CX290883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB1_HUMAN (Proteasome subunit beta type-1 OS=Homo sapiens GN=PSMB1 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11 Identity = 37/119 (31.09%), Postives = 61/119 (51.26%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMD 417 +NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL + + R K+Y+ + M A+++S +LY +RF PY+ I GL +E K + + D Sbjct: 35 FNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFD 153
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB1_MOUSE (Proteasome subunit beta type-1 OS=Mus musculus GN=Psmb1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11 Identity = 37/119 (31.09%), Postives = 61/119 (51.26%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMD 417 +NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL + + R K+Y+ + M A+++S +LY +RF PY+ I GL +E K + + D Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFD 152
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB1_BOVIN (Proteasome subunit beta type-1 OS=Bos taurus GN=PSMB1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.493e-11 Identity = 37/119 (31.09%), Postives = 61/119 (51.26%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMD 417 +NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL + + R K+Y+ + M A+++S +LY +RF PY+ I GL +E K + + D Sbjct: 35 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFD 153
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB1_RAT (Proteasome subunit beta type-1 OS=Rattus norvegicus GN=Psmb1 PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 1.949e-11 Identity = 37/119 (31.09%), Postives = 61/119 (51.26%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMD 417 +NG ++A+ G++ +ASD RL D + K+ D+ IG SG D TL + + R K+Y+ + M A+++S +LY +RF PY+ I GL +E K + + D Sbjct: 34 FNGGTVLAIAGEDFSIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIEGLDEEGKGAVYSFD 152
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB1B_CARAU (Proteasome subunit beta type-1-B OS=Carassius auratus GN=psmb1-B PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.408e-11 Identity = 36/119 (30.25%), Postives = 61/119 (51.26%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMD 417 +NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL + + R K+Y+ + M A+++S +LY +RF PY+ I GL +E + + + D Sbjct: 31 FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFD 149
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB1A_CARAU (Proteasome subunit beta type-1-A OS=Carassius auratus GN=psmb1-A PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.408e-11 Identity = 36/119 (30.25%), Postives = 61/119 (51.26%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMD 417 +NG ++A+ G++ +ASD RL + D + K+ D IG SG D TL + + R K+Y+ + M A+++S +LY +RF PY+ I GL +E + + + D Sbjct: 32 FNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFD 150 The following BLAST results are available for this feature:
BLAST of CX290883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290883 ID=CX290883; Name=CX290883; organism=Citrus clementina; type=EST; length=421bpback to top |