CX290916

Overview
NameCX290916
Unique NameCX290916
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14735 contig Ccv1_Contig14735:12..553. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.069e-29
Identity = 73/155 (47.10%), Postives = 98/155 (63.23%), Query Frame = 3
Query:   84 GSPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGG--PSWAVPLGRRDSRTANRALANQNLPGPSNSLDE 542
            G     QL   FYS  C NV NI+  V+ +AF  D  I  ++IRL+FHDCF +GCDAS+LLD +N   SEK A+P N S RG+EVID++K+AVEK C RVVSCADI+ +A    V L+ G    + +P GR D + ++  L   +LP P  ++ E
Sbjct:   21 GHGCYGQLRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSN---SEKKASP-NLSVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLV--DLPSPKMTVAE 169          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER25_ARATH (Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.396e-29
Identity = 69/144 (47.92%), Postives = 89/144 (61.81%), Query Frame = 3
Query:  105 LSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 536
            L   +YS++CP   +I+   ++  F SD  I   L+RLHFHDCFV GCD S+L+   +   +E+ A PN    RG EVID+ KA +E  C  VVSCADIL +AA  SV LS GPSW VP GR+D R  + A    NLP P +S+
Sbjct:   29 LKNGYYSTSCPKAESIVRSTVESHFDSDPTISPGLLRLHFHDCFVQGCDGSVLIKGKS---AEQAALPNLG-LRGLEVIDDAKARLEAVCPGVVSCADILALAARDSVDLSDGPSWRVPTGRKDGR-ISLATEASNLPSPLDSV 167          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 2.382e-29
Identity = 71/134 (52.99%), Postives = 87/134 (64.93%), Query Frame = 3
Query:  141 VLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 536
            V + +  V+  A  ++ R+GASLIRLHFHDCFVDGCD  ILLD  N T   E+ + PN NSARG+EVI   K +V   C  + VSCADIL IAA  SVA  GG ++ V LGR D+RTAN   A   LP P ++L
Sbjct:   81 VFSAVRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNL 214          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.110e-29
Identity = 67/144 (46.53%), Postives = 89/144 (61.81%), Query Frame = 3
Query:  105 LSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 536
            L   FYS TCP +  I++ V+  A +    +GA L+R+ FHDCFV GCD S+LLD  N    EK A PN  S RGF +ID+ KAA+EK C  +VSC+DIL + A  ++    GPSW V  GRRD R +N  +   NLP P +++
Sbjct:   26 LKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNN-QGEKSAVPNL-SLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVSN--INEVNLPSPFDNI 165          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 4.062e-29
Identity = 65/141 (46.10%), Postives = 92/141 (65.25%), Query Frame = 3
Query:  117 FYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLD 539
            FYSSTCP   +I++  ++  F SD  +   ++R+HFHDCFV GCD SIL++ +   D+E+ A PN N  +GF+VI++ K  +E  C  VVSCADIL +AA  SV  + G +W+VP GRRD R +  A A  +LP   +S+D
Sbjct:   36 FYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGS---DAERTAIPNRN-LKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGRVSRAADAG-DLPAFFDSVD 171          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 6.929e-29
Identity = 71/149 (47.65%), Postives = 97/149 (65.10%), Query Frame = 3
Query:   93 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLD 539
            S AQL   FYS TCP+  +I+ DV+++A ++D    A L+RL FHDCFV+GCD SIL+      D E+FAA N   A GF+VID  K+ +E+ C  VVSCADI+ +AA  ++A + GP + VP GRRD   AN   A +NLP   +S++
Sbjct:   20 SAAQLQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGN-DDERFAAGNAGVA-GFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHA-KNLPDVQDSIN 165          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.633e-28
Identity = 72/152 (47.37%), Postives = 95/152 (62.50%), Query Frame = 3
Query:   84 GSPSQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 536
            G PS  +L        C  V + +++V+  A +++ R+GASLIRL FHDCFVDGCDA +LL+ T T   E+ AA NNNS RGF VI+  K  V+     + VSCADIL+IAA  S     G ++ V LGR+D+RTAN   AN  L GP+ +L
Sbjct:   58 GKPSGGKLG----DEAC--VFSAVKEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENL 203          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.633e-28
Identity = 63/140 (45.00%), Postives = 85/140 (60.71%), Query Frame = 3
Query:  105 LSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGP 524
            L   +Y S CP    I+  V  +  S    + A L+R+HFHDCFV GCD S+LL S    D+E+ A PN  + +G+EV+D  K A+E+ C  ++SCAD+L + A  +VA+ GGP W VPLGRRD R +    A  NLP P
Sbjct:   26 LDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKN-DAERDAVPNL-TLKGYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSP 163          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 3.439e-28
Identity = 66/151 (43.71%), Postives = 91/151 (60.26%), Query Frame = 3
Query:   87 SPSQAQ-LSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 536
            +P+  Q L   FY   CP    I++  + +A  +D  I A L+R+ FHDCFV GC+ S+LL+  N  D EK + PN  + RGFE+IDN+KAA+EK C  +VSC+D+L + A  ++    GPSW V  GRRD    N   A  NLP P N++
Sbjct:   25 APTNVQGLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKKD-EKNSIPNL-TLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNI 173          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.866e-28
Identity = 67/140 (47.86%), Postives = 89/140 (63.57%), Query Frame = 3
Query:  117 FYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 536
            +Y S C NV +I+  V++  + ++      ++R+HFHDCFV GCDAS+LL   N   SE+ A PN  S RGF VI+  K  +E AC R VSCADIL +AA   V L+GGP W VPLGR D R +    +N  LPGP++S+
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPN---SERTAIPNL-SLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRIS--LASNVILPGPTDSV 171          
The following BLAST results are available for this feature:
BLAST of CX290916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER60_ARATH1.069e-2947.10Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER25_ARATH1.396e-2947.92Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=... [more]
PERX_SOLTU2.382e-2952.99Suberization-associated anionic peroxidase OS=Sola... [more]
PER27_ARATH3.110e-2946.53Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PERN1_TOBAC4.062e-2946.10Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER13_ARATH6.929e-2947.65Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PERA_IPOBA2.633e-2847.37Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER1_ARATH2.633e-2845.00Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER56_ARATH3.439e-2843.71Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER70_ARATH5.866e-2847.86Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC03001F12Rv OF1 Citrus clementina cDNA clone C03001F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290916 ID=CX290916; Name=CX290916; organism=Citrus clementina; type=EST; length=542bp
TAGAGAAGTAGTAACTCTTAGCCAAAATGGCTTCACTTCGTTATCTTCTT
GCAGCAGCTCTTGTTGTTGCTTTTGTGCTTGAGGGATCACCATCTCAAGC
TCAACTTTCTCCATCTTTTTATTCTTCCACATGCCCTAATGTATTGAACA
TTATCGAGGATGTGCTTAAGAAAGCGTTCTCGTCCGATATCCGGATCGGT
GCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGA
TGCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTG
CTGCGCCAAATAATAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATG
AAAGCTGCCGTTGAAAAGGCATGTCGAAGGGTTGTTTCCTGCGCTGATAT
TCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCAT
GGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTT
GCAAATCAGAATCTTCCAGGACCATCTAATTCTCTTGATGAG
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