CX290879

Overview
NameCX290879
Unique NameCX290879
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length553
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7096 contig Ccv1_Contig7096:7..557. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: XYL1_CANTE (NAD(P)H-dependent D-xylose reductase OS=Candida tenuis GN=XYL1 PE=1 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 3.116e-13
Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 1
Query:   49 MRTAIPEEPLGSTGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLW 306
            M  +IP+  L S+G  +P +GFG  +   N    E+V  AIK GYR FD A  Y +E+ +G+ +  A+  GLV+  +E+F+TSKLW
Sbjct:    1 MSASIPDIKL-SSGHLMPSIGFGCWKLA-NATAGEQVYQAIKAGYRLFDGAEDYGNEKEVGDGVKRAIDEGLVKR-EEIFLTSKLW 83          

HSP 2 Score: 35.039 bits (79), Expect = 3.116e-13
Identity = 23/73 (31.51%), Postives = 36/73 (49.32%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPE--------DIRSFDYEGV-----WEEMEKCQELGPTK 520
            A  KTL  L ++Y+DL+L+HFP++       P++ +        D  +F YE V     W+ +EK    G  K
Sbjct:   95 ALNKTLADLKVDYVDLFLIHFPIAF---KFVPIEEKYPPGFYCGDGNNFVYEDVPILETWKALEKLVAAGKIK 164          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: XYL1_PICGU (NADPH-dependent D-xylose reductase OS=Pichia guilliermondii GN=XYL1 PE=1 SV=2)

HSP 1 Score: 56.225 bits (134), Expect = 4.050e-13
Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 1
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLW 306
            ++G  +P VGFG  +        + + +AIK+GYR FD A  Y +E+ +GE +  AL  GLV + DELF+ SKLW
Sbjct:    6 NSGYEMPSVGFGCWKVD-KATCADTIYNAIKVGYRLFDGAEDYGNEKEVGEGINRALDEGLV-ARDELFVVSKLW 78          

HSP 2 Score: 37.3502 bits (85), Expect = 4.050e-13
Identity = 24/68 (35.29%), Postives = 33/68 (48.53%), Query Frame = 2
Query:  338 RAYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPE-----DIRSFDYEGV-----WEEMEKCQELG 511
            +A  +TL  L ++YLDL+L+HFP++          P      D   F YEGV     W  +EK  E G
Sbjct:   89 KALDRTLSDLKVDYLDLFLIHFPIAFKFVPFEEKYPPGFYCGDGDKFIYEGVPIIDTWRALEKMVEKG 156          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1A1_CRIGR (Alcohol dehydrogenase [NADP+] (Fragment) OS=Cricetulus griseus GN=AKR1A1 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 4.092e-13
Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 1
Query:  103 LVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            L+G GT +    +  K  + +A+ +GYRH D AA Y +E  +GEAL E +  G     +ELF+TSKLW T  +   V   L+K   D
Sbjct:    1 LIGLGTWKSNPGQV-KAAIKYALSVGYRHIDCAAVYGNEIEIGEALKENVGPGKAVPREELFVTSKLWNTKHHPEDVEAALRKTLAD 86          

HSP 2 Score: 35.039 bits (79), Expect = 4.092e-13
Identity = 25/64 (39.06%), Postives = 33/64 (51.56%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPED--IR--SFDYEGVWEEMEKCQELGPTK 520
            A +KTL  L LEYLDLYL+H+P +         K +D  IR  S  Y+  W+ +E     G  K
Sbjct:   79 ALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNDDGTIRYDSTHYKETWKALEALVAKGLVK 142          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: XYL1_KLULA (NAD(P)H-dependent D-xylose reductase OS=Kluyveromyces lactis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 6.824e-13
Identity = 34/103 (33.01%), Postives = 59/103 (57.28%), Query Frame = 1
Query:   55 TAIPEEPLGSTGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            T + E    + G+ +PLVG G  + P N+   +++  AIK+GYR FD A  Y +E+ +G+ +  A++ GLV+  ++L + SKLW +  +   V   L++   D
Sbjct:    2 TYLAETVTLNNGEKMPLVGLGCWKMP-NDVCADQIYEAIKIGYRLFDGAQDYANEKEVGQGVNRAIKEGLVKR-EDLVVVSKLWNSFHHPDNVPRALERTLSD 102          

HSP 2 Score: 31.9574 bits (71), Expect = 6.824e-13
Identity = 11/25 (44.00%), Postives = 20/25 (80.00%), Query Frame = 2
Query:  338 RAYKKTLKTLGLEYLDLYLVHFPVS 412
            RA ++TL  L L+Y+D++ +HFP++
Sbjct:   94 RALERTLSDLQLDYVDIFYIHFPLA 118          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: XYL1_CANSH (NAD(P)H-dependent D-xylose reductase OS=Candida shehatae GN=XYL1 PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 8.868e-13
Identity = 31/75 (41.33%), Postives = 48/75 (64.00%), Query Frame = 1
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLW 306
            + G  +P +GFG  +   + A  ++V +AIK GYR FD A  Y +EQ +GE +  A+  G+V + +E+F+TSKLW
Sbjct:   12 NNGLEMPSIGFGCWKLDKSTA-ADQVYNAIKAGYRLFDGAEDYGNEQEVGEGVKRAIDEGIV-TREEIFLTSKLW 84          

