +P++G GT + P  +   E V  AI LGYRH D A  Y +E  +G AL E L+  +V+  +ELFI SKLW T   +  V    QK   D
Sbjct:   10 GAKMPILGLGTWKSPPGQV-TEAVKTAIDLGYRHIDCAHVYQNENEVGVALQEKLKEQVVKR-EELFIVSKLWCTSHDKSLVKGACQKTLND 99          

HSP 2 Score: 39.2762 bits (90), Expect = 2.802e-15
Identity = 26/67 (38.81%), Postives = 33/67 (49.25%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVS-------LILEATCPVKPEDIRSFDYEGVWEEMEKCQELGPTK 520
            A +KTL  L L+YLDLYL+H+P           L+A   V P D    D+   WE ME   + G  K
Sbjct:   92 ACQKTLNDLKLDYLDLYLIHWPTGFKHGSEYFPLDAAGNVIPSDT---DFLDTWEAMEGLVDEGLVK 155          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: ALDR_MOUSE (Aldose reductase OS=Mus musculus GN=Akr1b1 PE=1 SV=3)

HSP 1 Score: 59.6918 bits (143), Expect = 3.641e-15
Identity = 38/94 (40.43%), Postives = 50/94 (53.19%), Query Frame = 1
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            + G  +P +G GT + P  +   E V  AI LGYRH D A  Y +E+ +G AL E L+  +V+  D LFI SKLW T   +  V    QK   D
Sbjct:    8 NNGTKMPTLGLGTWKSPPGQV-TEAVKVAIDLGYRHIDCAQVYQNEKEVGVALQEKLKEQVVKRQD-LFIVSKLWCTFHDKSMVKGAFQKTLSD 99          

HSP 2 Score: 40.817 bits (94), Expect = 3.641e-15
Identity = 25/67 (37.31%), Postives = 35/67 (52.24%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVS-------LILEATCPVKPEDIRSFDYEGVWEEMEKCQELGPTK 520
            A++KTL  L L+YLDLYL+H+P           L+A+  V P D    D+   W  ME+  + G  K
Sbjct:   92 AFQKTLSDLQLDYLDLYLIHWPTGFKPGPDYFPLDASGNVIPSDT---DFVDTWTAMEQLVDEGLVK 155          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: YPR1_YEAST (Putative reductase 1 OS=Saccharomyces cerevisiae GN=YPR1 PE=1 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 3.643e-15
Identity = 33/78 (42.31%), Postives = 51/78 (65.38%), Query Frame = 1
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTD 315
            +TG SIP++GFGT     N  +   V+ A+K GYRH D AA Y +E+ +G A+ ++   G+ +  +E+FIT+KLW T+
Sbjct:   15 NTGASIPVLGFGTWRSVDNNGYHS-VIAALKAGYRHIDAAAIYLNEEEVGRAIKDS---GVPR--EEIFITTKLWGTE 86          

HSP 2 Score: 41.2022 bits (95), Expect = 3.643e-15
Identity = 24/72 (33.33%), Postives = 38/72 (52.78%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSL----ILEATCPVKPE--------DIRSFDYEGVWEEMEKCQELGPTK 520
            A  K+LK LGL+Y+DLYL+H+PV L    + +      P         D + +++   WE M++  + G TK
Sbjct:   93 ALNKSLKRLGLDYVDLYLMHWPVPLKTDRVTDGNVLCIPTLEDGTVDIDTKEWNFIKTWELMQELPKTGKTK 164          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1CN_HORSE (Aldo-keto reductase family 1 member C23 OS=Equus caballus GN=AKR1C23 PE=1 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 4.729e-15
Identity = 34/93 (36.56%), Postives = 50/93 (53.76%), Query Frame = 1
Query:   88 GKSIPLVGFGTVEYPLNEAFKERVLHAIK----LGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKN 354
            G  I  +GFGT  Y  NE  K + + A K     G+RH D A  Y +E+ +G A+   ++ G V+  +++F TSKLW T      V P L+K+
Sbjct:   13 GHFIHALGFGT--YAPNEVPKSKAVEATKSAIDAGFRHIDCAHLYDNEKEVGLAIRSKIQDGTVKR-EDIFCTSKLWATSLRLQLVRPALEKS 102          

