CX290879

Overview
NameCX290879
Unique NameCX290879
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length553
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: ALD2_MOUSE (Aldose reductase-related protein 2 OS=Mus musculus GN=Akr1b8 PE=1 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 6.148e-15
Identity = 40/94 (42.55%), Postives = 53/94 (56.38%), Query Frame = 1
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            ST   +P+VG GT + P N+  KE V  AI  GYRH D A AY +E  +GEA+ E ++   VQ  ++LFI SKLW T   +  +    QK   D
Sbjct:    8 STKAKMPIVGLGTWKSPPNQV-KEAVKAAIDAGYRHIDCAYAYCNENEVGEAIQEKIKEKAVQR-EDLFIVSKLWPTCFEKKLLKEAFQKTLTD 99          

HSP 2 Score: 35.8094 bits (81), Expect = 6.148e-15
Identity = 15/25 (60.00%), Postives = 20/25 (80.00%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSL 415
            A++KTL  L L+YLDLYL+H+P  L
Sbjct:   92 AFQKTLTDLKLDYLDLYLIHWPQGL 116          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFA (Aldo-keto reductase family 1 member C4 OS=Macaca fascicularis GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 7.985e-15
Identity = 33/93 (35.48%), Postives = 51/93 (54.84%), Query Frame = 1
Query:   88 GKSIPLVGFGTVEYPLNEAFKERVLHAIKL----GYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKN 354
            G  +P++GFGT   P  E  + RV+   KL    G+RH D+A  Y +E+ +G A+   +  G V+  +++F TSKLW T      V P L+ +
Sbjct:   13 GHFMPVLGFGTYAPP--EVPRNRVVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKR-EDIFYTSKLWCTFFRPQLVQPALESS 102          

HSP 2 Score: 48.521 bits (114), Expect = 7.985e-15
Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED----IRSFDYEGVWEEMEKCQELGPTK 520
            A + +LK L L+Y+DLYL+HFP++L    T   K E+      + D   +WE MEKC++ G  K
Sbjct:   98 ALESSLKKLQLDYVDLYLIHFPMALKPGETPLPKDENGKVMFDTVDLCAIWEAMEKCKDAGLAK 161          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1CL_RAT (Aldo-keto reductase family 1 member C21 OS=Rattus norvegicus GN=Akr1c21 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 7.989e-15
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 1
Query:   88 GKSIPLVGFGTV---EYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLT 312
            G  IP++GFGT    E P ++A KE    AI  G+ HFD+A  Y +E  +GEA+ E +  G  +  +++F TSKLW T
Sbjct:   13 GHFIPVLGFGTAMPSELPKSKA-KEVTKIAIDAGFHHFDSAFVYNTEDHVGEAIREKIANGTTRR-EDIFYTSKLWCT 88          

HSP 2 Score: 43.5134 bits (101), Expect = 7.989e-15
Identity = 25/60 (41.67%), Postives = 34/60 (56.67%), Query Frame = 2
Query:  353 TLKTLGLEYLDLYLVHFPVSLIL-EATCPVKPEDIRSFDYE---GVWEEMEKCQELGPTK 520
            +LK L L+Y+DLYL+HFP++L   +   PV       FD       WE MEKC++ G  K
Sbjct:  102 SLKKLQLDYVDLYLIHFPMALKPGDENFPVDEHGKLLFDTVDLCATWEAMEKCKDAGLAK 161          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1C1_HUMAN (Aldo-keto reductase family 1 member C1 OS=Homo sapiens GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 1.038e-14
Identity = 32/92 (34.78%), Postives = 53/92 (57.61%), Query Frame = 1
Query:   88 GKSIPLVGFGT---VEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKN 354
            G  +P++GFGT    E P ++A +   L AI+ G+RH D+A  Y +E+ +G A+   +  G V+  +++F TSKLW        V P L+++
Sbjct:   13 GHFMPVLGFGTYAPAEVPKSKALEATKL-AIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKR-EDIFYTSKLWCNSHRPELVRPALERS 102          

HSP 2 Score: 46.595 bits (109), Expect = 1.038e-14
Identity = 25/64 (39.06%), Postives = 37/64 (57.81%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED----IRSFDYEGVWEEMEKCQELGPTK 520
            A +++LK L L+Y+DLYL+HFPVS+        K E+      + D    WE +EKC++ G  K
Sbjct:   98 ALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAVEKCKDAGLAK 161          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: ALDR_HUMAN (Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV=3)

HSP 1 Score: 62.3882 bits (150), Expect = 1.038e-14
Identity = 38/94 (40.43%), Postives = 52/94 (55.32%), Query Frame = 1
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            + G  +P++G GT + P  +   E V  AI +GYRH D A  Y +E  +G A+ E LR  +V+  +ELFI SKLW T   +G V    QK   D
Sbjct:    8 NNGAKMPILGLGTWKSPPGQV-TEAVKVAIDVGYRHIDCAHVYQNENEVGVAIQEKLREQVVKR-EELFIVSKLWCTYHEKGLVKGACQKTLSD 99          

