CX290880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA8_ARATH (Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.708e-28 Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+PL+ YCTLPA CLLTGKFI+P +SN AS++F+GLFISI T +LE++W GV I+D WRNEQ WVIGG S+H F G Sbjct: 766 TSLPLVAYCTLPAICLLTGKFIIPTLSNLASMLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQG 846
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.534e-27 Identity = 53/81 (65.43%), Postives = 63/81 (77.78%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPL+ YC LPA CLLT KFI+P IS +ASL FI LF+SI TGILE++W GV I++WWRNEQ WVIGG S+H F + G Sbjct: 809 TSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQG 889
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.321e-27 Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPL+ YCT+PA CLLTGKFI+P I+N+AS+ F+ LF+SI AT ILE++W GV I+D WRNEQ WVIGG S+H F G Sbjct: 830 TSIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQG 910
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CESAA_ARATH (Probable cellulose synthase A catalytic subunit 10 [UDP-forming] OS=Arabidopsis thaliana GN=CESA10 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.240e-26 Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSIPL+ YC LPAFCL+T FI+PEISN ASL F+ LF SI A+ ILE++W V ++DWWRNEQ WVIGG S+H F G Sbjct: 849 TSIPLLAYCMLPAFCLITNTFIIPEISNLASLCFMLLFASIYASAILELKWSDVALEDWWRNEQFWVIGGTSAHLFAVFQG 929
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CSLD1_ARATH (Cellulose synthase-like protein D1 OS=Arabidopsis thaliana GN=CSLD1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 2.377e-17 Identity = 35/81 (43.21%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSI L+VYC LPA CL +GKFIV + + + + +++ +LE++W G+G+++WWRNEQ W+IGG S+H + G Sbjct: 821 TSIFLVVYCFLPALCLFSGKFIVQSLDIHFLSYLLCITVTLTLISLLEVKWSGIGLEEWWRNEQFWLIGGTSAHLAAVVQG 901
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CSLD4_ARATH (Cellulose synthase-like protein D4 OS=Arabidopsis thaliana GN=CSLD4 PE=2 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.482e-16 Identity = 35/81 (43.21%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+ LI+YC LPAF L +G+FIV +S + + + I + +LE++W G+G+++WWRNEQ W+I G SSH + + G Sbjct: 889 TSLFLILYCFLPAFSLFSGQFIVRTLSISFLVYLLMITICLIGLAVLEVKWSGIGLEEWWRNEQWWLISGTSSHLYAVVQG 969
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CSLD3_ORYSJ (Cellulose synthase-like protein D3 OS=Oryza sativa subsp. japonica GN=CSLD3 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 7.646e-16 Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSI L+VYC +PA L +G FIV ++ + + I++ A GILE++W G+ ++DWWRNEQ W+I G S+H + + G Sbjct: 927 TSIFLLVYCFIPALSLFSGFFIVQKLDIAFLCYLLTMTITLVALGILEVKWSGIELEDWWRNEQFWLISGTSAHLYAVVQG 1007
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CSLD2_ARATH (Cellulose synthase-like protein D2 OS=Arabidopsis thaliana GN=CSLD2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.225e-15 Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIVPEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TSI LIVYC LPA L +G+FIV ++ + + + I++ +LE++W G+ +++WWRNEQ W+IGG S+H L G Sbjct: 928 TSIFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLIISITLCLLALLEIKWSGISLEEWWRNEQFWLIGGTSAHLAAVLQG 1008
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSJ (Cellulose synthase-like protein D5 OS=Oryza sativa subsp. japonica GN=CSLD5 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.905e-15 Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIV----PEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+ LI+YC LPA L +G+FIV P +Y L+ I L + +LE++W G+G+++WWRNEQ WVIGG S+H L G Sbjct: 797 TSLFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLMLLC----LLEVKWSGIGLEEWWRNEQFWVIGGTSAHLAAVLQG 877
BLAST of CX290880 vs. ExPASy Swiss-Prot
Match: CSLD5_ORYSI (Putative cellulose synthase-like protein D5 OS=Oryza sativa subsp. indica GN=CSLD5 PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.905e-15 Identity = 39/85 (45.88%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 2 TSIPLIVYCTLPAFCLLTGKFIV----PEISNYASLVFIGLFISIAATGILEMQWGGVGIDDWWRNEQLWVIGGASSHFFCSLPG 244 TS+ LI+YC LPA L +G+FIV P +Y L+ I L + +LE++W G+G+++WWRNEQ WVIGG S+H L G Sbjct: 797 TSLFLIMYCLLPALSLFSGQFIVATLDPTFLSYLLLITITLMLLC----LLEVKWSGIGLEEWWRNEQFWVIGGTSAHLAAVLQG 877 The following BLAST results are available for this feature:
BLAST of CX290880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290880 ID=CX290880; Name=CX290880; organism=Citrus clementina; type=EST; length=251bpback to top |