HSP 2 Score: 48.1358 bits (113), Expect = 4.729e-15
Identity = 27/64 (42.19%), Postives = 38/64 (59.38%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLIL-EATCPVKPEDIRSFDYE---GVWEEMEKCQELGPTK 520
            A +K+LK L L+Y+DLY++HFPV++   E   P   +    FD       WE MEKC++ G TK
Sbjct:   98 ALEKSLKNLQLDYVDLYIIHFPVAVKPGEEHLPQDEQGRMIFDTVDLCATWEAMEKCKDAGLTK 161          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1C2_HUMAN (Aldo-keto reductase family 1 member C2 OS=Homo sapiens GN=AKR1C2 PE=1 SV=3)

HSP 1 Score: 51.9878 bits (123), Expect = 4.729e-15
Identity = 34/94 (36.17%), Postives = 56/94 (59.57%), Query Frame = 1
Query:   88 GKSIPLVGFGTVEYPLNEAFKERVLHAIKL----GYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVI-PGLQKN 354
            G  +P++GFGT  Y   E  K + L A+KL    G+ H D+A  Y +E+ +G A+   +  G V+  D +F TSKLW ++S+R  ++ P L+++
Sbjct:   13 GHFMPVLGFGT--YAPAEVPKSKALEAVKLAIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVKRED-IFYTSKLW-SNSHRPELVRPALERS 102          

HSP 2 Score: 48.1358 bits (113), Expect = 4.729e-15
Identity = 26/64 (40.62%), Postives = 37/64 (57.81%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED----IRSFDYEGVWEEMEKCQELGPTK 520
            A +++LK L L+Y+DLYL+HFPVS+        K E+      + D    WE MEKC++ G  K
Sbjct:   98 ALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAK 161          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1BA_HUMAN (Aldo-keto reductase family 1 member B10 OS=Homo sapiens GN=AKR1B10 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 4.731e-15
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 1
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            ST   +P+VG GT + PL +  KE V  AI  GYRH D A  Y +E  +GEA+ E ++   V+  ++LFI SKLW T   R  V    +K  +D
Sbjct:    8 STKAKMPIVGLGTWKSPLGKV-KEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKR-EDLFIVSKLWPTFFERPLVRKAFEKTLKD 99          

HSP 2 Score: 37.3502 bits (85), Expect = 4.731e-15
Identity = 23/67 (34.33%), Postives = 36/67 (53.73%), Query Frame = 2
Query:  338 RAYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPEDIRSFDYEG------VWEEMEKCQELGPTK 520
            +A++KTLK L L YLD+YL+H+P     ++   + P+D +     G       WE ME+  + G  K
Sbjct:   91 KAFEKTLKDLKLSYLDVYLIHWPQG--FKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVK 155          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AKC1H_MOUSE (Aldo-keto reductase family 1 member C18 OS=Mus musculus GN=Akr1c18 PE=2 SV=2)

HSP 1 Score: 54.299 bits (129), Expect = 6.145e-15
Identity = 32/93 (34.41%), Postives = 52/93 (55.91%), Query Frame = 1
Query:   88 GKSIPLVGFGTVEYPLNEAFKERVLH----AIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKN 354
            G SIP++GFGT  Y   E  K++ +     AI +G+ H D +  Y +E+ +G+A+   +  G V+  +++F TSKLW T      V P L+ +
Sbjct:   13 GHSIPVLGFGT--YATEEHLKKKSMESTKIAIDVGFCHIDCSHLYQNEEEIGQAILSKIEDGTVKR-EDIFYTSKLWSTSHRPELVRPSLENS 102          

