CX290916

Overview
NameCX290916
Unique NameCX290916
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length542
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14735 contig Ccv1_Contig14735:12..553. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 123.25 bits (308), Expect = 7.661e-28
Identity = 61/147 (41.50%), Postives = 90/147 (61.22%), Query Frame = 3
Query:   96 QAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 536
            ++ L   +Y  +CP    II   ++  ++    +   +IRL FHDCF++GCDAS+LLD+     SEK A+PN  S +GF+VID +K+ +E  C  VVSCAD+L +AA  +V ++GGP + +  GR+DS  A R  A   LP P  +L
Sbjct:   65 RSYLHYDYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNL-SLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATL 210          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.001e-27
Identity = 66/151 (43.71%), Postives = 92/151 (60.93%), Query Frame = 3
Query:   99 AQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVEK--ACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDE 542
            AQLS  FYS TCPNV  I+ + ++K          + +RL FHDCFV+GCDAS+++ ST    +EK    N + A  GF+V+   K A++   +CR  VSCADILT+A    V  +GGPS+ V LGR D   +  +    NLPGPS+++D+
Sbjct:   25 AQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDK 175          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.307e-27
Identity = 66/153 (43.14%), Postives = 93/153 (60.78%), Query Frame = 3
Query:   93 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVEKA--CRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDE 542
            S AQL   FY+ TCPNV  I+ + ++K          + +RL+FHDCFV+GCDAS+++ STNT  +EK    N + A  GF+ +   K AV+    CR  VSCADILT+A    V L+GGP +AV LGRRD  +++ +     LP P+  L++
Sbjct:   23 SSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQ 175          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.911e-27
Identity = 65/148 (43.92%), Postives = 94/148 (63.51%), Query Frame = 3
Query:   84 GSPSQAQ-LSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGP 524
            G P  A+ LS ++Y  +CP    I+++ +  A  +D  + A LIR+ FHDCF++GCDASILLDST    +EK  +P N S RG+E+ID+ K  +E  C  VVSCADI+ +AA  +V  +GGP + +P GR D +  ++    +NLP P
Sbjct:   18 GFPFHARGLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEK-DSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGK-RSKIEDTRNLPSP 163          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 6.486e-27
Identity = 61/133 (45.86%), Postives = 84/133 (63.16%), Query Frame = 3
Query:  141 VLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSL 536
            V + +++++  A +++ R+GASLIRLHFHDCFVDGCD  ILL+ T     E+ A  N+NS RGF VID  K   +  C    VSCAD+L IAA  +       ++ + LGR+D+RTAN   AN  LP P ++L
Sbjct:   72 VFSAVKEIVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNL 204          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 8.470e-27
Identity = 64/145 (44.14%), Postives = 86/145 (59.31%), Query Frame = 3
Query:   93 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGP 524
            S AQLS ++Y+STCP+V  I++  +   F   +    + +R+ FHDCFV+GCDAS+ + S N  D+EK A  N + A  GF+ +   K AVE  C  VVSCADIL +AA   V L GGP + V LGRRD   +  +     LP P
Sbjct:   28 SNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENE-DAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEP 171          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.445e-26
Identity = 64/151 (42.38%), Postives = 92/151 (60.93%), Query Frame = 3
Query:   99 AQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSA-RGFEVIDNMKAAVE--KACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDE 542
            AQL  +FY ++CPNV  I++ V+++          + +RL FHDCFV+GCDAS+++ ST T  +EK    N + A  GF+V+   K A++   +C+  VSCADIL +A    V  + GPS+AV LGR D   +  A  N NLPGP+N + E
Sbjct:   25 AQLKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTE 175          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.887e-26
Identity = 63/151 (41.72%), Postives = 94/151 (62.25%), Query Frame = 3
Query:   93 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDE 542
            +Q++L+ +FYS TCP  L+II D +     ++    A++IRL FHDCF +GCDAS+L+ ST    +E+ ++ N +    GF+VI   K A+E AC   VSC+DI+++A    +   GGP + V LGRRDSRT+  +L    LP PS  + +
Sbjct:   17 AQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISK 167          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.465e-26
Identity = 63/150 (42.00%), Postives = 87/150 (58.00%), Query Frame = 3
Query:   93 SQAQLSPSFYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVEKACRRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPSNSLDE 542
            S A LS +FY+S+C     ++ + ++ A SSD  I   L+RL FHDCFV GCDAS+L+   +T  S+    P N S  GF VID  K A+E  C   VSCADI+ +AA  +V  +GGP   +P GRRD + +  A    N+     +LD+
Sbjct:   25 SSANLSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQGNSTEKSD----PGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQ 170          
BLAST of CX290916 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.465e-26
Identity = 66/156 (42.31%), Postives = 93/156 (59.62%), Query Frame = 3
Query:   81 EGSPSQAQLSPS----FYSSTCPNVLNIIEDVLKKAFSSDIRIGASLIRLHFHDCFVDGCDASILLDSTNTIDSEKFAAPN-NNSARGFEVIDNMKAAVEKAC-RRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRT-ANRALANQNLPGPS 527
            +G+  Q  L+P     FY  +CP   +I+   ++ A   D+ + A L+RLHFHDCFV GCDAS+LLD + T   E+ A PN       F+ I+++   + K C   VVSC+D+L +AA  SV +SGGPS+ VPLGRRDS + A +      LP P+
Sbjct:   29 DGNARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTAFKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPT 184          
The following BLAST results are available for this feature:
BLAST of CX290916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER48_ARATH7.661e-2841.50Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER35_ARATH1.001e-2743.71Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER51_ARATH1.307e-2743.14Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER47_ARATH2.911e-2743.92Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PERN_IPOBA6.486e-2745.86Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER55_ARATH8.470e-2744.14Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER73_ARATH1.445e-2642.38Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER31_ARATH1.887e-2641.72Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER46_ARATH2.465e-2642.00Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER1_SORBI2.465e-2642.31Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]

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Properties
Property NameValue
Genbank descriptionC03001F12Rv OF1 Citrus clementina cDNA clone C03001F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290916 ID=CX290916; Name=CX290916; organism=Citrus clementina; type=EST; length=542bp
TAGAGAAGTAGTAACTCTTAGCCAAAATGGCTTCACTTCGTTATCTTCTT
GCAGCAGCTCTTGTTGTTGCTTTTGTGCTTGAGGGATCACCATCTCAAGC
TCAACTTTCTCCATCTTTTTATTCTTCCACATGCCCTAATGTATTGAACA
TTATCGAGGATGTGCTTAAGAAAGCGTTCTCGTCCGATATCCGGATCGGT
GCCAGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTGATGGGTGTGA
TGCATCGATTTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTTG
CTGCGCCAAATAATAATTCGGCGAGGGGTTTTGAAGTTATTGATAACATG
AAAGCTGCCGTTGAAAAGGCATGTCGAAGGGTTGTTTCCTGCGCTGATAT
TCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCAT
GGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCTT
GCAAATCAGAATCTTCCAGGACCATCTAATTCTCTTGATGAG
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