CX290923
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 3.431e-16 Identity = 48/113 (42.48%), Postives = 65/113 (57.52%), Query Frame = 2 Query: 62 NSVADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEF---GRTDT-KREVAAFFAHVTHETT-------------DFCFVEEISKTNP-YCTPTPQYPCANGKFY 343 + VA +++P FD + ++ C KGFYT DAF++A ++YP+F G DT KREVAAF A +HETT +CF EE + P YC P P++PCA GK Y Sbjct: 74 SGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKY 186
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 4.481e-16 Identity = 45/113 (39.82%), Postives = 66/113 (58.41%), Query Frame = 2 Query: 59 QNSVADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFY 343 + SV+ +V+ FD + ++ C+ KGFYT DAF++A +++P FG T + KREVAAF A +HETT +CF +E ++ YCTP+ Q+PCA GK Y Sbjct: 22 RGSVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRY 134
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.853e-16 Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 2 Query: 68 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFY 343 + +++ FD +K++ C KGFYT DAF++A S+P FG T + KRE+AAF +HETT +CF++E + ++ YC P+P+YPCA GK Y Sbjct: 2 IEKIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSY 111
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.853e-16 Identity = 45/110 (40.91%), Postives = 62/110 (56.36%), Query Frame = 2 Query: 68 VADLVTPEFF-DGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT-DT---KREVAAFFAHVTHETT-------------DFCFVEEISKTNPYCTPTPQYPCANGKFY 343 + L+T F D +K++ +C GKGFYT DAFI+A ++P FG T DT KRE+AAF A +HETT +C++ E YC P+ Q+PCA G+ Y Sbjct: 65 IGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKY 174
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.304e-15 Identity = 42/102 (41.18%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 89 EFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT-DT---KREVAAFFAHVTHETT-------------DFCFVEEISKTNPYCTPTPQYPCANGKFY 343 +F D +K++ C +GFYT DAFI+A S+P FG T DT K+E+AAFF +HETT +CF +E + ++ YC+P+ ++PCA+GK Y Sbjct: 79 QFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSY 180
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI1_HORVU (26 kDa endochitinase 1 OS=Hordeum vulgare PE=2 SV=4) HSP 1 Score: 81.6481 bits (200), Expect = 1.304e-15 Identity = 47/110 (42.73%), Postives = 64/110 (58.18%), Query Frame = 2 Query: 68 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRT---DT-KREVAAFFAHVTHETTD-------------FCFVEEISKTNPYCTPTPQYPCANGKFY 343 V+ +V+ FD + ++ C+ KGFYT DAF++A S++ FG T DT KREVAAF A +HETT +CF +E T+ YCTP+ Q+PCA GK Y Sbjct: 77 VSSIVSRALFDRMLLHRNDGACQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQWPCAPGKSY 186
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.794e-15 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = 2 Query: 89 EFFDGIKNQAPATCEGKGFYTRDAFISALSSYPEFGRT-DT---KREVAAFFAHVTHETT-------------DFCFVEEISKTNPYCTPTPQYPCANGKFY 343 +F D +K++ A C +GFYT +AFI+A S+P FG T DT K+EVAAFF +HETT +CF +E + + YC P+ +PCA+GK Y Sbjct: 94 QFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRY 195
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHIC_SECCE (Basic endochitinase C OS=Secale cereale GN=rscc PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.955e-15 Identity = 43/111 (38.74%), Postives = 63/111 (56.76%), Query Frame = 2 Query: 65 SVADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFGRTDT----KREVAAFFAHVTHETT-------------DFCFVEEISKTNPYCTPTPQYPCANGKFY 343 SV+ +++ FD + ++ C+ KGFYT DAF++A +++P FG T + KR+VAAF A +HETT +CF +E YCTP+ Q+PCA GK Y Sbjct: 24 SVSSIISHAQFDRMLLHRNDGACQAKGFYTYDAFVAAANAFPGFGATGSTDARKRDVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGAAADYCTPSAQWPCAPGKRY 134
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.955e-15 Identity = 42/110 (38.18%), Postives = 62/110 (56.36%), Query Frame = 2 Query: 68 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFG----RTDTKREVAAFFAHVTHETT-------------DFCFVEEISKTNPYCTPTPQYPCANGKFY 343 + +++ FD +K++ C+GKGFY+ +AFI+A S+P FG T KRE+AAFFA +HETT +C++ E YCTP+ Q+PCA G+ Y Sbjct: 75 LGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKY 184
BLAST of CX290923 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 4.955e-15 Identity = 42/110 (38.18%), Postives = 62/110 (56.36%), Query Frame = 2 Query: 68 VADLVTPEFFDG-IKNQAPATCEGKGFYTRDAFISALSSYPEFG----RTDTKREVAAFFAHVTHETT-------------DFCFVEEISKTNPYCTPTPQYPCANGKFY 343 + +++ FD +K++ C+GKGFY+ +AFI+A S+P FG T KRE+AAFFA +HETT +C++ E YCTP+ Q+PCA G+ Y Sbjct: 80 LGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKY 189 The following BLAST results are available for this feature:
BLAST of CX290923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290923 ID=CX290923; Name=CX290923; organism=Citrus clementina; type=EST; length=344bpback to top |