HSP 2 Score: 36.5798 bits (83), Expect = 1.038e-14
Identity = 24/67 (35.82%), Postives = 32/67 (47.76%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVS-------LILEATCPVKPEDIRSFDYEGVWEEMEKCQELGPTK 520
            A +KTL  L L+YLDLYL+H+P           L+ +  V P D    D    W  ME+  + G  K
Sbjct:   92 ACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILD---TWAAMEELVDEGLVK 155          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: DIDH_RAT (3-alpha-hydroxysteroid dehydrogenase OS=Rattus norvegicus GN=Akr1c9 PE=1 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 1.282e-14
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 1
Query:   88 GKSIPLVGFGTVEYPLNEAFKERVLHAIKL----GYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLT 312
            G  IP++GFGT      +  K+ V+ A K+    G+RHFD+A  Y  E+ +G+A+   +  G V+  +++F TSKLW T
Sbjct:   13 GNFIPVLGFGTTVP--EKVAKDEVIKATKIAIDNGFRHFDSAYLYEVEEEVGQAIRSKIEDGTVKR-EDIFYTSKLWST 88          

HSP 2 Score: 44.669 bits (104), Expect = 1.282e-14
Identity = 25/70 (35.71%), Postives = 37/70 (52.86%), Query Frame = 2
Query:  347 KKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPEDI------------RSFDYEGVWEEMEKCQELGPTK 520
            +KTLK+  L+Y+DLY++HFP++L        +P DI             + D    WE MEKC++ G  K
Sbjct:  100 EKTLKSTQLDYVDLYIIHFPMAL--------QPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAK 161          

HSP 3 Score: 20.7866 bits (42), Expect = 1.282e-14
Identity = 8/13 (61.54%), Postives = 9/13 (69.23%), Query Frame = 3
Query:  513 LQKKKGVSNFTCK 551
            L K  GVSNF C+
Sbjct:  159 LAKSIGVSNFNCR 171          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1C4_MACFU (Aldo-keto reductase family 1 member C4 OS=Macaca fuscata fuscata GN=AKR1C4 PE=1 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 2.276e-14
Identity = 32/93 (34.41%), Postives = 51/93 (54.84%), Query Frame = 1
Query:   88 GKSIPLVGFGTVEYPLNEAFKERVLHAIKL----GYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKN 354
            G  +P++GFG+   P  E  + RV+   KL    G+RH D+A  Y +E+ +G A+   +  G V+  +++F TSKLW T      V P L+ +
Sbjct:   13 GHFMPVLGFGSYAPP--EVPRNRVVEVTKLAIEAGFRHIDSAYLYNNEEQVGLAIRSKIADGSVKR-EDIFYTSKLWCTFFRPQLVQPALESS 102          

HSP 2 Score: 48.521 bits (114), Expect = 2.276e-14
Identity = 26/64 (40.62%), Postives = 38/64 (59.38%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED----IRSFDYEGVWEEMEKCQELGPTK 520
            A + +LK L L+Y+DLYL+HFP++L    T   K E+      + D   +WE MEKC++ G  K
Sbjct:   98 ALESSLKKLQLDYVDLYLIHFPMALKPGETPLPKDENGKVMFDTVDLCAIWEAMEKCKDAGLAK 161          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: DTDH_MUCMU (4-dihydromethyl-trisporate dehydrogenase OS=Mucor mucedo GN=tdh PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 2.277e-14
Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 1
Query:   76 LGSTGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLT 312
            L  TG  +P+ GFG  +    +  +E V  AIK GYR FD A  Y +E  +G  + +A+  GLV+  ++LFI +KLW T
Sbjct:    8 LNRTGDKMPIRGFGCWKIDTKDC-EETVYQAIKTGYRLFDGACDYGNEVEVGRGINKAINEGLVKR-EDLFIVTKLWNT 84          

HSP 2 Score: 41.9726 bits (97), Expect = 2.277e-14
Identity = 25/66 (37.88%), Postives = 32/66 (48.48%), Query Frame = 2
Query:  344 YKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPE-----DIRSFDYE-----GVWEEMEKCQELG 511
            + + LK  GLEY DLYL+HFPV L       V P      D +S  +E       W E+EK  + G
Sbjct:   95 FDRQLKDTGLEYFDLYLIHFPVPLQYVDPATVYPPGWYVGDAKSLQFEQSPIHECWAELEKIVDAG 160          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: ALDR_PIG (Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2)

HSP 1 Score: 61.6178 bits (148), Expect = 2.277e-14
Identity = 38/93 (40.86%), Postives = 50/93 (53.76%), Query Frame = 1
Query:   85 TGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            TG  +P++G GT + P  +   E V  AI LGYRH D A  Y +E  +G  L E L+ G V   ++LFI SKLW TD  +  V    Q   +D
Sbjct:    9 TGAKMPILGLGTWKSPPGKV-TEAVKVAIDLGYRHIDCAHVYQNENEVGLGLQEKLQ-GQVVKREDLFIVSKLWCTDHEKNLVKGACQTTLRD 99          