HSP 2 Score: 36.1946 bits (82), Expect = 8.868e-13
Identity = 23/70 (32.86%), Postives = 37/70 (52.86%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPE--------DIRSFDYEGV-----WEEMEKCQELG 511
            A  KTLK L ++Y+DL+L+HFP++       P++ +        D  +F YE V     W+ +EK  + G
Sbjct:   96 ALNKTLKDLKVDYVDLFLIHFPIAF---KFVPIEEKYPPGFYCGDGDNFVYEDVPILETWKALEKLVKAG 162          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: ALDX_SPOSA (Aldehyde reductase 1 OS=Sporobolomyces salmonicolor GN=ARI PE=1 SV=3)

HSP 1 Score: 52.7582 bits (125), Expect = 8.868e-13
Identity = 35/88 (39.77%), Postives = 50/88 (56.82%), Query Frame = 1
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGL 345
            +TG S+ LVG+GT +    E   + V  AI+ GYRH D A  Y ++  +G A+ EA   G+ +  ++LFITSKLW       +V P L
Sbjct:    8 NTGASLELVGYGTWQAAPGEV-GQGVKVAIETGYRHLDLAKVYSNQPEVGAAIKEA---GVKR--EDLFITSKLWNNSHRPEQVEPAL 89          

HSP 2 Score: 39.6614 bits (91), Expect = 8.868e-13
Identity = 26/69 (37.68%), Postives = 33/69 (47.83%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSL-----ILEATCPVKPEDIRSFDYE----GVWEEMEKCQELGPTK 520
            A   TLK LGLEYLDLYL+H+PV+      I +   P   +     D E      W+ M K  + G  K
Sbjct:   88 ALDDTLKELGLEYLDLYLIHWPVAFPPEGDITQNLFPKANDKEVKLDLEVSLVDTWKAMVKLLDTGKVK 156          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AK1C3_HUMAN (Aldo-keto reductase family 1 member C3 OS=Homo sapiens GN=AKR1C3 PE=1 SV=3)

HSP 1 Score: 51.2174 bits (121), Expect = 1.152e-12
Identity = 33/92 (35.87%), Postives = 53/92 (57.61%), Query Frame = 1
Query:   88 GKSIPLVGFGTV---EYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKN 354
            G  +P++GFGT    E P ++A +   L AI+ G+RH D+A  Y +E+ +G A+   +  G V+  +++F TSKLW T      V P L+ +
Sbjct:   13 GHFMPVLGFGTYAPPEVPRSKALEVTKL-AIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKR-EDIFYTSKLWSTFHRPELVRPALENS 102          

HSP 2 Score: 40.817 bits (94), Expect = 1.152e-12
Identity = 25/64 (39.06%), Postives = 34/64 (53.12%), Query Frame = 2
Query:  341 AYKKTLKTLGLEYLDLYLVHFPVSLIL-EATCPVKPEDIRSFDYEGV---WEEMEKCQELGPTK 520
            A + +LK   L+Y+DLYL+H P+SL   E   P        FD   +   WE MEKC++ G  K
Sbjct:   98 ALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDLCTTWEAMEKCKDAGLAK 161          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: XYL1_PACTA (NAD(P)H-dependent D-xylose reductase OS=Pachysolen tannophilus GN=XYL1 PE=1 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.152e-12
Identity = 37/94 (39.36%), Postives = 51/94 (54.26%), Query Frame = 1
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            + G+ IP +G G  +    E   + V  AIK GYR FD A  Y +E+ +GE +  A++ GLV+  D LFITSKLW     +  V   L K+  D
Sbjct:    9 NNGRKIPAIGMGCWKL---ENAADMVYAAIKEGYRLFDCACDYGNEKEVGEGINRAIKDGLVKRKD-LFITSKLWNNFHAKENVKKALMKSLSD 98          

HSP 2 Score: 33.8834 bits (76), Expect = 1.152e-12
Identity = 13/25 (52.00%), Postives = 18/25 (72.00%), Query Frame = 2
Query:  338 RAYKKTLKTLGLEYLDLYLVHFPVS 412
            +A  K+L    L+Y DLYL+HFP+S
Sbjct:   90 KALMKSLSDFNLDYFDLYLMHFPIS 114          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: XYL1_PICST (NAD(P)H-dependent D-xylose reductase OS=Pichia stipitis GN=XYL1 PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 1.943e-12
Identity = 32/94 (34.04%), Postives = 53/94 (56.38%), Query Frame = 1
Query:   82 STGKSIPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLTDSYRGRVIPGLQKNSQD 363
            ++G  +P VGFG  +  ++    E++  AIK GYR FD A  Y +E+ +G  + +A+  G+V+  ++LF+TSKLW    +   V   L +   D
Sbjct:    7 NSGYDMPAVGFGCWKVDVDTC-SEQIYRAIKTGYRLFDGAEDYANEKLVGAGVKKAIDEGIVKR-EDLFLTSKLWNNYHHPDNVEKALNRTLSD 98          