HSP 2 Score: 45.4394 bits (106), Expect = 6.145e-15
Identity = 25/64 (39.06%), Postives = 37/64 (57.81%), Query Frame = 2
Query:  347 KKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED------IRSFDYEGVWEEMEKCQELGPTK 520
            + +L+ L L+Y+DLYL+HFPVS  L+    + P+D        + D    WE MEKC++ G  K
Sbjct:  100 ENSLRKLNLDYVDLYLIHFPVS--LKPGNELLPKDEHGNLIFDTVDLCDTWEAMEKCKDAGLAK 161          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1C1_PONAB (Aldo-keto reductase family 1 member C1 homolog OS=Pongo abelii GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 6.145e-15
Identity = 32/90 (35.56%), Postives = 50/90 (55.56%), Query Frame = 1
Query:   97 IPLVGFGTVEYPLNEAFKERVLHAIKL----GYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKN 354
            +P++GFGT   P  E  K + L A KL    G+RH D+A  Y +E+ +G A+   +  G V+  +++F TSKLW        V P L+++
Sbjct:   16 MPVLGFGTYAPP--EVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKR-EDIFYTSKLWCNSHRPELVRPALERS 102          

HSP 2 Score: 48.521 bits (114), Expect = 6.145e-15
Identity = 27/64 (42.19%), Postives = 37/64 (57.81%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED----IRSFDYEGVWEEMEKCQELGPTK 520
            A +++LK L L+Y+DLYLVHFPVS+        K E+      + D    WE MEKC++ G  K
Sbjct:   98 ALERSLKNLQLDYVDLYLVHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAK 161          
The following BLAST results are available for this feature:
BLAST of CX290879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
AK1CL_MOUSE1.658e-1537.23Aldo-keto reductase family 1 member C21 OS=Mus mus... [more]
XYL1_CANPA2.800e-1542.72NADH-dependent D-xylose reductase OS=Candida parap... [more]
ALDR_RABIT2.802e-1541.30Aldose reductase OS=Oryctolagus cuniculus GN=AKR1B... [more]
ALDR_MOUSE3.641e-1540.43Aldose reductase OS=Mus musculus GN=Akr1b1 PE=1 SV... [more]
YPR1_YEAST3.643e-1542.31Putative reductase 1 OS=Saccharomyces cerevisiae G... [more]
AK1CN_HORSE4.729e-1536.56Aldo-keto reductase family 1 member C23 OS=Equus c... [more]
AK1C2_HUMAN4.729e-1536.17Aldo-keto reductase family 1 member C2 OS=Homo sap... [more]
AK1BA_HUMAN4.731e-1541.49Aldo-keto reductase family 1 member B10 OS=Homo sa... [more]
AKC1H_MOUSE6.145e-1534.41Aldo-keto reductase family 1 member C18 OS=Mus mus... [more]
AK1C1_PONAB6.145e-1535.56Aldo-keto reductase family 1 member C1 homolog OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03001C03Rv OF1 Citrus clementina cDNA clone C03001C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290879 ID=CX290879; Name=CX290879; organism=Citrus clementina; type=EST; length=553bp
TGGAATCATTGTGGTAATTTAGCTAGGCAAATACTGGATAGGAGGAAAAT
GAGGACGGCCATTCCAGAAGAACCCTTGGGCTCAACAGGGAAATCGATTC
CTCTTGTAGGCTTTGGAACCGTTGAATATCCATTGAATGAAGCCTTTAAA
GAACGCGTTCTGCATGCAATTAAGCTGGGGTATAGACACTTTGATACTGC
TGCAGCTTACCCATCCGAGCAACCTCTTGGCGAAGCATTAACTGAAGCTT
TACGTCTTGGCCTCGTTCAATCCGGCGACGAGCTTTTCATCACCTCAAAA
CTCTGGCTCACCGACTCCTATCGCGGCCGTGTCATCCCGGGCCTACAAAA
AAACTCTCAAGACTCTTGGATTGGAGTACCTTGATCTCTATCTAGTTCAT
TTTCCGGTAAGCTTGATTCTAGAGGCGACGTGTCCTGTGAAACCGGAGGA
TATTCGTTCATTTGACTATGAGGGTGTTTGGGAGGAAATGGAGAAATGTC
AAGAGCTAGGTCCTACAAAAAAAAAAAGGAGTAAGTAACTTTACATGCAA
GAA
back to top