HSP 2 Score: 36.1946 bits (82), Expect = 2.277e-14
Identity = 23/67 (34.33%), Postives = 34/67 (50.75%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVS-------LILEATCPVKPEDIRSFDYEGVWEEMEKCQELGPTK 520
            A + TL+ L L+YLDLYL+H+P           L+    V P++    D+   WE ME+  + G  K
Sbjct:   92 ACQTTLRDLKLDYLDLYLIHWPTGFKPGKDPFPLDGDGNVVPDE---SDFVETWEAMEELVDEGLVK 155          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: ALD2_CRIGR (Aldose reductase-related protein 2 OS=Cricetulus griseus GN=AKR1B8 PE=1 SV=3)

HSP 1 Score: 61.2326 bits (147), Expect = 2.277e-14
Identity = 39/94 (41.49%), Postives = 52/94 (55.32%), Query Frame = 1
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            ST   +P+VG GT + P  +  KE V  AI  GYRH D A AY +E  +GEA+ E ++   V+  ++LFI SKLW T   R  +    QK   D
Sbjct:    8 STKAKMPIVGLGTWQSPPGQV-KEAVKVAIDAGYRHIDCAYAYYNEHEVGEAIQEKIKEKAVRR-EDLFIVSKLWPTCFERKLLKEAFQKTLTD 99          

HSP 2 Score: 36.5798 bits (83), Expect = 2.277e-14
Identity = 23/66 (34.85%), Postives = 34/66 (51.52%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED------IRSFDYEGVWEEMEKCQELGPTK 520
            A++KTL  L L+YLDLYL+H+P    L+    + P+D           +   WE ME+  + G  K
Sbjct:   92 AFQKTLTDLKLDYLDLYLIHWPQG--LQPGKELFPKDDQGNVLTSKITFLDAWEVMEELVDEGLVK 155          
The following BLAST results are available for this feature:
BLAST of CX290879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
ALD2_MOUSE6.148e-1542.55Aldose reductase-related protein 2 OS=Mus musculus... [more]
AK1C4_MACFA7.985e-1535.48Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
AK1CL_RAT7.989e-1542.31Aldo-keto reductase family 1 member C21 OS=Rattus ... [more]
AK1C1_HUMAN1.038e-1434.78Aldo-keto reductase family 1 member C1 OS=Homo sap... [more]
ALDR_HUMAN1.038e-1440.43Aldose reductase OS=Homo sapiens GN=AKR1B1 PE=1 SV... [more]
DIDH_RAT1.282e-1437.973-alpha-hydroxysteroid dehydrogenase OS=Rattus nor... [more]
AK1C4_MACFU2.276e-1434.41Aldo-keto reductase family 1 member C4 OS=Macaca f... [more]
DTDH_MUCMU2.277e-1440.514-dihydromethyl-trisporate dehydrogenase OS=Mucor ... [more]
ALDR_PIG2.277e-1440.86Aldose reductase OS=Sus scrofa GN=AKR1B1 PE=1 SV=2[more]
ALD2_CRIGR2.277e-1441.49Aldose reductase-related protein 2 OS=Cricetulus g... [more]

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Properties
Property NameValue
Genbank descriptionC03001C03Rv OF1 Citrus clementina cDNA clone C03001C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290879 ID=CX290879; Name=CX290879; organism=Citrus clementina; type=EST; length=553bp
TGGAATCATTGTGGTAATTTAGCTAGGCAAATACTGGATAGGAGGAAAAT
GAGGACGGCCATTCCAGAAGAACCCTTGGGCTCAACAGGGAAATCGATTC
CTCTTGTAGGCTTTGGAACCGTTGAATATCCATTGAATGAAGCCTTTAAA
GAACGCGTTCTGCATGCAATTAAGCTGGGGTATAGACACTTTGATACTGC
TGCAGCTTACCCATCCGAGCAACCTCTTGGCGAAGCATTAACTGAAGCTT
TACGTCTTGGCCTCGTTCAATCCGGCGACGAGCTTTTCATCACCTCAAAA
CTCTGGCTCACCGACTCCTATCGCGGCCGTGTCATCCCGGGCCTACAAAA
AAACTCTCAAGACTCTTGGATTGGAGTACCTTGATCTCTATCTAGTTCAT
TTTCCGGTAAGCTTGATTCTAGAGGCGACGTGTCCTGTGAAACCGGAGGA
TATTCGTTCATTTGACTATGAGGGTGTTTGGGAGGAAATGGAGAAATGTC
AAGAGCTAGGTCCTACAAAAAAAAAAAGGAGTAAGTAACTTTACATGCAA
GAA
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