HSP 2 Score: 36.5798 bits (83), Expect = 1.943e-12
Identity = 22/68 (32.35%), Postives = 34/68 (50.00%), Query Frame = 2
Query:  338 RAYKKTLKTLGLEYLDLYLVHFPVSLILEATCPVKPEDI-----RSFDYEGV-----WEEMEKCQELG 511
            +A  +TL  L ++Y+DL+L+HFPV+          P         +FDYE V     W+ +EK  + G
Sbjct:   90 KALNRTLSDLQVDYVDLFLIHFPVTFKFVPLEEKYPPGFYCGKGDNFDYEDVPILETWKALEKLVKAG 157          
BLAST of CX290879 vs. ExPASy Swiss-Prot
Match: AKCL2_RAT (1,5-anhydro-D-fructose reductase OS=Rattus norvegicus GN=Akr1e2 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.946e-12
Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 1
Query:   97 IPLVGFGTVEYPLNEAFKERVLHAIKLGYRHFDTAAAYPSEQPLGEALTEALRLGLVQSGDELFITSKLWLT 312
            IP VG GT +    E   + V  AI LGYRHFD A  Y +E  +G  + E ++ G+V+  DELFI SKLW T
Sbjct:    4 IPTVGLGTWKASPGEV-TDAVKVAINLGYRHFDCAYLYHNESEVGMGIKEKIKEGVVKR-DELFIVSKLWCT 73          

HSP 2 Score: 33.4982 bits (75), Expect = 1.946e-12
Identity = 20/54 (37.04%), Postives = 28/54 (51.85%), Query Frame = 2
Query:  353 TLKTLGLEYLDLYLVHFPV-------SLILEATCPVKPEDIRSFDYEGVWEEME 493
            TL+ L L+YLDLYL+H+P+        + L+ +  V P      D    WE ME
Sbjct:   87 TLEALNLDYLDLYLIHWPMGFKPGDKDIPLDRSGKVIPSHTSFLD---TWEAME 137          
The following BLAST results are available for this feature:
BLAST of CX290879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
XYL1_CANTE3.116e-1341.86NAD(P)H-dependent D-xylose reductase OS=Candida te... [more]
XYL1_PICGU4.050e-1342.67NADPH-dependent D-xylose reductase OS=Pichia guill... [more]
AK1A1_CRIGR4.092e-1339.08Alcohol dehydrogenase [NADP+] (Fragment) OS=Cricet... [more]
XYL1_KLULA6.824e-1333.01NAD(P)H-dependent D-xylose reductase OS=Kluyveromy... [more]
XYL1_CANSH8.868e-1341.33NAD(P)H-dependent D-xylose reductase OS=Candida sh... [more]
ALDX_SPOSA8.868e-1339.77Aldehyde reductase 1 OS=Sporobolomyces salmonicolo... [more]
AK1C3_HUMAN1.152e-1235.87Aldo-keto reductase family 1 member C3 OS=Homo sap... [more]
XYL1_PACTA1.152e-1239.36NAD(P)H-dependent D-xylose reductase OS=Pachysolen... [more]
XYL1_PICST1.943e-1234.04NAD(P)H-dependent D-xylose reductase OS=Pichia sti... [more]
AKCL2_RAT1.946e-1247.221,5-anhydro-D-fructose reductase OS=Rattus norvegi... [more]

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Properties
Property NameValue
Genbank descriptionC03001C03Rv OF1 Citrus clementina cDNA clone C03001C03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290879 ID=CX290879; Name=CX290879; organism=Citrus clementina; type=EST; length=553bp
TGGAATCATTGTGGTAATTTAGCTAGGCAAATACTGGATAGGAGGAAAAT
GAGGACGGCCATTCCAGAAGAACCCTTGGGCTCAACAGGGAAATCGATTC
CTCTTGTAGGCTTTGGAACCGTTGAATATCCATTGAATGAAGCCTTTAAA
GAACGCGTTCTGCATGCAATTAAGCTGGGGTATAGACACTTTGATACTGC
TGCAGCTTACCCATCCGAGCAACCTCTTGGCGAAGCATTAACTGAAGCTT
TACGTCTTGGCCTCGTTCAATCCGGCGACGAGCTTTTCATCACCTCAAAA
CTCTGGCTCACCGACTCCTATCGCGGCCGTGTCATCCCGGGCCTACAAAA
AAACTCTCAAGACTCTTGGATTGGAGTACCTTGATCTCTATCTAGTTCAT
TTTCCGGTAAGCTTGATTCTAGAGGCGACGTGTCCTGTGAAACCGGAGGA
TATTCGTTCATTTGACTATGAGGGTGTTTGGGAGGAAATGGAGAAATGTC
AAGAGCTAGGTCCTACAAAAAAAAAAAGGAGTAAGTAACTTTACATGCAA
GAA
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