CX290883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3_SCHPO (Probable proteasome subunit beta type-3 OS=Schizosaccharomyces pombe GN=SPCC63.12c PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 1.639e-34 Identity = 67/121 (55.37%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 58 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMDS 420 EYNG + VAM GKNC AIASD RLGVQ ++ +F ++ + D+ ++GL+GLATD QTLY+ ++ LY+ REER ++P+TFA+LVS+ LYEKRFGPYF P +AG+S+++ PFIC DS Sbjct: 5 EYNGGSCVAMAGKNCVAIASDLRLGVQSISLTNNFPKVFAMGDKTYLGLTGLATDVQTLYELFRYKVNLYKFREERQIQPKTFANLVSSTLYEKRFGPYFSFPVVAGVSNDNTPFICGFDS 125
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3_DROME (Proteasome subunit beta type-3 OS=Drosophila melanogaster GN=Prosbeta3 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 2.003e-32 Identity = 64/120 (53.33%), Postives = 89/120 (74.17%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDED-KPFICTMD 417 YNG +VAM GK+C AIA+D R G+Q QTI+TDF+++ I R+F+GL+GL TD T+ RL+FR LY+ RE R+M P+ F++++S+ LYE RFGPYF +P +AGL + +PFIC MD Sbjct: 6 YNGGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPKTMEPFICNMD 125
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3_CAEEL (Proteasome subunit beta type-3 OS=Caenorhabditis elegans GN=pbs-3 PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 6.445e-31 Identity = 55/120 (45.83%), Postives = 88/120 (73.33%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMDS 420 Y G +VAM G C IASD R+G Q+ TIATD +++ K+ D++++GL+G +D++T+ ++++FR LY+LRE R++KP+ + ++S L Y+ RFG YF +P +AGL D +KP+IC MD+ Sbjct: 6 YTGGTVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFRKNLYELRENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNKPYICCMDT 125
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3_TRYBB (Proteasome subunit beta type-3 OS=Trypanosoma brucei brucei GN=PSB3 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.242e-26 Identity = 54/120 (45.00%), Postives = 84/120 (70.00%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDE-DKPFICTMD 417 Y+G + +AM GK CF + SD RLG QL+TI+ + ++ I+D + +GL+GL TD QT Q++ FR ++Y+LREERD+ + FA+LVS++LYE RFGP+F +P I + + + ++C D Sbjct: 6 YSGGSCLAMAGKECFVVISDNRLGEQLKTISMEVPKLHVINDGIVMGLTGLRTDQQTFAQKVNFRTEMYKLREERDINGKAFAALVSSMLYEARFGPWFVEPVIGTIDRKTGEVYLCATD 125
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3_YEAST (Proteasome component PUP3 OS=Saccharomyces cerevisiae GN=PUP3 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 6.901e-25 Identity = 58/119 (48.74%), Postives = 80/119 (67.23%), Query Frame = 1 Query: 64 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGL-SDEDKPFICTMD 417 NG +VAM GK+C AIA D RLG Q ++ F++I + +F+G++GLATD TL + ++ LY+L+EER ++PETF LVS+ LYE+RFGPYF P +AG+ S KPFI D Sbjct: 8 NGGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFH-YGHVFLGITGLATDVTTLNEMFRYKTNLYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFD 125
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3_GIALA (Proteasome subunit beta type-3 OS=Giardia lamblia GN=PRSBETA3 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 1.537e-24 Identity = 51/122 (41.80%), Postives = 81/122 (66.39%), Query Frame = 1 Query: 58 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIAT-DFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMDS 420 EYNGSAL+ + G +C A+A+D+RLG QT+ + +RI ++ +GL+GL TD T Y+++ + LY L+E+R+++P A ++S+ LY+ RFGPYF P IAG + KP++ MD+ Sbjct: 6 EYNGSALIGIKGXDCVALAADKRLGCSYQTLTIGNEERIFRLSQSCLLGLAGLQTDVLTTYRQIRMKSNLYHLQEDREIRPRATAKMISSFLYKHRFGPYFISPIIAGFEADGKPYLGAMDT 127
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB1_ARATH (Proteasome subunit beta type-1 OS=Arabidopsis thaliana GN=PBF1 PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 7.158e-14 Identity = 40/119 (33.61%), Postives = 61/119 (51.26%), Query Frame = 1 Query: 64 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMDS 420 NG VA+ G + IA+D R+ ++ D+ +I K+ DR + SG D + L + L RH +YQ + + M A L+S LY KRF PY+ + GL +E K + T D+ Sbjct: 14 NGGTCVAIAGSDYCVIAADTRMSTGYSILSRDYSKIHKLADRAVLSSSGFQADVKALQKVLKSRHLIYQHQHNKQMSCPAMAQLLSNTLYFKRFFPYYAFNVLGGLDEEGKGCVFTYDA 132
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB1_ORYSJ (Proteasome subunit beta type-1 OS=Oryza sativa subsp. japonica GN=PBF1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.915e-13 Identity = 40/121 (33.06%), Postives = 60/121 (49.59%), Query Frame = 1 Query: 58 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMDS 420 E NG VA+ G + +A+D RL V + D +I ++ D+ + SG D + L++ L R LYQ + + M A L+S LY KRF PY+ + GL E K + T D+ Sbjct: 10 ENNGGTCVAIAGADYCVVAADTRLSVGYNILTRDHSKICELADKCALASSGFQGDIKALHKNLAARELLYQHQHNKRMSCPAMAQLLSNTLYYKRFFPYYAFNVLGGLDSEGKGCVFTYDA 130
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB1_PETHY (Proteasome subunit beta type-1 OS=Petunia hybrida GN=PBF1 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.350e-12 Identity = 38/119 (31.93%), Postives = 58/119 (48.74%), Query Frame = 1 Query: 64 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMDS 420 NG VA+ G + IA+D R+ + D+ +I K+ D+ + SG D + L + L RH +YQ + + M L+S LY KRF PY+ + GL E K + T D+ Sbjct: 14 NGGTCVAVAGADYCVIAADTRMSTGYNILTRDYSKIIKLADKCVMASSGFQADVRALQKVLASRHLIYQHQHNKQMSCPAMGQLLSNTLYYKRFFPYYSFNVLGGLDSEGKGCVFTYDA 132
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB1_SCHPO (Probable proteasome subunit beta type-1 OS=Schizosaccharomyces pombe GN=pam1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.130e-12 Identity = 45/119 (37.82%), Postives = 60/119 (50.42%), Query Frame = 1 Query: 64 NGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQ-RISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMD 417 NG VA+ G +A D R V I T FQ R+ ++ D L IG SG D+ L +R+ R LY ER M ++ A +V LLY KRF PY+ +AG+ E K I + D Sbjct: 12 NGGTTVAIAGDGFAILAGDTR-SVNGYNINTRFQPRVHEVGDDLVIGASGFEADALALVKRIQQRIDLYHDNHERKMSAQSCACMVRTLLYGKRFFPYYVYTTVAGIDKEGKGEIYSFD 129 The following BLAST results are available for this feature:
BLAST of CX290883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290883 ID=CX290883; Name=CX290883; organism=Citrus clementina; type=EST; length=421bpback to top |